RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 ZNF385AQ96PM9 386 aaKnown RBP19.55■□□□□ 0.72
CBWD3-212ENST00000616550 EPYCQ99645 322 aa19.55■□□□□ 0.72
CBWD3-212ENST00000616550 ARHGDIGQ99819 225 aa19.55■□□□□ 0.72
CBWD3-212ENST00000616550 TRAV36DV7A0A075B6V5 113 aa19.54■□□□□ 0.72
CBWD3-212ENST00000616550 FMO6PO60774 539 aa19.54■□□□□ 0.72
CBWD3-212ENST00000616550 NRF1Q16656 503 aa19.54■□□□□ 0.72
CBWD3-212ENST00000616550 OR7E24Q6IFN5 339 aa19.54■□□□□ 0.72
CBWD3-212ENST00000616550 ZNF613Q6PF04 617 aa19.54■□□□□ 0.72
CBWD3-212ENST00000616550 C20orf204Q6ZNR8 217 aa19.54■□□□□ 0.72
CBWD3-212ENST00000616550 CREB3L2Q70SY1 520 aa19.54■□□□□ 0.72
CBWD3-212ENST00000616550 CCDC80Q76M96 950 aa19.54■□□□□ 0.72
CBWD3-212ENST00000616550 POU5F2Q8N7G0 328 aa19.54■□□□□ 0.72
CBWD3-212ENST00000616550 TAMM41Q96BW9 452 aa19.54■□□□□ 0.72
CBWD3-212ENST00000616550 SLC7A10Q9NS82 523 aa19.54■□□□□ 0.72
CBWD3-212ENST00000616550 F8P00451 2351 aa19.54■□□□□ 0.72
CBWD3-212ENST00000616550 MED13LQ71F56 2210 aa19.53■□□□□ 0.72
CBWD3-212ENST00000616550 IGKV1D-42A0A075B6H8 117 aa19.53■□□□□ 0.72
CBWD3-212ENST00000616550 OR5H1A6NKK0 313 aa19.53■□□□□ 0.72
CBWD3-212ENST00000616550 AIM2O14862 343 aa19.53■□□□□ 0.72
CBWD3-212ENST00000616550 PLAUP00749 431 aa19.53■□□□□ 0.72
CBWD3-212ENST00000616550 CD3EP07766 207 aa19.53■□□□□ 0.72
CBWD3-212ENST00000616550 CD247P20963 164 aa19.53■□□□□ 0.72
CBWD3-212ENST00000616550 CDH12P55289 794 aa19.53■□□□□ 0.72
CBWD3-212ENST00000616550 VEZF1Q14119 521 aa19.53■□□□□ 0.72
CBWD3-212ENST00000616550 MFSD13AQ14CX5 517 aa19.53■□□□□ 0.72
CBWD3-212ENST00000616550 NCMAPQ5T1S8 102 aa19.53■□□□□ 0.72
CBWD3-212ENST00000616550 SWT1Q5T5J6 900 aaKnown RBP19.53■□□□□ 0.72
CBWD3-212ENST00000616550 TSPO2Q5TGU0 170 aa19.53■□□□□ 0.72
CBWD3-212ENST00000616550 SPATA21Q7Z572 469 aa19.53■□□□□ 0.72
CBWD3-212ENST00000616550 P3H2Q8IVL5 708 aa19.53■□□□□ 0.72
CBWD3-212ENST00000616550 POMGNT2Q8NAT1 580 aa19.53■□□□□ 0.72
CBWD3-212ENST00000616550 OR6T1Q8NGN1 323 aa19.53■□□□□ 0.72
CBWD3-212ENST00000616550 VANGL1Q8TAA9 524 aaPredicted RBP19.53■□□□□ 0.72
CBWD3-212ENST00000616550 RCN3Q96D15 328 aa19.53■□□□□ 0.72
CBWD3-212ENST00000616550 ZNF583Q96ND8 569 aa19.53■□□□□ 0.72
CBWD3-212ENST00000616550 CCL19Q99731 98 aa19.53■□□□□ 0.72
CBWD3-212ENST00000616550 ELAC2Q9BQ52 826 aaKnown RBP19.53■□□□□ 0.72
CBWD3-212ENST00000616550 TMEM204Q9BSN7 226 aa19.53■□□□□ 0.72
CBWD3-212ENST00000616550 SLCO5A1Q9H2Y9 848 aa19.53■□□□□ 0.72
CBWD3-212ENST00000616550 ROS1P08922 2347 aa19.53■□□□□ 0.72
CBWD3-212ENST00000616550 KRT33AO76009 404 aa19.52■□□□□ 0.72
CBWD3-212ENST00000616550 ITGA5P08648 1049 aa19.52■□□□□ 0.72
CBWD3-212ENST00000616550 ZNF43P17038 809 aa19.52■□□□□ 0.72
CBWD3-212ENST00000616550 TGFBR3Q03167 851 aa19.52■□□□□ 0.72
CBWD3-212ENST00000616550 ENTPD8Q5MY95 495 aa19.52■□□□□ 0.72
CBWD3-212ENST00000616550 H1FNTQ75WM6 255 aaPredicted RBP19.52■□□□□ 0.72
CBWD3-212ENST00000616550 ABHD12BQ7Z5M8 362 aaPredicted RBP19.52■□□□□ 0.72
CBWD3-212ENST00000616550 KDM8Q8N371 416 aa19.52■□□□□ 0.72
CBWD3-212ENST00000616550 OR6S1Q8NH40 331 aa19.52■□□□□ 0.72
CBWD3-212ENST00000616550 PROX1Q92786 737 aa19.52■□□□□ 0.72
CBWD3-212ENST00000616550 MUS81Q96NY9 551 aa19.52■□□□□ 0.72
CBWD3-212ENST00000616550 OXGR1Q96P68 337 aa19.52■□□□□ 0.72
CBWD3-212ENST00000616550 B3GALT5Q9Y2C3 310 aa19.52■□□□□ 0.72
CBWD3-212ENST00000616550 RNF115Q9Y4L5 304 aa19.52■□□□□ 0.72
CBWD3-212ENST00000616550 AKAP9Q99996 3911 aa19.52■□□□□ 0.71
CBWD3-212ENST00000616550 RAI1Q7Z5J4 1906 aaPredicted RBP19.51■□□□□ 0.71
CBWD3-212ENST00000616550 CPSF4LA6NMK7 179 aaKnown RBP19.51■□□□□ 0.71
CBWD3-212ENST00000616550 M0R082 166 aa19.51■□□□□ 0.71
CBWD3-212ENST00000616550 PDLIM1O00151 329 aa19.51■□□□□ 0.71
CBWD3-212ENST00000616550 CLOCKO15516 846 aa19.51■□□□□ 0.71
CBWD3-212ENST00000616550 FZD7O75084 574 aa19.51■□□□□ 0.71
CBWD3-212ENST00000616550 IFNA14P01570 189 aa19.51■□□□□ 0.71
CBWD3-212ENST00000616550 COX4I1P13073 169 aa19.51■□□□□ 0.71
CBWD3-212ENST00000616550 MPGP29372 298 aa19.51■□□□□ 0.71
CBWD3-212ENST00000616550 GRPRP30550 384 aa19.51■□□□□ 0.71
CBWD3-212ENST00000616550 SEC24CP53992 1094 aa19.51■□□□□ 0.71
CBWD3-212ENST00000616550 FOXG1P55316 489 aaPredicted RBP19.51■□□□□ 0.71
CBWD3-212ENST00000616550 IL1RL1Q01638 556 aa19.51■□□□□ 0.71
CBWD3-212ENST00000616550 NPTX1Q15818 432 aa19.51■□□□□ 0.71
CBWD3-212ENST00000616550 C9orf135Q5VTT2 229 aa19.51■□□□□ 0.71
CBWD3-212ENST00000616550 EPHX4Q8IUS5 362 aa19.51■□□□□ 0.71
CBWD3-212ENST00000616550 OR52N5Q8NH56 324 aa19.51■□□□□ 0.71
CBWD3-212ENST00000616550 ZNF417Q8TAU3 575 aa19.51■□□□□ 0.71
CBWD3-212ENST00000616550 ZNF587Q96SQ5 575 aaPredicted RBP19.51■□□□□ 0.71
CBWD3-212ENST00000616550 PIP5K1AQ99755 562 aa19.51■□□□□ 0.71
CBWD3-212ENST00000616550 TMEM43Q9BTV4 400 aa19.51■□□□□ 0.71
CBWD3-212ENST00000616550 AP3M1Q9Y2T2 418 aa19.51■□□□□ 0.71
CBWD3-212ENST00000616550 OR6C65A6NJZ3 312 aa19.5■□□□□ 0.71
CBWD3-212ENST00000616550 FAM220BPB1ANY3 271 aa19.5■□□□□ 0.71
CBWD3-212ENST00000616550 HS3ST1O14792 307 aa19.5■□□□□ 0.71
CBWD3-212ENST00000616550 CHP2O43745 196 aa19.5■□□□□ 0.71
CBWD3-212ENST00000616550 SMPD2O60906 423 aa19.5■□□□□ 0.71
CBWD3-212ENST00000616550 CBLP22681 906 aa19.5■□□□□ 0.71
CBWD3-212ENST00000616550 BSPH1Q075Z2 132 aa19.5■□□□□ 0.71
CBWD3-212ENST00000616550 C1DQ13901 141 aaKnown RBP19.5■□□□□ 0.71
CBWD3-212ENST00000616550 GABRA6Q16445 453 aa19.5■□□□□ 0.71
CBWD3-212ENST00000616550 NIPAL3Q6P499 406 aa19.5■□□□□ 0.71
CBWD3-212ENST00000616550 SEZ6L2Q6UXD5 910 aa19.5■□□□□ 0.71
CBWD3-212ENST00000616550 ARPINQ7Z6K5 226 aa19.5■□□□□ 0.71
CBWD3-212ENST00000616550 TGIF2LYQ8IUE0 185 aa19.5■□□□□ 0.71
CBWD3-212ENST00000616550 RBM45Q8IUH3 476 aaKnown RBP19.5■□□□□ 0.71
CBWD3-212ENST00000616550 C10orf53Q8N6V4 93 aa19.5■□□□□ 0.71
CBWD3-212ENST00000616550 OR4D11Q8NGI4 311 aa19.5■□□□□ 0.71
CBWD3-212ENST00000616550 AKAP1Q92667 903 aaKnown RBP eCLIP19.5■□□□□ 0.71
CBWD3-212ENST00000616550 ASPNQ9BXN1 380 aa19.5■□□□□ 0.71
CBWD3-212ENST00000616550 NSRP1Q9H0G5 558 aaKnown RBP19.5■□□□□ 0.71
CBWD3-212ENST00000616550 SEC14L4Q9UDX3 406 aa19.5■□□□□ 0.71
CBWD3-212ENST00000616550 BAG5Q9UL15 447 aa19.5■□□□□ 0.71
CBWD3-212ENST00000616550 USP22Q9UPT9 525 aa19.5■□□□□ 0.71
CBWD3-212ENST00000616550 SH3GLB1Q9Y371 365 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms