RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 RAB1CQ92928 201 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 ATP6V1E2Q96A05 226 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 ZNF524Q96C55 264 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 DMRTB1Q96MA1 342 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 OSBPL9Q96SU4 736 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 ZNF180Q9UJW8 692 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 SNX12Q9UMY4 172 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 DNAH7Q8WXX0 4024 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 A0A096LPK6 155 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 LIPT2A6NK58 231 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 A8MT66 165 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 C17orf100A8MU93 164 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 AKAP8O43823 692 aaKnown RBP3.89□□□□□ -1.79
SNCA-213ENST00000618500 NCR1O76036 304 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 UBL3O95164 117 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 IGHV2-70P01814 119 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 HPXP02790 462 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 IMPDH2P12268 514 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 DCTN2Q13561 401 aaKnown RBP3.89□□□□□ -1.79
SNCA-213ENST00000618500 KIAA0040Q15053 153 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 FAM153CQ494X1 144 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 HIKESHIQ53FT3 197 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 RUSC1-AS1Q66K80 236 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 FAHD2BQ6P2I3 314 aaPredicted RBP3.89□□□□□ -1.79
SNCA-213ENST00000618500 CREB3L2Q70SY1 520 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 AAED1Q7RTV5 226 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 CMC1Q7Z7K0 106 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 SLC16A11Q8NCK7 471 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 STK35Q8TDR2 534 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 OR5P2Q8WZ92 322 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 DYRK2Q92630 601 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 ELMOD3Q96FG2 381 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 FAHD2AQ96GK7 314 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 CITED4Q96RK1 184 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 MRI1Q9BV20 369 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 THUMPD3Q9BV44 507 aaKnown RBP3.89□□□□□ -1.79
SNCA-213ENST00000618500 NOX3Q9HBY0 568 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 GPATCH2Q9NW75 528 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 CPSF2Q9P2I0 782 aaKnown RBP3.89□□□□□ -1.79
SNCA-213ENST00000618500 RNF14Q9UBS8 474 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 ZNF69Q9UC07 566 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 NKX1-2Q9UD57 310 aaPredicted RBP3.89□□□□□ -1.79
SNCA-213ENST00000618500 RYR2Q92736 4967 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 TLN2Q9Y4G6 2542 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 AGAP5A6NIR3 686 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 DUXAA6NLW8 204 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 GTPBP1O00178 669 aaKnown RBP3.89□□□□□ -1.79
SNCA-213ENST00000618500 SLC28A1O00337 649 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 WNT9BO14905 357 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 OPN1MWP04001 364 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 OPN1MW2P0DN77 364 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 OPN1MW3P0DN78 364 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 TCP1P17987 556 aaKnown RBP3.89□□□□□ -1.79
SNCA-213ENST00000618500 TUBG1P23258 451 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 ZFP36P26651 326 aaKnown RBP3.89□□□□□ -1.79
SNCA-213ENST00000618500 KRTAP10-3P60369 221 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 SNTB2Q13425 540 aaKnown RBP3.89□□□□□ -1.79
SNCA-213ENST00000618500 TIGD2Q4W5G0 525 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 UNC50Q53HI1 259 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 ZNF311Q5JNZ3 666 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 NOXRED1Q6NXP6 359 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 TIFABQ6ZNK6 161 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 EIF3MQ7L2H7 374 aaKnown RBP3.89□□□□□ -1.79
SNCA-213ENST00000618500 ZBED8Q8IZ13 594 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 CDS1Q92903 461 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 FAM120BQ96EK7 910 aaKnown RBP3.89□□□□□ -1.79
SNCA-213ENST00000618500 SH3YL1Q96HL8 342 aaPredicted RBP3.89□□□□□ -1.79
SNCA-213ENST00000618500 NSUN5Q96P11 429 aaKnown RBP3.89□□□□□ -1.79
SNCA-213ENST00000618500 ZIM3Q96PE6 472 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 QRSL1Q9H0R6 528 aaKnown RBP3.89□□□□□ -1.79
SNCA-213ENST00000618500 C7orf69Q9H7B7 122 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 TUBG2Q9NRH3 451 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 TREM2Q9NZC2 230 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 PURGQ9UJV8 347 aaKnown RBP3.89□□□□□ -1.79
SNCA-213ENST00000618500 IGHV1-69-2A0A0G2JMI3 117 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 J3QL48 77 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 OR4F21O95013 312 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 SLU7O95391 586 aaKnown RBP3.88□□□□□ -1.79
SNCA-213ENST00000618500 SBK3P0C264 359 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 IMPDH1P20839 514 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 PRKAA2P54646 552 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 OR2B6P58173 313 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 MERTKQ12866 999 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 SMU1Q2TAY7 513 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 GDPGP1Q6ZNW5 385 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 LINGO2Q7L985 606 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 SPICQ8N5J4 248 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 ZNF283Q8N7M2 679 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 FBXO25Q8TCJ0 367 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 UBE2FQ969M7 185 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 CCDC126Q96EE4 140 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 WWC2-AS2Q96NR7 200 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 MECRQ9BV79 373 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 CTPS2Q9NRF8 586 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.88□□□□□ -1.79
SNCA-213ENST00000618500 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.88□□□□□ -1.79
SNCA-213ENST00000618500 WIPI2Q9Y4P8 454 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 PPIAL4AQ9Y536 164 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 AUP1Q9Y679 476 aa3.88□□□□□ -1.79
SNCA-213ENST00000618500 TMEM72A0PK05 275 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms