RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 THNSL2Q86YJ6 484 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 FAM26EQ8N5C1 309 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 CIB3Q96Q77 187 aaPredicted RBP4.63□□□□□ -1.67
VPS13D-213ENST00000613099 ACO2Q99798 780 aaKnown RBP4.63□□□□□ -1.67
VPS13D-213ENST00000613099 PRRX2Q99811 253 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 KATNB1Q9BVA0 655 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 AMBRA1Q9C0C7 1298 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 PORCNQ9H237 461 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 M0R1X1 148 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 FFAR2O15552 330 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 CXADRP78310 365 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 SH3BP2P78314 561 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF805Q5CZA5 627 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 MED27Q6P2C8 311 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 NANOGP1Q8N7R0 232 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 RELL2Q8NC24 303 aaPredicted RBP4.63□□□□□ -1.67
VPS13D-213ENST00000613099 FAM213BQ8TBF2 198 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 GLYATL1Q969I3 302 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 HHIPQ96QV1 700 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 FCRL5Q96RD9 977 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 C20orf24Q9BUV8 137 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 POLDIP3Q9BY77 421 aaKnown RBP4.63□□□□□ -1.67
VPS13D-213ENST00000613099 WNT5BQ9H1J7 359 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 PIEZO1Q92508 2521 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 CDRT15L2A8MXV6 281 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 OR7C2O60412 319 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 SH3BGRLO75368 114 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 USF1P22415 310 aaPredicted RBP4.63□□□□□ -1.67
VPS13D-213ENST00000613099 RAD52P43351 418 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 AKR1C1Q04828 323 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 NFATC2Q13469 925 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 TMPRSS12Q86WS5 348 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 GPR135Q8IZ08 494 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 ADAD1Q96M93 576 aaKnown RBP4.63□□□□□ -1.67
VPS13D-213ENST00000613099 PCTPQ9UKL6 214 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF354AO60765 605 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-213ENST00000613099 H2AFB1P0C5Y9 115 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 BLKP51451 505 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 ERFEQ4G0M1 354 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF628Q5EBL2 1059 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 USP50Q70EL3 339 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-213ENST00000613099 OR6T1Q8NGN1 323 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 V9GY05 133 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 A0A1W2PPH5 198 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 DRGXA6NNA5 263 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 H0Y8G0 127 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 CYC1P08574 325 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 CD37P11049 281 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 TMEM244Q5VVB8 128 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 SFXN4Q6P4A7 337 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 OR51G2Q8NGK0 314 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 OR51B6Q9H340 312 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 MYOZ1Q9NP98 299 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-213ENST00000613099 ABT1Q9ULW3 272 aaKnown RBP4.62□□□□□ -1.67
VPS13D-213ENST00000613099 RECQL4O94761 1208 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 C22orf31O95567 290 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 RENP00797 406 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 LRRTM1Q86UE6 522 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF100Q8IYN0 542 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 TEX29Q8N6K0 151 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 LYSMD1Q96S90 227 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 AK6Q9Y3D8 172 aaKnown RBP4.62□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF780BQ9Y6R6 833 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 ADAMTSL1Q8N6G6 1762 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 I6L893 689 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-213ENST00000613099 AKR7A3O95154 331 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 OR12D1P0DN82 309 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 SMN1Q16637 294 aaKnown RBP4.62□□□□□ -1.67
VPS13D-213ENST00000613099 ALG10BQ5I7T1 473 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 FFAR4Q5NUL3 377 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 OR9A2Q8NGT5 310 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF226Q9NYT6 803 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 FBXO10Q9UK96 956 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 TP53TG5Q9Y2B4 290 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 DUXAA6NLW8 204 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 TPST2O60704 377 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 NDUFV2P19404 249 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 TEX26Q8N6G2 289 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 PQLC3Q8N755 202 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 ZFP41Q8N8Y5 198 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 NUDCD2Q8WVJ2 157 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 SYT3Q9BQG1 590 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF430Q9H8G1 570 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-213ENST00000613099 IL19Q9UHD0 177 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 NUP214P35658 2090 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-213ENST00000613099 C2orf78A6NCI8 922 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 LRP3O75074 770 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 CLN3Q13286 438 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 MPEG1Q2M385 716 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 ATXN7L2Q5T6C5 722 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-213ENST00000613099 TMEM150AQ86TG1 271 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 RCBTB1Q8NDN9 531 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 AQP7P3A6NL99 342 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 OR52A4PA6NMU1 304 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 HAS3O00219 553 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 OR1E1P30953 314 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 KLF3P57682 345 aaPredicted RBP4.62□□□□□ -1.67
VPS13D-213ENST00000613099 SRPXP78539 464 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 FPGSQ05932 587 aa4.62□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF266Q14584 549 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms