RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 CBLL1Q75N03 491 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 TSEN54Q7Z6J9 526 aaKnown RBP7.3□□□□□ -1.24
NEK3-209ENST00000618856 STK32CQ86UX6 486 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 EPHX4Q8IUS5 362 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 PGAM4Q8N0Y7 254 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 SCAIQ8N9R8 606 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 ELOA3Q8NG57 546 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 OR9K2Q8NGE7 335 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 ADAMTS16Q8TE57 1224 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 MPP4Q96JB8 637 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 USB1Q9BQ65 265 aaKnown RBP7.3□□□□□ -1.24
NEK3-209ENST00000618856 AMBRA1Q9C0C7 1298 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 C12orf49Q9H741 205 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 GORASP2Q9H8Y8 452 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 RPS6KB2Q9UBS0 482 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 NDRG3Q9UGV2 375 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 SLC13A4Q9UKG4 626 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 RASD1Q9Y272 281 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 B3GALT5Q9Y2C3 310 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 SLC9A8Q9Y2E8 581 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 CACNA1DQ01668 2161 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 MYO9AB2RTY4 2548 aa7.3□□□□□ -1.24
NEK3-209ENST00000618856 ANKRD17O75179 2603 aaKnown RBP7.3□□□□□ -1.24
NEK3-209ENST00000618856 FREM1Q5H8C1 2179 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 A0A1W2PPR1 153 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 DEFB108AA8MXU0 73 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 MS4A18H0YCH9 400 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 KLF4O43474 513 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 ZNF432O94892 652 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 PRSS23O95084 383 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 OR5F1O95221 314 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 AHSA1O95433 338 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 MT-ATP6P00846 226 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 T-ENOLP0DO92 83 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 RBM34P42696 430 aaKnown RBP7.29□□□□□ -1.24
NEK3-209ENST00000618856 RPS5P46782 204 aaKnown RBP7.29□□□□□ -1.24
NEK3-209ENST00000618856 NCALDP61601 193 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 ITGADQ13349 1161 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 MFSD13AQ14CX5 517 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 MS4A18Q3C1V0 323 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 IQCCQ4KMZ1 466 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 C1QTNF12Q5T7M4 302 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 FBXW9Q5XUX1 488 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 CXorf67Q86X51 503 aaPredicted RBP7.29□□□□□ -1.24
NEK3-209ENST00000618856 CARM1Q86X55 608 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 STEAP2Q8NFT2 490 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 SLC26A7Q8TE54 656 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 LIPHQ8WWY8 451 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 PROX1Q92786 737 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 DNAJA3Q96EY1 480 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 MUS81Q96NY9 551 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 MOGAT1Q96PD6 335 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 ZNF385AQ96PM9 386 aaKnown RBP7.29□□□□□ -1.24
NEK3-209ENST00000618856 TAPBPLQ9BX59 468 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 PLEKHF2Q9H8W4 249 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 MEPEQ9NQ76 525 aaPredicted RBP7.29□□□□□ -1.24
NEK3-209ENST00000618856 PARPBPQ9NWS1 579 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 MRPL39Q9NYK5 338 aaKnown RBP7.29□□□□□ -1.24
NEK3-209ENST00000618856 SEC14L4Q9UDX3 406 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 PRSS50Q9UI38 385 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 A4GNTQ9UNA3 340 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 NOSIPQ9Y314 301 aaKnown RBP7.29□□□□□ -1.24
NEK3-209ENST00000618856 SH3GLB1Q9Y371 365 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 CORINQ9Y5Q5 1042 aa7.29□□□□□ -1.24
NEK3-209ENST00000618856 CELSR1Q9NYQ6 3014 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 ZNF469Q96JG9 3925 aaPredicted RBP7.28□□□□□ -1.24
NEK3-209ENST00000618856 SPG11Q96JI7 2443 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 MPDZO75970 2070 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 HTR3EA5X5Y0 456 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 CPSF4LA6NMK7 179 aaKnown RBP7.28□□□□□ -1.24
NEK3-209ENST00000618856 M0R082 166 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 FFAR1O14842 300 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 TRAF3IP2O43734 574 aaPredicted RBP7.28□□□□□ -1.24
NEK3-209ENST00000618856 MRPL33O75394 65 aaKnown RBP7.28□□□□□ -1.24
NEK3-209ENST00000618856 ADAP00813 363 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 SEMG1P04279 462 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 ASAH2BP0C7U1 165 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 TNFRSF1BP20333 461 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 IGHV1-2P23083 117 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 GRPRP30550 384 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 OR1E2P47887 323 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 MNAT1P51948 309 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 SLC25A3Q00325 362 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 ZP4Q12836 540 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 PIN1Q13526 163 aaPredicted RBP7.28□□□□□ -1.24
NEK3-209ENST00000618856 ZNF74Q16587 644 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 EXOC3L2Q2M3D2 409 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 LRRC23Q53EV4 343 aaPredicted RBP7.28□□□□□ -1.24
NEK3-209ENST00000618856 H1FNTQ75WM6 255 aaPredicted RBP7.28□□□□□ -1.24
NEK3-209ENST00000618856 SSX8Q7RTT4 187 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 VTCN1Q7Z7D3 282 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 P2RY8Q86VZ1 359 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 CDC20BQ86Y33 519 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 P3H2Q8IVL5 708 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 ZNF433Q8N7K0 673 aaPredicted RBP7.28□□□□□ -1.24
NEK3-209ENST00000618856 CCDC197Q8NCU1 140 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 ANKK1Q8NFD2 765 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 VANGL1Q8TAA9 524 aaPredicted RBP7.28□□□□□ -1.24
NEK3-209ENST00000618856 ZNF417Q8TAU3 575 aa7.28□□□□□ -1.24
NEK3-209ENST00000618856 APH1AQ96BI3 265 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms