RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 PLSCR5A0PG75 271 aa12.02□□□□□ -0.49
FOXN3-219ENST00000615335 ANXA2P2A6NMY6 339 aa12.02□□□□□ -0.49
FOXN3-219ENST00000615335 GDF9O60383 454 aa12.02□□□□□ -0.49
FOXN3-219ENST00000615335 TBX19O60806 448 aa12.02□□□□□ -0.49
FOXN3-219ENST00000615335 RGS11O94810 467 aa12.02□□□□□ -0.49
FOXN3-219ENST00000615335 SLC35G6P0C7Q6 338 aa12.02□□□□□ -0.49
FOXN3-219ENST00000615335 BTCP35070 178 aa12.02□□□□□ -0.49
FOXN3-219ENST00000615335 SMIM11AP58511 58 aa12.02□□□□□ -0.49
FOXN3-219ENST00000615335 HEPACAMQ14CZ8 416 aa12.02□□□□□ -0.49
FOXN3-219ENST00000615335 DEFB110Q30KQ9 67 aa12.02□□□□□ -0.49
FOXN3-219ENST00000615335 ANKRD39Q53RE8 183 aa12.02□□□□□ -0.49
FOXN3-219ENST00000615335 TMEM71Q6P5X7 295 aa12.02□□□□□ -0.49
FOXN3-219ENST00000615335 RNF44Q7L0R7 432 aa12.02□□□□□ -0.49
FOXN3-219ENST00000615335 VN1R4Q7Z5H5 301 aa12.02□□□□□ -0.49
FOXN3-219ENST00000615335 OR52P1PQ8NH57 321 aa12.02□□□□□ -0.49
FOXN3-219ENST00000615335 ZNF354BQ96LW1 612 aa12.02□□□□□ -0.49
FOXN3-219ENST00000615335 TMEM68Q96MH6 324 aa12.02□□□□□ -0.49
FOXN3-219ENST00000615335 ZNF607Q96SK3 696 aa12.02□□□□□ -0.49
FOXN3-219ENST00000615335 SAP130Q9H0E3 1048 aa12.02□□□□□ -0.49
FOXN3-219ENST00000615335 PDE7BQ9NP56 450 aa12.02□□□□□ -0.49
FOXN3-219ENST00000615335 SEMA3GQ9NS98 782 aa12.02□□□□□ -0.49
FOXN3-219ENST00000615335 SPTBP11277 2137 aa12.02□□□□□ -0.49
FOXN3-219ENST00000615335 LRIT2A6NDA9 550 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 H0YGG7 62 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 SLC28A2O43868 658 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 PRKYO43930 277 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 SEMA7AO75326 666 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 HPP00738 406 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 NFYAP23511 347 aaPredicted RBP12.01□□□□□ -0.49
FOXN3-219ENST00000615335 BSGP35613 385 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 ARF3P61204 181 aaPredicted RBP12.01□□□□□ -0.49
FOXN3-219ENST00000615335 GK2Q14410 553 aaPredicted RBP12.01□□□□□ -0.49
FOXN3-219ENST00000615335 GSG1Q2KHT4 349 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 PGBD2Q6P3X8 592 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 RBM45Q8IUH3 476 aaKnown RBP12.01□□□□□ -0.49
FOXN3-219ENST00000615335 SKA3Q8IX90 412 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 RNF113BQ8IZP6 322 aaKnown RBP12.01□□□□□ -0.49
FOXN3-219ENST00000615335 SPAG16Q8N0X2 631 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 TCEANCQ8N8B7 351 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 OR8J1Q8NGP2 316 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 EDARADDQ8WWZ3 215 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 ACOT12Q8WYK0 555 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 UBL7Q96S82 380 aaPredicted RBP12.01□□□□□ -0.49
FOXN3-219ENST00000615335 ATF6BQ99941 703 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 THAP7Q9BT49 309 aaPredicted RBP12.01□□□□□ -0.49
FOXN3-219ENST00000615335 TSSK6Q9BXA6 273 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 RSPO3Q9BXY4 272 aaPredicted RBP12.01□□□□□ -0.49
FOXN3-219ENST00000615335 SPRTNQ9H040 489 aaPredicted RBP12.01□□□□□ -0.49
FOXN3-219ENST00000615335 KLHL31Q9H511 634 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 METTL17Q9H7H0 456 aaPredicted RBP12.01□□□□□ -0.49
FOXN3-219ENST00000615335 SEBOXQ9HB31 216 aaPredicted RBP12.01□□□□□ -0.49
FOXN3-219ENST00000615335 HMGN4O00479 90 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 HCRTR1O43613 425 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 GAAP10253 952 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 SPP1P10451 314 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 HPGDP15428 266 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 PPP3CBP16298 524 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 ACP1P24666 158 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 FGF9P31371 208 aaPredicted RBP12.01□□□□□ -0.49
FOXN3-219ENST00000615335 EIF2S3P41091 472 aaKnown RBP12.01□□□□□ -0.49
FOXN3-219ENST00000615335 KCNJ3P48549 501 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 SQSTM1Q13501 440 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 ZNF574Q6ZN55 896 aaPredicted RBP12.01□□□□□ -0.49
FOXN3-219ENST00000615335 SVBPQ8N300 66 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 OR4D11Q8NGI4 311 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 TM9SF4Q92544 642 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 EXOSC8Q96B26 276 aaKnown RBP12.01□□□□□ -0.49
FOXN3-219ENST00000615335 RGMAQ96B86 450 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 SPOCK3Q9BQ16 436 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 CRB3Q9BUF7 120 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 SLC25A32Q9H2D1 315 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 SIRT3Q9NTG7 399 aaPredicted RBP12.01□□□□□ -0.49
FOXN3-219ENST00000615335 C5AR2Q9P296 337 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 ZNF292O60281 2723 aa12.01□□□□□ -0.49
FOXN3-219ENST00000615335 SCN3AQ9NY46 2000 aa12□□□□□ -0.49
FOXN3-219ENST00000615335 CASKO14936 926 aa12□□□□□ -0.49
FOXN3-219ENST00000615335 B4GALT2O60909 372 aa12□□□□□ -0.49
FOXN3-219ENST00000615335 ATG12O94817 140 aa12□□□□□ -0.49
FOXN3-219ENST00000615335 SLC34A2O95436 690 aa12□□□□□ -0.49
FOXN3-219ENST00000615335 CXCL2P19875 107 aa12□□□□□ -0.49
FOXN3-219ENST00000615335 PAICSP22234 425 aaKnown RBP12□□□□□ -0.49
FOXN3-219ENST00000615335 AHCYP23526 432 aa12□□□□□ -0.49
FOXN3-219ENST00000615335 S100A11P31949 105 aa12□□□□□ -0.49
FOXN3-219ENST00000615335 PCBP4P57723 403 aaKnown RBP12□□□□□ -0.49
FOXN3-219ENST00000615335 STXBP1P61764 594 aaKnown RBP12□□□□□ -0.49
FOXN3-219ENST00000615335 HSD11B2P80365 405 aa12□□□□□ -0.49
FOXN3-219ENST00000615335 COL9A2Q14055 689 aaPredicted RBP12□□□□□ -0.49
FOXN3-219ENST00000615335 OCLNQ16625 522 aa12□□□□□ -0.49
FOXN3-219ENST00000615335 ST3GAL2Q16842 350 aa12□□□□□ -0.49
FOXN3-219ENST00000615335 DHRS7BQ6IAN0 325 aaPredicted RBP12□□□□□ -0.49
FOXN3-219ENST00000615335 ALKAL2Q6UX46 152 aa12□□□□□ -0.49
FOXN3-219ENST00000615335 QSOX2Q6ZRP7 698 aa12□□□□□ -0.49
FOXN3-219ENST00000615335 WDR53Q7Z5U6 358 aaPredicted RBP12□□□□□ -0.49
FOXN3-219ENST00000615335 LAPTM4BQ86VI4 370 aa12□□□□□ -0.49
FOXN3-219ENST00000615335 CARFQ8N187 725 aa12□□□□□ -0.49
FOXN3-219ENST00000615335 OR5M9Q8NGP3 310 aa12□□□□□ -0.49
FOXN3-219ENST00000615335 SLC22A11Q9NSA0 550 aa12□□□□□ -0.49
FOXN3-219ENST00000615335 STARD5Q9NSY2 213 aa12□□□□□ -0.49
FOXN3-219ENST00000615335 DMRT1Q9Y5R6 373 aa12□□□□□ -0.49
FOXN3-219ENST00000615335 NINQ8N4C6 2090 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms