RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 SDR9C7Q8NEX9 313 aa20.52■□□□□ 0.87
SHANK2-220ENST00000608988 OR4K13Q8NH42 304 aa20.52■□□□□ 0.87
SHANK2-220ENST00000608988 TM4SF19Q96DZ7 209 aa20.52■□□□□ 0.87
SHANK2-220ENST00000608988 SLC25A32Q9H2D1 315 aa20.52■□□□□ 0.87
SHANK2-220ENST00000608988 CYB5R1Q9UHQ9 305 aa20.52■□□□□ 0.87
SHANK2-220ENST00000608988 SLC22A7Q9Y694 548 aa20.52■□□□□ 0.87
SHANK2-220ENST00000608988 ARPC4-TTLL3A0A0A6YYG9 625 aa20.51■□□□□ 0.87
SHANK2-220ENST00000608988 D6RAR5 112 aa20.51■□□□□ 0.87
SHANK2-220ENST00000608988 ARPC3O15145 178 aa20.51■□□□□ 0.87
SHANK2-220ENST00000608988 NDUFA2O43678 99 aa20.51■□□□□ 0.87
SHANK2-220ENST00000608988 ZNF432O94892 652 aa20.51■□□□□ 0.87
SHANK2-220ENST00000608988 RPA2P15927 270 aa20.51■□□□□ 0.87
SHANK2-220ENST00000608988 ERVFC1P60507 584 aa20.51■□□□□ 0.87
SHANK2-220ENST00000608988 IRF4Q15306 451 aa20.51■□□□□ 0.87
SHANK2-220ENST00000608988 TRMT12Q53H54 448 aaKnown RBP20.51■□□□□ 0.87
SHANK2-220ENST00000608988 ZNF433Q8N7K0 673 aaPredicted RBP20.51■□□□□ 0.87
SHANK2-220ENST00000608988 ZNF784Q8NCA9 323 aaPredicted RBP20.51■□□□□ 0.87
SHANK2-220ENST00000608988 OR10Z1Q8NGY1 313 aa20.51■□□□□ 0.87
SHANK2-220ENST00000608988 OR6K3Q8NGY3 331 aa20.51■□□□□ 0.87
SHANK2-220ENST00000608988 GRHL3Q8TE85 626 aa20.51■□□□□ 0.87
SHANK2-220ENST00000608988 ORAI1Q96D31 301 aa20.51■□□□□ 0.87
SHANK2-220ENST00000608988 CFHR5Q9BXR6 569 aa20.51■□□□□ 0.87
SHANK2-220ENST00000608988 NMNAT2Q9BZQ4 307 aa20.51■□□□□ 0.87
SHANK2-220ENST00000608988 DNTTIP1Q9H147 329 aa20.51■□□□□ 0.87
SHANK2-220ENST00000608988 ADAP2Q9NPF8 381 aa20.51■□□□□ 0.87
SHANK2-220ENST00000608988 MBNL1Q9NR56 388 aaKnown RBP20.51■□□□□ 0.87
SHANK2-220ENST00000608988 FLRT3Q9NZU0 649 aa20.51■□□□□ 0.87
SHANK2-220ENST00000608988 DAPP1Q9UN19 280 aa20.51■□□□□ 0.87
SHANK2-220ENST00000608988 SLC17A4Q9Y2C5 497 aa20.51■□□□□ 0.87
SHANK2-220ENST00000608988 OR1A2Q9Y585 309 aa20.51■□□□□ 0.87
SHANK2-220ENST00000608988 CEBPBP17676 345 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 DCTDP32321 178 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 KIAA1024LP59773 190 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 ZNF684Q5T5D7 378 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 KRT77Q7Z794 578 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 DND1Q8IYX4 353 aaKnown RBP20.5■□□□□ 0.87
SHANK2-220ENST00000608988 HOXB13Q92826 284 aaPredicted RBP20.5■□□□□ 0.87
SHANK2-220ENST00000608988 LRRC3BQ96PB8 259 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 TTTY10Q9BZA0 68 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 ARL6Q9H0F7 186 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 SLC25A18Q9H1K4 315 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 TCF7L1Q9HCS4 588 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 TBX21Q9UL17 535 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 NOTCH4Q99466 2003 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 H7C417 338 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 XRCC3O43542 346 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 RBBP9O75884 186 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 SIM1P81133 766 aaPredicted RBP20.5■□□□□ 0.87
SHANK2-220ENST00000608988 MAT1AQ00266 395 aaKnown RBP20.5■□□□□ 0.87
SHANK2-220ENST00000608988 PLAURQ03405 335 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 SSBP1Q04837 148 aaKnown RBP20.5■□□□□ 0.87
SHANK2-220ENST00000608988 MESP2Q0VG99 397 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 RUNX2Q13950 521 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 Q499Y3 187 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 SFRP5Q5T4F7 317 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 SLC39A5Q6ZMH5 540 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 OR2AK2Q8NG84 335 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 OR6N1Q8NGY5 312 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 HSPA12BQ96MM6 686 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 MKKSQ9NPJ1 570 aaPredicted RBP20.5■□□□□ 0.87
SHANK2-220ENST00000608988 MTFP1Q9UDX5 166 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 COPS3Q9UNS2 423 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 IER3IP1Q9Y5U9 82 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 SPACA6W5XKT8 324 aa20.5■□□□□ 0.87
SHANK2-220ENST00000608988 ACOD1A6NK06 481 aa20.49■□□□□ 0.87
SHANK2-220ENST00000608988 MAGEB4O15481 346 aaPredicted RBP20.49■□□□□ 0.87
SHANK2-220ENST00000608988 ARPC5O15511 151 aa20.49■□□□□ 0.87
SHANK2-220ENST00000608988 VSIG10L2P0DP72 767 aa20.49■□□□□ 0.87
SHANK2-220ENST00000608988 POU3F2P20265 443 aaPredicted RBP20.49■□□□□ 0.87
SHANK2-220ENST00000608988 PSMB10P40306 273 aa20.49■□□□□ 0.87
SHANK2-220ENST00000608988 GPR143P51810 404 aa20.49■□□□□ 0.87
SHANK2-220ENST00000608988 GAB4Q2WGN9 574 aa20.49■□□□□ 0.87
SHANK2-220ENST00000608988 ALKAL2Q6UX46 152 aa20.49■□□□□ 0.87
SHANK2-220ENST00000608988 STAC2Q6ZMT1 411 aa20.49■□□□□ 0.87
SHANK2-220ENST00000608988 ZNF550Q7Z398 422 aa20.49■□□□□ 0.87
SHANK2-220ENST00000608988 MRPL43Q8N983 215 aaKnown RBP20.49■□□□□ 0.87
SHANK2-220ENST00000608988 NPEPL1Q8NDH3 523 aa20.49■□□□□ 0.87
SHANK2-220ENST00000608988 OR1S1Q8NH92 325 aa20.49■□□□□ 0.87
SHANK2-220ENST00000608988 GCDHQ92947 438 aaPredicted RBP20.49■□□□□ 0.87
SHANK2-220ENST00000608988 SLC22A18Q96BI1 424 aa20.49■□□□□ 0.87
SHANK2-220ENST00000608988 SMAD5Q99717 465 aaKnown RBP20.49■□□□□ 0.87
SHANK2-220ENST00000608988 OR52A4PA6NMU1 304 aa20.48■□□□□ 0.87
SHANK2-220ENST00000608988 ANXA2P2A6NMY6 339 aa20.48■□□□□ 0.87
SHANK2-220ENST00000608988 PYCARD-AS1I3L0S3 204 aa20.48■□□□□ 0.87
SHANK2-220ENST00000608988 SDC3O75056 442 aa20.48■□□□□ 0.87
SHANK2-220ENST00000608988 GLCEO94923 617 aa20.48■□□□□ 0.87
SHANK2-220ENST00000608988 SPI1P17947 270 aa20.48■□□□□ 0.87
SHANK2-220ENST00000608988 SDHBP21912 280 aa20.48■□□□□ 0.87
SHANK2-220ENST00000608988 CFPP27918 469 aa20.48■□□□□ 0.87
SHANK2-220ENST00000608988 DRD3P35462 400 aa20.48■□□□□ 0.87
SHANK2-220ENST00000608988 ACAA2P42765 397 aaKnown RBP20.48■□□□□ 0.87
SHANK2-220ENST00000608988 MAZP56270 477 aaKnown RBP20.48■□□□□ 0.87
SHANK2-220ENST00000608988 ALG10BQ5I7T1 473 aa20.48■□□□□ 0.87
SHANK2-220ENST00000608988 ULK3Q6PHR2 472 aa20.48■□□□□ 0.87
SHANK2-220ENST00000608988 SERPINA12Q8IW75 414 aa20.48■□□□□ 0.87
SHANK2-220ENST00000608988 OR5T2Q8NGG2 359 aa20.48■□□□□ 0.87
SHANK2-220ENST00000608988 RGP1Q92546 391 aaPredicted RBP20.48■□□□□ 0.87
SHANK2-220ENST00000608988 THRSPQ92748 146 aa20.48■□□□□ 0.87
SHANK2-220ENST00000608988 GINS4Q9BRT9 223 aa20.48■□□□□ 0.87
SHANK2-220ENST00000608988 IFT46Q9NQC8 304 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms