RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 LYRM4Q9HD34 91 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 C20orf141Q9NUB4 165 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 KANTRA0A1W2PQU2 76 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 GPRIN2O60269 458 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 SLC43A1O75387 559 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 AMY2AP04746 511 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 AKR1D1P51857 326 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 BTG2P78543 158 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 PRSS53Q2L4Q9 553 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 CDNFQ49AH0 187 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 FBXO42Q6P3S6 717 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 PLXDC1Q8IUK5 500 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 SLC35F3Q8IY50 421 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 INO80EQ8NBZ0 244 aaPredicted RBP11.84□□□□□ -0.51
MSH6-215ENST00000622629 OR13C3Q8NGS6 347 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 NXPE2Q96DL1 559 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 METTL17Q9H7H0 456 aaPredicted RBP11.84□□□□□ -0.51
MSH6-215ENST00000622629 KCND3Q9UK17 655 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 TRPM7Q96QT4 1865 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 ACOT7O00154 380 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 TBX19O60806 448 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 GATBO75879 557 aaKnown RBP11.84□□□□□ -0.51
MSH6-215ENST00000622629 UBL3O95164 117 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 MLC1Q15049 377 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 POU4F3Q15319 338 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 TP53I13Q8NBR0 393 aaPredicted RBP11.84□□□□□ -0.51
MSH6-215ENST00000622629 ELOVL3Q9HB03 270 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 ACOXLQ9NUZ1 547 aa11.84□□□□□ -0.51
MSH6-215ENST00000622629 PTPRZ1P23471 2315 aaPredicted RBP11.84□□□□□ -0.51
MSH6-215ENST00000622629 GALR3O60755 368 aaPredicted RBP11.83□□□□□ -0.52
MSH6-215ENST00000622629 CTNSO60931 367 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 KIAA1024LP59773 190 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 SNTA1Q13424 505 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.83□□□□□ -0.521e-10■■■□□ 17.6
MSH6-215ENST00000622629 OTPQ5XKR4 325 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 OR4N2Q8NGD1 307 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 ZNF417Q8TAU3 575 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 STACQ99469 402 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 SLC6A7Q99884 636 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 BCL2L14Q9BZR8 327 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 NRIP3Q9NQ35 241 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 UNC13CQ8NB66 2214 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 LRRC37A2A6NM11 1700 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 MEN1O00255 615 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 PLRG1O43660 514 aaKnown RBP11.83□□□□□ -0.52
MSH6-215ENST00000622629 ZNF432O94892 652 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 SCRN3Q0VDG4 424 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 FAM69BQ5VUD6 431 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 C1orf53Q5VUE5 145 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 METTL11BQ5VVY1 283 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 KIF18BQ86Y91 864 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 ZNF283Q8N7M2 679 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 POGLUT1Q8NBL1 392 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 GPA33Q99795 319 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 TMEM43Q9BTV4 400 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 ZNF471Q9BX82 626 aaPredicted RBP11.83□□□□□ -0.52
MSH6-215ENST00000622629 SEMA6CQ9H3T2 930 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 NOX3Q9HBY0 568 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 OR5K3A6NET4 321 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 ZNF878C9JN71 531 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 CDC42EP2O14613 210 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 P2RX6O15547 441 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 RP2O75695 350 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 CD38P28907 300 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 CD79BP40259 229 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 MAPK14Q16539 360 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 VN1R4Q7Z5H5 301 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 PPP4R1LQ9P1A2 415 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 NCDNQ9UBB6 729 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 GMEB2Q9UKD1 530 aa11.83□□□□□ -0.52
MSH6-215ENST00000622629 PRAMEF25A6NGN4 478 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 KDM4EB2RXH2 506 aaPredicted RBP11.82□□□□□ -0.52
MSH6-215ENST00000622629 LILRB5O75023 590 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 LDOC1O95751 146 aaPredicted RBP11.82□□□□□ -0.52
MSH6-215ENST00000622629 LIPCP11150 499 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 EEF1A2Q05639 463 aaKnown RBP11.82□□□□□ -0.52
MSH6-215ENST00000622629 EIF2B1Q14232 305 aaKnown RBP11.82□□□□□ -0.52
MSH6-215ENST00000622629 SMCO1Q147U7 214 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 SGCAQ16586 387 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 VASNQ6EMK4 673 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 FAM160A2Q8N612 972 aaPredicted RBP11.82□□□□□ -0.52
MSH6-215ENST00000622629 PNLDC1Q8NA58 520 aaKnown RBP11.82□□□□□ -0.52
MSH6-215ENST00000622629 OR5H6Q8NGV6 325 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 OR5J2Q8NH18 312 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 THAP6Q8TBB0 222 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 BAHD1Q8TBE0 780 aaPredicted RBP11.82□□□□□ -0.52
MSH6-215ENST00000622629 ELSPBP1Q96BH3 223 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 SLC6A18Q96N87 628 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 WFDC6Q9BQY6 131 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 ULBP3Q9BZM4 244 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 INIPQ9NRY2 104 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 QPCTLQ9NXS2 382 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 YBX2Q9Y2T7 364 aaKnown RBP11.82□□□□□ -0.52
MSH6-215ENST00000622629 SCN2AQ99250 2005 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 AHCTF1Q8WYP5 2266 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 TRABD2BA6NFA1 517 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 TNFRSF10CO14798 259 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 CD14P08571 375 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 CLRN1P58418 232 aa11.82□□□□□ -0.52
MSH6-215ENST00000622629 TLE3Q04726 772 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms