RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 OR8D4Q8NGM9 314 aa16.02■□□□□ 0.15
PTCHD3-202ENST00000622555 PNPLA2Q96AD5 504 aa16.02■□□□□ 0.15
PTCHD3-202ENST00000622555 SAMD8Q96LT4 415 aa16.02■□□□□ 0.15
PTCHD3-202ENST00000622555 IL20Q9NYY1 176 aa16.02■□□□□ 0.15
PTCHD3-202ENST00000622555 IL20RAQ9UHF4 553 aa16.02■□□□□ 0.15
PTCHD3-202ENST00000622555 MAP1BP46821 2468 aaKnown RBP16.01■□□□□ 0.15
PTCHD3-202ENST00000622555 BLOC1S5-TXNDC5H3BN57 136 aa16.01■□□□□ 0.15
PTCHD3-202ENST00000622555 SULT2B1O00204 365 aa16.01■□□□□ 0.15
PTCHD3-202ENST00000622555 SLC16A6O15403 523 aa16.01■□□□□ 0.15
PTCHD3-202ENST00000622555 CLIC3O95833 236 aa16.01■□□□□ 0.15
PTCHD3-202ENST00000622555 BMP7P18075 431 aa16.01■□□□□ 0.15
PTCHD3-202ENST00000622555 RPL5P46777 297 aaKnown RBP16.01■□□□□ 0.15
PTCHD3-202ENST00000622555 DIO1P49895 249 aa16.01■□□□□ 0.15
PTCHD3-202ENST00000622555 CLDN20P56880 219 aa16.01■□□□□ 0.15
PTCHD3-202ENST00000622555 FXYD6P3P58550 94 aa16.01■□□□□ 0.15
PTCHD3-202ENST00000622555 RPS4XP62701 263 aaKnown RBP16.01■□□□□ 0.15
PTCHD3-202ENST00000622555 FHL1Q13642 323 aa16.01■□□□□ 0.15
PTCHD3-202ENST00000622555 CLEC12AQ5QGZ9 265 aa16.01■□□□□ 0.15
PTCHD3-202ENST00000622555 TMEM236Q5W0B7 351 aa16.01■□□□□ 0.15
PTCHD3-202ENST00000622555 TMPPEQ6ZT21 453 aa16.01■□□□□ 0.15
PTCHD3-202ENST00000622555 OR52L1Q8NGH7 329 aa16.01■□□□□ 0.15
PTCHD3-202ENST00000622555 OR5J2Q8NH18 312 aa16.01■□□□□ 0.15
PTCHD3-202ENST00000622555 NEIL3Q8TAT5 605 aa16.01■□□□□ 0.15
PTCHD3-202ENST00000622555 TSSK6Q9BXA6 273 aa16.01■□□□□ 0.15
PTCHD3-202ENST00000622555 ALKBH4Q9NXW9 302 aa16.01■□□□□ 0.15
PTCHD3-202ENST00000622555 NDUFA13Q9P0J0 144 aa16.01■□□□□ 0.15
PTCHD3-202ENST00000622555 GMPPBQ9Y5P6 360 aa16.01■□□□□ 0.15
PTCHD3-202ENST00000622555 A0A0J9YW62 118 aa16■□□□□ 0.15
PTCHD3-202ENST00000622555 ZAR1LA6NP61 321 aa16■□□□□ 0.15
PTCHD3-202ENST00000622555 M0R082 166 aa16■□□□□ 0.15
PTCHD3-202ENST00000622555 EIF1AYO14602 144 aaKnown RBP16■□□□□ 0.15
PTCHD3-202ENST00000622555 TNFSF11O14788 317 aa16■□□□□ 0.15
PTCHD3-202ENST00000622555 NDUFB2O95178 105 aa16■□□□□ 0.15
PTCHD3-202ENST00000622555 GNAO1P09471 354 aa16■□□□□ 0.15
PTCHD3-202ENST00000622555 PMS2P3Q13401 168 aa16■□□□□ 0.15
PTCHD3-202ENST00000622555 GGNQ86UU5 652 aa16■□□□□ 0.15
PTCHD3-202ENST00000622555 IQCF1Q8N6M8 205 aa16■□□□□ 0.15
PTCHD3-202ENST00000622555 ZNF417Q8TAU3 575 aa16■□□□□ 0.15
PTCHD3-202ENST00000622555 ABTB1Q969K4 478 aaPredicted RBP16■□□□□ 0.15
PTCHD3-202ENST00000622555 MIB2Q96AX9 1013 aa16■□□□□ 0.15
PTCHD3-202ENST00000622555 HRASLS5Q96KN8 279 aa16■□□□□ 0.15
PTCHD3-202ENST00000622555 ZNF587Q96SQ5 575 aaPredicted RBP16■□□□□ 0.15
PTCHD3-202ENST00000622555 SEC14L4Q9UDX3 406 aa16■□□□□ 0.15
PTCHD3-202ENST00000622555 TRAPPC4Q9Y296 219 aa16■□□□□ 0.15
PTCHD3-202ENST00000622555 HIF3AQ9Y2N7 669 aa16■□□□□ 0.15
PTCHD3-202ENST00000622555 CORINQ9Y5Q5 1042 aa16■□□□□ 0.15
PTCHD3-202ENST00000622555 DSPP15924 2871 aaKnown RBP16■□□□□ 0.15
PTCHD3-202ENST00000622555 TRIM64CA6NLI5 447 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 NPIPA5E9PKD4 350 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 H0YC42 278 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 PMS2P2O95744 297 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 CLPTM1O96005 669 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 ACTL6AO96019 429 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 AQP2P41181 271 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 LHX2P50458 406 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 TPD52P55327 224 aaPredicted RBP15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 PRPS1P60891 318 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 SLC35A1P78382 337 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 GINS1Q14691 196 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 SGCBQ16585 318 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 ANKDD1AQ495B1 522 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 THSD4Q6ZMP0 1018 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 ESPNLQ6ZVH7 1005 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 MOSPD2Q8NHP6 518 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 PITX2Q99697 317 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 ENKD1Q9H0I2 346 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 MRPL39Q9NYK5 338 aaKnown RBP15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 NDRG4Q9ULP0 352 aaKnown RBP15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 NPIPA1Q9UND3 350 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 MYRFQ9Y2G1 1151 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 PKD1L2Q7Z442 2459 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 SMIM31A0A1B0GVY4 71 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 E9PQ18 207 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 AKR7A3O95154 331 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 OR6A2O95222 327 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 IGHG3P01860 377 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 CRYABP02511 175 aaKnown RBP15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 SLC6A6P31641 620 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 UQCRC1P31930 480 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 RPL4P36578 427 aaKnown RBP15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 GIPRP48546 466 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 SMSP52788 366 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 SUCLG1P53597 346 aaKnown RBP15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 CSNK2A1P68400 391 aaPredicted RBP15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 RPL18Q07020 188 aaKnown RBP15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 KEAP1Q14145 624 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 CTU2Q2VPK5 515 aaKnown RBP15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 KCTD21Q4G0X4 260 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 HBMQ6B0K9 141 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 KRT80Q6KB66 452 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 SLC27A4Q6P1M0 643 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 H1FNTQ75WM6 255 aaPredicted RBP15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 SIAH3Q8IW03 269 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 EXD3Q8N9H8 876 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 SCAIQ8N9R8 606 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 IFT27Q9BW83 186 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 NDEL1Q9GZM8 345 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 CHST11Q9NPF2 352 aa15.99■□□□□ 0.15
PTCHD3-202ENST00000622555 ADORA3P0DMS8 318 aa15.98■□□□□ 0.15
PTCHD3-202ENST00000622555 GGT2P36268 569 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms