RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 NXNL2Q5VZ03 156 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 TMEM88Q6PEY1 159 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 PODNL1Q6PEZ8 512 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 OR8D4Q8NGM9 314 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 OR1S1Q8NH92 325 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 TMEM68Q96MH6 324 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 DUSP23Q9BVJ7 150 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 UBQLN3Q9H347 655 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 SRPK3Q9UPE1 567 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 GAB2Q9UQC2 676 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 MEIS3P2A8K0S8 358 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 PHOX2AO14813 284 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 GPX5O75715 221 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 TRAPPC6AO75865 159 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 LPLP06858 475 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 HNRNPA2B1P22626 353 aaKnown RBP6.41□□□□□ -1.38
CLCN3-211ENST00000613795 CX3CR1P49238 355 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 F2RL1P55085 397 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 SRPXP78539 464 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 FAM189BP81408 668 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 P2RY14Q15391 338 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 TMEM225Q6GV28 225 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 OVCH1Q7RTY7 1134 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 ZNF610Q8N9Z0 462 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 ZNF439Q8NDP4 499 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 ACVR1CQ8NER5 493 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 OR1J1Q8NGS3 322 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 HUS1BQ8NHY5 278 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 TIMM29Q9BSF4 260 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 SPACA1Q9HBV2 294 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 ALKBH4Q9NXW9 302 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 SLC6A14Q9UN76 642 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 ELOA3CA0A087WX78 387 aaPredicted RBP6.4□□□□□ -1.38
CLCN3-211ENST00000613795 A0A1W2PQU0 124 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 MTX2O75431 263 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 KIR2DL3P43628 341 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 DAP3P51398 398 aaKnown RBP6.4□□□□□ -1.38
CLCN3-211ENST00000613795 OR2B8PP59922 312 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 DCAF7P61962 342 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 SLC7A9P82251 487 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 TNK1Q13470 666 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 FAM182AQ5T1J6 154 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 LCN10Q6JVE6 187 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 FIGNL1Q6PIW4 674 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 LRFN4Q6PJG9 635 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 Q6ZVL8 140 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 SLC43A2Q8N370 569 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 RBMXL1Q96E39 390 aaKnown RBP6.4□□□□□ -1.38
CLCN3-211ENST00000613795 SORCS2Q96PQ0 1159 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 OR2A14Q96R47 310 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 INTS14Q96SY0 518 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 ZIC5Q96T25 663 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 NICN1Q9BSH3 213 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 SRA1Q9HD15 236 aaKnown RBP6.4□□□□□ -1.38
CLCN3-211ENST00000613795 TREX1Q9NSU2 369 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 ADAM29Q9UKF5 820 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 A0A1B0GTW7 788 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 MDFIC2A0A1B0GVS7 189 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 C2orf78A6NCI8 922 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 I6L893 689 aaPredicted RBP6.4□□□□□ -1.38
CLCN3-211ENST00000613795 SOX1O00570 391 aaPredicted RBP6.4□□□□□ -1.38
CLCN3-211ENST00000613795 MSTNO14793 375 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 GJB5O95377 273 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 GASTP01350 101 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 CBLP22681 906 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 HTR1FP30939 366 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 AKR1C2P52895 323 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 ACSM1Q08AH1 577 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 SLC35G1Q2M3R5 365 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 USP51Q70EK9 711 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 UBAC2Q8NBM4 344 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 NAXEQ8NCW5 288 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 BORCS8Q96FH0 119 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 CNIH4Q9P003 139 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 APOBEC3BQ9UH17 382 aaKnown RBP6.4□□□□□ -1.38
CLCN3-211ENST00000613795 SLC35A3Q9Y2D2 325 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 PKD1L3Q7Z443 1732 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 A0A0J9YY10 115 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 A0A0U1RQK1 487 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 M0R143 59 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 KIAA0355O15063 1070 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 CALCBP10092 127 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 SHC1P29353 583 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 CRABP1P29762 137 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 THBS2P35442 1172 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 TNFRSF4P43489 277 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 GATMP50440 423 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 PTPRCAPQ14761 206 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 NR0B2Q15466 257 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 TMEM244Q5VVB8 128 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 ABLIM2Q6H8Q1 611 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 C5orf46Q6UWT4 87 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 PRSS58Q8IYP2 241 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 OR4F15Q8NGB8 312 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 CRYGNQ8WXF5 182 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 OR1E3Q8WZA6 343 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 PDLIM5Q96HC4 596 aaKnown RBP6.4□□□□□ -1.38
CLCN3-211ENST00000613795 SEC22AQ96IW7 307 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 TOX2Q96NM4 488 aa6.4□□□□□ -1.38
CLCN3-211ENST00000613795 ATOH8Q96SQ7 321 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms