RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 LCN1P31025 176 aa12.88□□□□□ -0.35
COL6A1-207ENST00000612273 RPS11P62280 158 aaKnown RBP eCLIP12.88□□□□□ -0.35
COL6A1-207ENST00000612273 BDH1Q02338 343 aa12.88□□□□□ -0.35
COL6A1-207ENST00000612273 NLRC3Q7RTR2 1065 aa12.88□□□□□ -0.35
COL6A1-207ENST00000612273 LIX1LQ8IVB5 337 aa12.88□□□□□ -0.35
COL6A1-207ENST00000612273 PRR22Q8IZ63 422 aa12.88□□□□□ -0.35
COL6A1-207ENST00000612273 FAM174AQ8TBP5 190 aa12.88□□□□□ -0.35
COL6A1-207ENST00000612273 MYADMQ96S97 322 aa12.88□□□□□ -0.35
COL6A1-207ENST00000612273 KLHDC3Q9BQ90 382 aa12.88□□□□□ -0.35
COL6A1-207ENST00000612273 GINS4Q9BRT9 223 aa12.88□□□□□ -0.35
COL6A1-207ENST00000612273 HRASLSQ9HDD0 168 aa12.88□□□□□ -0.35
COL6A1-207ENST00000612273 ASXL3Q9C0F0 2248 aa12.88□□□□□ -0.35
COL6A1-207ENST00000612273 C7orf66A4D0T2 115 aa12.88□□□□□ -0.35
COL6A1-207ENST00000612273 CDC14CA4D256 554 aa12.88□□□□□ -0.35
COL6A1-207ENST00000612273 ZNF10P21506 573 aaPredicted RBP12.88□□□□□ -0.35
COL6A1-207ENST00000612273 RAB14P61106 215 aa12.88□□□□□ -0.35
COL6A1-207ENST00000612273 SFRP5Q5T4F7 317 aa12.88□□□□□ -0.35
COL6A1-207ENST00000612273 ARHGAP11AQ6P4F7 1023 aa12.88□□□□□ -0.35
COL6A1-207ENST00000612273 ALKAL2Q6UX46 152 aa12.88□□□□□ -0.35
COL6A1-207ENST00000612273 NUDT18Q6ZVK8 323 aa12.88□□□□□ -0.35
COL6A1-207ENST00000612273 BMFQ96LC9 184 aa12.88□□□□□ -0.35
COL6A1-207ENST00000612273 OR2M2Q96R28 347 aa12.88□□□□□ -0.35
COL6A1-207ENST00000612273 TMEM106CQ9BVX2 250 aa12.88□□□□□ -0.35
COL6A1-207ENST00000612273 C1QTNF7Q9BXJ2 289 aa12.88□□□□□ -0.35
COL6A1-207ENST00000612273 MKKSQ9NPJ1 570 aaPredicted RBP12.88□□□□□ -0.35
COL6A1-207ENST00000612273 DUSP22Q9NRW4 184 aa12.88□□□□□ -0.35
COL6A1-207ENST00000612273 DCTN6O00399 190 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 PLGP00747 810 aaPredicted RBP12.87□□□□□ -0.35
COL6A1-207ENST00000612273 SLC2A5P22732 501 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 PTBP1P26599 531 aaKnown RBP eCLIP12.87□□□□□ -0.35
COL6A1-207ENST00000612273 ACAA2P42765 397 aaKnown RBP12.87□□□□□ -0.35
COL6A1-207ENST00000612273 CCR9P51686 369 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 PITPNAQ00169 270 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 ZNHIT3Q15649 155 aaPredicted RBP12.87□□□□□ -0.35
COL6A1-207ENST00000612273 TCTE1Q5JU00 501 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 OR11G2Q8NGC1 345 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 OR51A4Q8NGJ6 313 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 THEM6Q8WUY1 208 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 RIT1Q92963 219 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 SLC22A18Q96BI1 424 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 NXPE2Q96DL1 559 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 SGTBQ96EQ0 304 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 MED30Q96HR3 178 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 ADAD1Q96M93 576 aaKnown RBP12.87□□□□□ -0.35
COL6A1-207ENST00000612273 GAS2L1Q99501 681 aaPredicted RBP12.87□□□□□ -0.35
COL6A1-207ENST00000612273 CRISPLD2Q9H0B8 497 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 TCF7L1Q9HCS4 588 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 TAS2R10Q9NYW0 307 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 ERVK-19Q9WJR5 959 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 K7EQS6 105 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 CYR61O00622 381 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 HLA-DQA2P01906 255 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 HPGDP15428 266 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 SPI1P17947 270 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 HSF2Q03933 536 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 LINC00303Q3SY05 128 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 FHL5Q5TD97 284 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 SAMD14Q8IZD0 417 aaPredicted RBP12.87□□□□□ -0.35
COL6A1-207ENST00000612273 TOR1AIP2Q8NFQ8 470 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 COQ8AQ8NI60 647 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 DVL3Q92997 716 aaPredicted RBP12.87□□□□□ -0.35
COL6A1-207ENST00000612273 WDR92Q96MX6 357 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 CFHR5Q9BXR6 569 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 HEXA-AS1Q9H8Q6 139 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 NOX3Q9HBY0 568 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 NRIP3Q9NQ35 241 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 DNAJB12Q9NXW2 375 aaKnown RBP12.87□□□□□ -0.35
COL6A1-207ENST00000612273 KLF15Q9UIH9 416 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 ELF5Q9UKW6 265 aaPredicted RBP12.87□□□□□ -0.35
COL6A1-207ENST00000612273 KLHDC2Q9Y2U9 406 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 NPFFR2Q9Y5X5 522 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 HEBP2Q9Y5Z4 205 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 GPR89AB7ZAQ6 455 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 C11orf98E9PRG8 122 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 KHNYNO15037 678 aaKnown RBP12.87□□□□□ -0.35
COL6A1-207ENST00000612273 PEX14O75381 377 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 GPR89BP0CG08 455 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 ST6GAL1P15907 406 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 CDK2P24941 298 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 MMP15P51511 669 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 ENPP2Q13822 863 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 ITPRIPL2Q3MIP1 535 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 CD276Q5ZPR3 534 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 OR5M10Q6IEU7 315 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 FAM198BQ6UWH4 519 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 LRRC69Q6ZNQ3 347 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 OR6N2Q8NGY6 317 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 PPP1R14AQ96A00 147 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 ZMAT3Q9HA38 289 aaKnown RBP12.87□□□□□ -0.35
COL6A1-207ENST00000612273 EMC7Q9NPA0 242 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 B3GNT2Q9NY97 397 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 WDFY3Q8IZQ1 3526 aa12.87□□□□□ -0.35
COL6A1-207ENST00000612273 RP1P56715 2156 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 ARPC5O15511 151 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 ATP1B1P05026 303 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 PSMB1P20618 241 aaKnown RBP12.86□□□□□ -0.35
COL6A1-207ENST00000612273 PBX2P40425 430 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 TSFMP43897 325 aaKnown RBP12.86□□□□□ -0.35
COL6A1-207ENST00000612273 KIAA1024LP59773 190 aa12.86□□□□□ -0.35
COL6A1-207ENST00000612273 ACTC1P68032 377 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms