RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 CDKN2BP42772 138 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 SLC18A1P54219 525 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 MS4A18Q3C1V0 323 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 DTD1Q8TEA8 209 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 HECW2Q9P2P5 1572 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 METTL15A6NJ78 407 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 C2CD4BA6NLJ0 364 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 HPNP05981 417 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 MPC1LP0DKB6 136 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 C7P10643 843 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 LTB4RQ15722 352 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 SLC15A4Q8N697 577 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 PTBP2Q9UKA9 531 aaKnown RBP11.79□□□□□ -0.52
TCF4-248ENST00000616053 ALOX12BO75342 701 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 ORM1P02763 201 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 STSP08842 583 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 AADACP22760 399 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 SMUG1Q53HV7 270 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 KMT5CQ86Y97 462 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 AAMDCQ9H7C9 122 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 DTLQ9NZJ0 730 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 DNAJB4Q9UDY4 337 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 OAZ3Q9UMX2 235 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 ANTXRLA6NF34 631 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 RNASE1P07998 156 aaKnown RBP11.79□□□□□ -0.52
TCF4-248ENST00000616053 SDC1P18827 310 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 MAP2K3P46734 347 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 ZNF91Q05481 1191 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 TMEM211Q6ICI0 200 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 WDR5BQ86VZ2 330 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 MS4A15Q8N5U1 240 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 KIAA1958Q8N8K9 716 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 C10orf82Q8WW14 230 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 ADAMTS5Q9UNA0 930 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 IER3IP1Q9Y5U9 82 aa11.79□□□□□ -0.52
TCF4-248ENST00000616053 KIR2DL1P43626 348 aaPredicted RBP11.78□□□□□ -0.52
TCF4-248ENST00000616053 KIR2DL2P43627 348 aaPredicted RBP11.78□□□□□ -0.52
TCF4-248ENST00000616053 WNT7BP56706 349 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 DCAF7P61962 342 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 MANEALQ5VSG8 457 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 NRMQ8IXM6 262 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 HUS1BQ8NHY5 278 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 MAELQ96JY0 434 aaKnown RBP11.78□□□□□ -0.52
TCF4-248ENST00000616053 PRRT1Q99946 306 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 PRAMEF11O60813 436 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 SLITRK5O94991 958 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 SFT2D3Q587I9 215 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 OR8G2PQ6IF36 304 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 SMG8Q8ND04 991 aaKnown RBP11.78□□□□□ -0.52
TCF4-248ENST00000616053 TMEM40Q8WWA1 233 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 ZMYND19Q96E35 227 aaPredicted RBP11.78□□□□□ -0.52
TCF4-248ENST00000616053 AMBRA1Q9C0C7 1298 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 RAB18Q9NP72 206 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 PRSS38A1L453 326 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 GPR37O15354 613 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 EIF1BO60739 113 aaKnown RBP11.78□□□□□ -0.52
TCF4-248ENST00000616053 GLRA1P23415 457 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 DUSP2Q05923 314 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 MFAP5Q13361 173 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 ZNF628Q5EBL2 1059 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 LYRM7Q5U5X0 104 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 CBLCQ9ULV8 474 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 CDX4O14627 284 aaPredicted RBP11.78□□□□□ -0.52
TCF4-248ENST00000616053 TFP02787 698 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 IRS1P35568 1242 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 PAFAH1B2P68402 229 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 NADSYN1Q6IA69 706 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 OR8J1Q8NGP2 316 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 DPH1Q9BZG8 443 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 ZNF346Q9UL40 294 aaKnown RBP11.78□□□□□ -0.52
TCF4-248ENST00000616053 OR10A3P58181 314 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 UBE2MP61081 183 aaKnown RBP11.78□□□□□ -0.52
TCF4-248ENST00000616053 C17orf78Q8N4C9 275 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 SOX7Q9BT81 388 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 RAB1BQ9H0U4 201 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 GLTPQ9NZD2 209 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 KIF21AQ7Z4S6 1674 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 OR52A4PA6NMU1 304 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 A8MV72 311 aaPredicted RBP11.78□□□□□ -0.52
TCF4-248ENST00000616053 SLC35E2BP0CK96 405 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 QPCTQ16769 361 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 GTF2H5Q6ZYL4 71 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 ESRP2Q9H6T0 727 aaKnown RBP11.78□□□□□ -0.52
TCF4-248ENST00000616053 PREBQ9HCU5 417 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 ZNF71Q9NQZ8 489 aaPredicted RBP11.78□□□□□ -0.52
TCF4-248ENST00000616053 IGHV3-64DA0A0J9YX35 117 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 AQP12BA6NM10 295 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 SULT1C2O00338 296 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 SPDEFO95238 335 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 HLA-HP01893 362 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 RETP07949 1114 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 LIPCP11150 499 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 CEBPBP17676 345 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 MEF2DQ14814 521 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 BPIFB2Q8N4F0 458 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 ZFP41Q8N8Y5 198 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 OR51E2Q9H255 320 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 ZCCHC4Q9H5U6 513 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 GALNT9Q9HCQ5 603 aa11.78□□□□□ -0.52
TCF4-248ENST00000616053 HHLA2Q9UM44 414 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms