RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 ARFIP1P53367 373 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 C21orf59P57076 290 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 STXBP1P61764 594 aaKnown RBP4.26□□□□□ -1.73
VPS29-212ENST00000621131 RPS15AP62244 130 aaKnown RBP4.26□□□□□ -1.73
VPS29-212ENST00000621131 TRA2BP62995 288 aaKnown RBP4.26□□□□□ -1.73
VPS29-212ENST00000621131 SKP1P63208 163 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 PRDX1Q06830 199 aaKnown RBP4.26□□□□□ -1.73
VPS29-212ENST00000621131 RGS1Q08116 209 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 SIGLEC14Q08ET2 396 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 HEPACAMQ14CZ8 416 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 ELOCQ15369 112 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 DCAF10Q5QP82 559 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 CPTPQ5TA50 214 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 ERICH5Q6P6B1 374 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 TRIM40Q6P9F5 258 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 CORO6Q6QEF8 472 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 ABRAXAS1Q6UWZ7 409 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 LRRC74BQ6ZQY2 392 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 Q6ZS52 159 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 TAF8Q7Z7C8 310 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 ZNF554Q86TJ5 538 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 IQCHQ86VS3 1027 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 PARGQ86W56 976 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 AMIGO1Q86WK6 493 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 GKN2Q86XP6 184 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 FUNDC1Q8IVP5 155 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 AQP12AQ8IXF9 295 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 ICA1LQ8NDH6 482 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 TRPV3Q8NET8 790 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 OR52E1Q8NGJ3 308 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 HPSE2Q8WWQ2 592 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 OR1E3Q8WZA6 343 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 NCLNQ969V3 563 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 VPS33AQ96AX1 596 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 PPWD1Q96BP3 646 aaKnown RBP4.26□□□□□ -1.73
VPS29-212ENST00000621131 PPCDCQ96CD2 204 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 FAM120BQ96EK7 910 aaKnown RBP4.26□□□□□ -1.73
VPS29-212ENST00000621131 PDXPQ96GD0 296 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 C18orf12Q96KH6 178 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 FCRL1Q96LA6 429 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 NSMCE2Q96MF7 247 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 OR4K3Q96R72 315 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 PANX1Q96RD7 426 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 CGREF1Q99674 301 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 THUMPD3Q9BV44 507 aaKnown RBP4.26□□□□□ -1.73
VPS29-212ENST00000621131 ACAT2Q9BWD1 397 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 FAIM2Q9BWQ8 316 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 EBPLQ9BY08 206 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 LAT2Q9GZY6 243 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 TBC1D17Q9HA65 648 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 ACKR4Q9NPB9 350 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 MYNNQ9NPC7 610 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 GIMAP4Q9NUV9 329 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 WSB2Q9NYS7 404 aaPredicted RBP4.26□□□□□ -1.73
VPS29-212ENST00000621131 ABCD2Q9UBJ2 740 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 SPASTQ9UBP0 616 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 ZNF282Q9UDV7 671 aaPredicted RBP4.26□□□□□ -1.73
VPS29-212ENST00000621131 CCL27Q9Y4X3 112 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 LAMA1P25391 3075 aa4.26□□□□□ -1.73
VPS29-212ENST00000621131 IGHV1OR15-9A0A0B4J2B8 117 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 SPTY2D1-AS1A0A0U1RR47 76 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 ELOVL7A1L3X0 281 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 GSAPA4D1B5 854 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 KRT87PA6NCN2 255 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 OR52A4PA6NMU1 304 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 FAM220BPB1ANY3 271 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 C9JVG2 144 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 ATP6V0E1O15342 81 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 SH3BP5O60239 455 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 SCELO95171 688 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 LRATO95237 230 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 CPSF4O95639 269 aaKnown RBP4.25□□□□□ -1.73
VPS29-212ENST00000621131 KRT75O95678 551 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 IGHV4-34P06331 123 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 GPIP06744 558 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 SLC35G6P0C7Q6 338 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 ACADSP16219 412 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 XRCC1P18887 633 aaPredicted RBP4.25□□□□□ -1.73
VPS29-212ENST00000621131 CD22P20273 847 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 CD27P26842 260 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 HTR1EP28566 365 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 NTSP30990 170 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 GCKP35557 465 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 SSR2P43308 183 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 TSFMP43897 325 aaKnown RBP4.25□□□□□ -1.73
VPS29-212ENST00000621131 CXCL12P48061 93 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 RXRGP48443 463 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 CAMPP49913 170 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 MAPK12P53778 367 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 MRPS22P82650 360 aaKnown RBP4.25□□□□□ -1.73
VPS29-212ENST00000621131 LIPEQ05469 1076 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 C2orf80Q0P641 193 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 CEACAM7Q14002 265 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 CAPRIN1Q14444 709 aaKnown RBP4.25□□□□□ -1.73
VPS29-212ENST00000621131 TRIP10Q15642 601 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 CYP51A1Q16850 503 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 HKDC1Q2TB90 917 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 FAM98BQ52LJ0 330 aaKnown RBP4.25□□□□□ -1.73
VPS29-212ENST00000621131 SPANXN4Q5MJ08 99 aa4.25□□□□□ -1.73
VPS29-212ENST00000621131 KHDRBS2Q5VWX1 349 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms