RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 GPR68Q15743 365 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 TOMM34Q15785 309 aaPredicted RBP4.74□□□□□ -1.65
SHMT1-211ENST00000618902 TBCEQ15813 527 aaPredicted RBP4.74□□□□□ -1.65
SHMT1-211ENST00000618902 ZNF141Q15928 474 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 TMEM44Q2T9K0 475 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 ZIK1Q3SY52 487 aaPredicted RBP4.74□□□□□ -1.65
SHMT1-211ENST00000618902 FBXL19-AS1Q494R0 122 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 GXYLT1Q4G148 440 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 FLYWCH1Q4VC44 716 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 WIPI1Q5MNZ9 446 aaPredicted RBP4.74□□□□□ -1.65
SHMT1-211ENST00000618902 PDZK1Q5T2W1 519 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 GCNT6Q5T4J0 391 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 C1QTNF12Q5T7M4 302 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 RIPPLY2Q5TAB7 128 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 MEDAGQ5VYS4 303 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 VASNQ6EMK4 673 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 OR2A2Q6IF42 318 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 CBLN3Q6UW01 205 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 ARSKQ6UWY0 536 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 C16orf62Q7Z3J2 963 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 MRGPRGQ86SM5 289 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 ADCK1Q86TW2 530 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 KRT73Q86Y46 540 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 PLCZ1Q86YW0 608 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 ARMC8Q8IUR7 673 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 ZNF619Q8N2I2 560 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 CENPSQ8N2Z9 138 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 ATG16L2Q8NAA4 619 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 ZNF527Q8NB42 609 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 ACBD4Q8NC06 268 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 ZNF540Q8NDQ6 660 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 FAM71CQ8NEG0 241 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 BPIFB6Q8NFQ5 453 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 KBTBD8Q8NFY9 601 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 OR5M1Q8NGP8 315 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 OR6Q1Q8NGQ2 317 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 NFKBIDQ8NI38 313 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 POC1BQ8TC44 478 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 CA5BP1Q8WTZ4 195 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 CHAC2Q8WUX2 184 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 ITLN2Q8WWU7 325 aaPredicted RBP4.74□□□□□ -1.65
SHMT1-211ENST00000618902 CNOT9Q92600 299 aaKnown RBP4.74□□□□□ -1.65
SHMT1-211ENST00000618902 YIPF6Q96EC8 236 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 C14orf79Q96F83 325 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 CCDC120Q96HB5 630 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 TMEM19Q96HH6 336 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 JSRP1Q96MG2 331 aaPredicted RBP4.74□□□□□ -1.65
SHMT1-211ENST00000618902 MBOAT4Q96T53 435 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 TM9SF2Q99805 663 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 TREX2Q9BQ50 279 aaPredicted RBP4.74□□□□□ -1.65
SHMT1-211ENST00000618902 USB1Q9BQ65 265 aaKnown RBP4.74□□□□□ -1.65
SHMT1-211ENST00000618902 DCUN1D5Q9BTE7 237 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 AMBRA1Q9C0C7 1298 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 OR2B2Q9GZK3 357 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 PIF1Q9H611 641 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 LDAHQ9H6V9 325 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 BCL2L10Q9HD36 194 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 A4GALTQ9NPC4 353 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 FANCFQ9NPI8 374 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 ACOT13Q9NPJ3 140 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 POLE3Q9NRF9 147 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 UBQLN4Q9NRR5 601 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 KRT84Q9NSB2 600 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 NPAP1Q9NZP6 1156 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 KLRF1Q9NZS2 232 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 PDP1Q9P0J1 537 aaPredicted RBP4.74□□□□□ -1.65
SHMT1-211ENST00000618902 CRNNQ9UBG3 495 aaPredicted RBP4.74□□□□□ -1.65
SHMT1-211ENST00000618902 TMEFF2Q9UIK5 374 aaPredicted RBP4.74□□□□□ -1.65
SHMT1-211ENST00000618902 SLC6A5Q9Y345 797 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 SAMHD1Q9Y3Z3 626 aaKnown RBP4.74□□□□□ -1.65
SHMT1-211ENST00000618902 WDR45Q9Y484 360 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 MPDZO75970 2070 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 DSPPQ9NZW4 1301 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 MED12LQ86YW9 2145 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 A0A075B6Q4 140 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 A0A1B0GTH9 108 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 TMEM247A6NEH6 219 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 SERINC4A6NH21 518 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 AGAP5A6NIR3 686 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 H0YC42 278 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 AP3D1O14617 1153 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 DVL2O14641 736 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 FRS3O43559 492 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 CDC40O60508 579 aaKnown RBP eCLIP4.73□□□□□ -1.65
SHMT1-211ENST00000618902 STX11O75558 287 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 NTN1O95631 604 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 CLIC3O95833 236 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 IL2RAP01589 272 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 APOA1P02647 267 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 BCHEP06276 602 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 NR2F1P10589 423 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 PIPP12273 146 aaPredicted RBP4.73□□□□□ -1.65
SHMT1-211ENST00000618902 FCGR2AP12318 317 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 PRG2P13727 222 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 ZNF17P17021 662 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 RHCEP18577 417 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 IL11P20809 199 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 GDF1P27539 372 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 SHC1P29353 583 aa4.73□□□□□ -1.65
SHMT1-211ENST00000618902 OPRM1P35372 400 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms