RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 MCATQ8IVS2 390 aaKnown RBP12.35□□□□□ -0.43
PCDHA11-202ENST00000616325 FGF11Q92914 225 aa12.35□□□□□ -0.43
PCDHA11-202ENST00000616325 ZNF285Q96NJ3 590 aa12.35□□□□□ -0.43
PCDHA11-202ENST00000616325 RNF215Q9Y6U7 377 aa12.35□□□□□ -0.43
PCDHA11-202ENST00000616325 OTOL1A6NHN0 477 aaPredicted RBP12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 IDSB3KWA1 339 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 LILRB5O75023 590 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 NFATC1O95644 943 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 FBXO45P0C2W1 286 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 TMIGD3P0DMS9 266 aaPredicted RBP12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 APEHP13798 732 aaKnown RBP12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 LAG3P18627 525 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 ZNF234Q14588 700 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 DEFB115Q30KQ5 88 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 FAM111BQ6SJ93 734 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 LCTLQ6UWM7 567 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 CD300LDQ6UXZ3 194 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 GDF7Q7Z4P5 450 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 LRRTM1Q86UE6 522 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 CRIPAKQ8N1N5 446 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 OR2AK2Q8NG84 335 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 OR14A16Q8NHC5 309 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 SUSD6Q92537 303 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 MS4A4EQ96PG1 132 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 CD180Q99467 661 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 PBX4Q9BYU1 374 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 FN3KQ9H479 309 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 SPHK1Q9NYA1 384 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 DPP7Q9UHL4 492 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 CDV3Q9UKY7 258 aaKnown RBP12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 ICKQ9UPZ9 632 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 A0A1B0GVT2 93 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 OR2AT4A6NND4 320 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 ABCD4O14678 606 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 AGPAT2O15120 278 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 GTF2F2P13984 249 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 CDK2P24941 298 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 SNRPNP63162 240 aaKnown RBP12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 MAT1AQ00266 395 aaKnown RBP12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 CRMP1Q14194 572 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 ZNF626Q68DY1 528 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 NIPAL3Q6P499 406 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 FRRS1Q6ZNA5 592 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 ZNF620Q6ZNG0 422 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 SVBPQ8N300 66 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 FAM98AQ8NCA5 519 aaKnown RBP12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 OR6K6Q8NGW6 343 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 OR4C6Q8NH72 309 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 INSM2Q96T92 566 aaPredicted RBP12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 SLC38A1Q9H2H9 487 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 PRMT8Q9NR22 394 aaPredicted RBP12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 MBNL1Q9NR56 388 aaKnown RBP12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 ABRACLQ9P1F3 81 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 PCDHB10Q9UN67 800 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 EXOGQ9Y2C4 368 aaKnown RBP12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 NPFFR2Q9Y5X5 522 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 PRKNO60260 465 aaPredicted RBP12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 LDB3O75112 727 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 CNR1P21554 472 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 FAM71CQ8NEG0 241 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 OR1M1Q8NGA1 313 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 OR51S1Q8NGJ8 323 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 ACOT11Q8WXI4 607 aaPredicted RBP12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 TCEAL3Q969E4 200 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 PEX11GQ96HA9 241 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 FBXO34Q9NWN3 711 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 COMMD9Q9P000 198 aa12.34□□□□□ -0.43
PCDHA11-202ENST00000616325 PEX12O00623 359 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 RBBP9O75884 186 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 CEBPBP17676 345 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 HIST1H1TP22492 207 aaPredicted RBP12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 OR7A5Q15622 319 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 MAPK14Q16539 360 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 GID4Q8IVV7 300 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 OR5K2Q8NHB8 316 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 CAMK1GQ96NX5 476 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 SYNDIG1Q9H7V2 258 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 CREBZFQ9NS37 354 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 IL20Q9NYY1 176 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 DEC1Q9P2X7 70 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 RIIAD1A6NNX1 92 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 SPINT1O43278 529 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 PPP1R3DO95685 299 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 MAS1P04201 325 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 LAMP2P13473 410 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 ITPKBP27987 946 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 GUCA2AQ02747 115 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 SRSF5Q13243 272 aaKnown RBP12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 UBXN2BQ14CS0 331 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 SETD7Q8WTS6 366 aaKnown RBP12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 AHCYL2Q96HN2 611 aaKnown RBP12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 PTDSS2Q9BVG9 487 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 MYEF2Q9P2K5 600 aaKnown RBP12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 ZMIZ1Q9ULJ6 1067 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 LAMA1P25391 3075 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 GABARAPH6UMI1 98 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 PLPP2O43688 288 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 DNAJB6O75190 326 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 SLC25A12O75746 678 aa12.33□□□□□ -0.44
PCDHA11-202ENST00000616325 P2RX1P51575 399 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms