RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 FXYD6P3P58550 94 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 RELAQ04206 551 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 CPEB2Q7Z5Q1 589 aaKnown RBP12.79□□□□□ -0.36
CIITA-213ENST00000618327 HAVCR2Q8TDQ0 301 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 FER1L6-AS2Q96M78 137 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 UBQLN3Q9H347 655 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 CPNE5Q9HCH3 593 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 GSKIPQ9P0R6 139 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 EDARQ9UNE0 448 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 PCDHGA6Q9Y5G7 932 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 ZDBF2Q9HCK1 2354 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 PRKNO60260 465 aaPredicted RBP12.79□□□□□ -0.36
CIITA-213ENST00000618327 DPP4P27487 766 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 SLC26A5P58743 744 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 FOXK2Q01167 660 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 LRRC37A5PQ49AS3 106 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 ZNF582Q96NG8 517 aaPredicted RBP12.79□□□□□ -0.36
CIITA-213ENST00000618327 DPCDQ9BVM2 203 aaPredicted RBP12.79□□□□□ -0.36
CIITA-213ENST00000618327 SLC38A1Q9H2H9 487 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 ATP13A2Q9NQ11 1180 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 SIRT5Q9NXA8 310 aa12.79□□□□□ -0.36
CIITA-213ENST00000618327 C2orf72A6NCS6 295 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 RAB3BP20337 219 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 C21orf58P58505 322 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 SLC15A4Q8N697 577 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 PFN4Q8NHR9 129 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 NDNFQ8TB73 568 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 NXF5Q9H1B4 397 aaKnown RBP12.78□□□□□ -0.36
CIITA-213ENST00000618327 CDCP1Q9H5V8 836 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 ERVK13-1Q9NX77 482 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 BABAM2Q9NXR7 383 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 MCTS1Q9ULC4 181 aaKnown RBP12.78□□□□□ -0.36
CIITA-213ENST00000618327 CD46P15529 392 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 CSNK1A1P48729 337 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 GDI2P50395 445 aaKnown RBP12.78□□□□□ -0.36
CIITA-213ENST00000618327 ISL1P61371 349 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 EEF1A1P68104 462 aaKnown RBP12.78□□□□□ -0.36
CIITA-213ENST00000618327 SNTB2Q13425 540 aaKnown RBP12.78□□□□□ -0.36
CIITA-213ENST00000618327 CRMP1Q14194 572 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 BCL2L15Q5TBC7 163 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 NXNL2Q5VZ03 156 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 ANKRD34AQ69YU3 496 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 ZNF322Q6U7Q0 402 aaPredicted RBP12.78□□□□□ -0.36
CIITA-213ENST00000618327 ESX1Q8N693 406 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 NAXEQ8NCW5 288 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 OR13C3Q8NGS6 347 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 C4orf36Q96KX1 117 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 MGAMO43451 1857 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 ZSWIM8A7E2V4 1837 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 PRKYO43930 277 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 RRADP55042 308 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 NKG7Q16617 165 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 OR2G6Q5TZ20 316 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 B3GLCTQ6Y288 498 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 TMEM179BQ7Z7N9 219 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 TMEM41AQ96HV5 264 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 DHRS1Q96LJ7 313 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 ATPIF1Q9UII2 106 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 ACAD8Q9UKU7 415 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 KCNE3Q9Y6H6 103 aa12.78□□□□□ -0.36
CIITA-213ENST00000618327 A8MVM7 634 aa12.77□□□□□ -0.36
CIITA-213ENST00000618327 NPIPB8E9PQR5 432 aa12.77□□□□□ -0.36
CIITA-213ENST00000618327 SLC33A1O00400 549 aaPredicted RBP12.77□□□□□ -0.36
CIITA-213ENST00000618327 EEF1E1O43324 174 aaKnown RBP12.77□□□□□ -0.36
CIITA-213ENST00000618327 FOLR1P15328 257 aa12.77□□□□□ -0.36
CIITA-213ENST00000618327 RGS19P49795 217 aa12.77□□□□□ -0.36
CIITA-213ENST00000618327 MLLT11Q13015 90 aaPredicted RBP12.77□□□□□ -0.36
CIITA-213ENST00000618327 AADACL4Q5VUY2 407 aa12.77□□□□□ -0.36
CIITA-213ENST00000618327 LRRC56Q8IYG6 542 aaPredicted RBP12.77□□□□□ -0.36
CIITA-213ENST00000618327 CARFQ8N187 725 aa12.77□□□□□ -0.36
CIITA-213ENST00000618327 OR2L13Q8N349 312 aa12.77□□□□□ -0.36
CIITA-213ENST00000618327 OR1L3Q8NH93 324 aa12.77□□□□□ -0.36
CIITA-213ENST00000618327 MUL1Q969V5 352 aa12.77□□□□□ -0.36
CIITA-213ENST00000618327 C7orf34Q96L11 122 aa12.77□□□□□ -0.36
CIITA-213ENST00000618327 HYLS1Q96M11 299 aa12.77□□□□□ -0.36
CIITA-213ENST00000618327 RBBP9O75884 186 aa12.77□□□□□ -0.36
CIITA-213ENST00000618327 MSX1P28360 303 aa12.77□□□□□ -0.36
CIITA-213ENST00000618327 MRPL49Q13405 166 aaKnown RBP12.77□□□□□ -0.36
CIITA-213ENST00000618327 DPY19L2P2Q6ZN68 376 aa12.77□□□□□ -0.36
CIITA-213ENST00000618327 GRINAQ7Z429 371 aa12.77□□□□□ -0.36
CIITA-213ENST00000618327 MBOAT4Q96T53 435 aa12.77□□□□□ -0.36
CIITA-213ENST00000618327 DUSP15Q9H1R2 295 aaPredicted RBP12.77□□□□□ -0.36
CIITA-213ENST00000618327 PPIL3Q9H2H8 161 aaKnown RBP12.77□□□□□ -0.36
CIITA-213ENST00000618327 PTTG1O95997 202 aa12.77□□□□□ -0.37
CIITA-213ENST00000618327 IGHG1P01857 330 aa12.77□□□□□ -0.37
CIITA-213ENST00000618327 MAS1P04201 325 aa12.77□□□□□ -0.37
CIITA-213ENST00000618327 EIF1P41567 113 aaKnown RBP12.77□□□□□ -0.37
CIITA-213ENST00000618327 CSRP3P50461 194 aa12.77□□□□□ -0.37
CIITA-213ENST00000618327 P2RX1P51575 399 aa12.77□□□□□ -0.37
CIITA-213ENST00000618327 KIF18BQ86Y91 864 aa12.77□□□□□ -0.37
CIITA-213ENST00000618327 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.77□□□□□ -0.37
CIITA-213ENST00000618327 NMNAT3Q96T66 252 aa12.77□□□□□ -0.37
CIITA-213ENST00000618327 ACTR6Q9GZN1 396 aa12.77□□□□□ -0.37
CIITA-213ENST00000618327 TWSG1Q9GZX9 223 aa12.77□□□□□ -0.37
CIITA-213ENST00000618327 SLAMF7Q9NQ25 335 aa12.77□□□□□ -0.37
CIITA-213ENST00000618327 CTSFQ9UBX1 484 aa12.77□□□□□ -0.37
CIITA-213ENST00000618327 CORINQ9Y5Q5 1042 aa12.77□□□□□ -0.37
CIITA-213ENST00000618327 PLATP00750 562 aa12.77□□□□□ -0.37
CIITA-213ENST00000618327 CD14P08571 375 aa12.77□□□□□ -0.37
CIITA-213ENST00000618327 LTBRP36941 435 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms