RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 MRPS10P82664 201 aaKnown RBP17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 IL10RAQ13651 578 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 EXOSC7Q15024 291 aaKnown RBP17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 ALKAL2Q6UX46 152 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 OR52B4Q8NGK2 314 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 COQ8AQ8NI60 647 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 RNF166Q96A37 237 aaPredicted RBP17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 HAVCR1Q96D42 359 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 OR1F2PQ96R84 312 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 ZNF281Q9Y2X9 895 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 ENTPD2Q9Y5L3 495 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 A0A087WV48 116 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 A0A087WV62 115 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 SLC22A23A1A5C7 686 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 IMPA2O14732 288 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 LDB3O75112 727 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 NDUFB2O95178 105 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 HIST1H2ABP04908 130 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 RAB40ALP0C0E4 278 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 SLC35G6P0C7Q6 338 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 ACRP10323 421 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 ITGB8P26012 769 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 S100A11P31949 105 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 EMDP50402 254 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 PON3Q15166 354 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 B3GNTL1Q67FW5 361 aaPredicted RBP17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 FBXO42Q6P3S6 717 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 HIST3H2AQ7L7L0 130 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 SCARB1Q8WTV0 552 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 RAB40AQ8WXH6 277 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 HIST1H2ACQ93077 130 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 MS4A7Q9GZW8 240 aaPredicted RBP17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 SLC17A4Q9Y2C5 497 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 ADAM18Q9Y3Q7 739 aa17.95■□□□□ 0.46
PDLIM3-212ENST00000620787 PRR32B1ATL7 298 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 KRBOX1C9JBD0 128 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 ACOT7O00154 380 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 B3GALT2O43825 422 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 IFNA16P05015 189 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 VSIG10L2P0DP72 767 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 CALCRP30988 508 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 GABRA3P34903 492 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 ACAA2P42765 397 aaKnown RBP17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 CBFBQ13951 182 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 TMUB2Q71RG4 321 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 RTL10Q7L3V2 364 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 SMARCD2Q92925 531 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 TM4SF19Q96DZ7 209 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 MYADMQ96S97 322 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 TRPV4Q9HBA0 871 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 ZNF860A6NHJ4 632 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 TMEM127O75204 238 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 ZFPL1O95159 310 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 AK1P00568 194 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 CALCBP10092 127 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 MNDAP41218 407 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 TAS2R20P59543 309 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 STX4Q12846 297 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 ALG10BQ5I7T1 473 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 NPEPL1Q8NDH3 523 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 ZPLD1Q8TCW7 415 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 PNPLA2Q96AD5 504 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 HSPA12BQ96MM6 686 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 DPYSL5Q9BPU6 564 aa17.94■□□□□ 0.46
PDLIM3-212ENST00000620787 PYCARD-AS1I3L0S3 204 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 PSMD9O00233 223 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 FGF17O60258 216 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 RP2O75695 350 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 PROS1P07225 676 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 LGALS3BPQ08380 585 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 C2orf68Q2NKX9 166 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 TFAP2EQ6VUC0 442 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 LINC00114Q6XXX2 140 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 TMEFF1Q8IYR6 380 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 ZNF614Q8N883 585 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 TMEM52Q8NDY8 209 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 DNAAF1Q8NEP3 725 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 LCN9Q8WX39 176 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 MIB2Q96AX9 1013 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 FKRPQ9H9S5 495 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 OPN4Q9UHM6 478 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 HMSDA8MTL9 139 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 LGALS8O00214 317 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 ARPC5O15511 151 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 FGF2P09038 288 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 HNRNPA1P09651 372 aaKnown RBP eCLIP17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 CT62P0C5K7 136 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 SPI1P17947 270 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 AK4P27144 223 aaPredicted RBP17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 MGAT2Q10469 447 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 ZNF273Q14593 569 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 ZCCHC12Q6PEW1 402 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 DNM1P46Q6ZS02 220 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 SLC36A1Q7Z2H8 476 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 OR52H1Q8NGJ2 320 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 NSMAFQ92636 917 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 PMM1Q92871 262 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 SIPA1Q96FS4 1042 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 OR2A5Q96R48 311 aa17.93■□□□□ 0.46
PDLIM3-212ENST00000620787 NMNAT3Q96T66 252 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms