RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 PCP4P48539 62 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 AGFG1P52594 562 aaKnown RBP2.87□□□□□ -1.95
NEB-220ENST00000618972 LBX1P52954 281 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 UBE2V2Q15819 145 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 DEFB128Q7Z7B8 93 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 OR10H5Q8NGA6 315 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 CABLES2Q9BTV7 478 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 C1orf123Q9NWV4 160 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 FBXL12Q9NXK8 326 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 SLC45A1Q9Y2W3 748 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 TRAV36DV7A0A075B6V5 113 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 HYKKA2RU49 373 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 ZNHIT1O43257 154 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 APBB3O95704 486 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 CH25HO95992 272 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 SCAND1P57086 179 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 RPS27AP62979 156 aaKnown RBP2.87□□□□□ -1.95
NEB-220ENST00000618972 UBA52P62987 128 aaKnown RBP2.87□□□□□ -1.95
NEB-220ENST00000618972 CTXN3Q4LDR2 81 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 FAM205BPQ63HN1 556 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 APOOLQ6UXV4 268 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 TMPPEQ6ZT21 453 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 TRMT11Q7Z4G4 463 aaKnown RBP2.87□□□□□ -1.95
NEB-220ENST00000618972 HMGB4Q8WW32 186 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 BMFQ96LC9 184 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 NUDT4Q9NZJ9 180 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 TRBC2A0A5B9 178 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 SIX6O95475 246 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 TK1P04183 234 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 H2AFB1P0C5Y9 115 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 CTSAP10619 480 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 OR1D2P34982 312 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 SLC6A11P48066 632 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 RPS20P60866 119 aaKnown RBP2.87□□□□□ -1.95
NEB-220ENST00000618972 SLC18B1Q6NT16 456 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 TSSK4Q6SA08 328 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 LRRTM4Q86VH4 590 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 FJX1Q86VR8 437 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 NECAP1Q8NC96 275 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 HAS2Q92819 552 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 FYTTD1Q96QD9 318 aaKnown RBP2.87□□□□□ -1.95
NEB-220ENST00000618972 GSX1Q9H4S2 264 aaPredicted RBP2.87□□□□□ -1.95
NEB-220ENST00000618972 NCDNQ9UBB6 729 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 DNAJB11Q9UBS4 358 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 SLC2A10O95528 541 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 CALCBP10092 127 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 CRYBB1P53674 252 aaPredicted RBP2.87□□□□□ -1.95
NEB-220ENST00000618972 RPUSD4Q96CM3 377 aaKnown RBP2.87□□□□□ -1.95
NEB-220ENST00000618972 CXorf58Q96LI9 332 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 F2RL3Q96RI0 385 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 NEUROD4Q9HD90 331 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 FAM206AQ9NX38 181 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 PRODH2Q9UF12 536 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 TTC37Q6PGP7 1564 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 ZNF623O75123 536 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 F11P03951 625 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 APOBEC3AP31941 199 aaPredicted RBP2.87□□□□□ -1.95
NEB-220ENST00000618972 SLC12A9Q9BXP2 914 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 APOBEC3BQ9UH17 382 aaKnown RBP2.87□□□□□ -1.95
NEB-220ENST00000618972 CCL15-CCL14A0A0B4J2E2 113 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 RFPL4AA6NLU0 287 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 RFPL4AL1F8VTS6 287 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 PTHP01270 115 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 RHOP08100 348 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 DDCP20711 480 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 WNT4P56705 351 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 SIRPAP78324 504 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 SRSF5Q13243 272 aaKnown RBP2.87□□□□□ -1.95
NEB-220ENST00000618972 CCL15Q16663 113 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 BAP18Q8IXM2 172 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 AQP11Q8NBQ7 271 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 SEC61A2Q9H9S3 476 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 ZNF286AQ9HBT8 521 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 TM7SF3Q9NS93 570 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 HSPB7Q9UBY9 170 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 MAP2P11137 1827 aaKnown RBP2.87□□□□□ -1.95
NEB-220ENST00000618972 TMEM229AB2RXF0 380 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 TBL1XO60907 577 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 RHOQP17081 205 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 RHOAP61586 193 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 TRA2BP62995 288 aaKnown RBP2.87□□□□□ -1.95
NEB-220ENST00000618972 COL5A1-AS1Q5SY13 56 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 DTWD2Q8NBA8 298 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 CASD1Q96PB1 797 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 AGLP35573 1532 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 MSTNO14793 375 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 MS4A13Q5J8X5 152 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 CILP2Q8IUL8 1156 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 STEAP2Q8NFT2 490 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 CREB3L4Q8TEY5 395 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 RTP4Q96DX8 246 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 GALNT9Q9HCQ5 603 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 SLC35D1Q9NTN3 355 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 TSPOAP1O95153 1857 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 BLACEA4D250 179 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 PLA2G10O15496 165 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 CCR9P51686 369 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 POU6F2P78424 691 aaPredicted RBP2.87□□□□□ -1.95
NEB-220ENST00000618972 PGGHGQ32M88 737 aa2.87□□□□□ -1.95
NEB-220ENST00000618972 ARSIQ5FYB1 569 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms