RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 HOXB6P17509 224 aaKnown RBP12.69□□□□□ -0.38
CTSA-219ENST00000607841 KLK2P20151 261 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 GRPRP30550 384 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 PEX19P40855 299 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 SMIM11AP58511 58 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 VLDLRP98155 873 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 FOXD4Q12950 439 aaPredicted RBP12.69□□□□□ -0.38
CTSA-219ENST00000607841 SLC17A1Q14916 467 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 H1FNTQ75WM6 255 aaPredicted RBP12.69□□□□□ -0.38
CTSA-219ENST00000607841 RRM2BQ7LG56 351 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 GPAT4Q86UL3 456 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 AQP12AQ8IXF9 295 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 RNF113BQ8IZP6 322 aaKnown RBP12.69□□□□□ -0.38
CTSA-219ENST00000607841 ADPRHL1Q8NDY3 354 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 PIK3C3Q8NEB9 887 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 TMEM255BQ8WV15 326 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 RNASE6Q93091 150 aaKnown RBP12.69□□□□□ -0.38
CTSA-219ENST00000607841 ZNF347Q96SE7 839 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 PIP5K1AQ99755 562 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 RBM24Q9BX46 236 aaKnown RBP12.69□□□□□ -0.38
CTSA-219ENST00000607841 LRMDAQ9H2I8 198 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 MAGIXQ9H6Y5 334 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 NMNAT1Q9HAN9 279 aaPredicted RBP12.69□□□□□ -0.38
CTSA-219ENST00000607841 NANSQ9NR45 359 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 PARPBPQ9NWS1 579 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 RHCGQ9UBD6 479 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 ING1Q9UK53 422 aaPredicted RBP12.69□□□□□ -0.38
CTSA-219ENST00000607841 NOSIPQ9Y314 301 aaKnown RBP12.69□□□□□ -0.38
CTSA-219ENST00000607841 FLNCQ14315 2725 aa12.69□□□□□ -0.38
CTSA-219ENST00000607841 A0A1W2PRQ8 180 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 TCRBV5S2A0A599 114 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 ZNF814B7Z6K7 855 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 M0R082 166 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 FFAR1O14842 300 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 PRSS23O95084 383 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 OR6A2O95222 327 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 CH25HO95992 272 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 BGLAPP02818 100 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 HIST1H2ABP04908 130 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 H1F0P07305 194 aaKnown RBP12.68□□□□□ -0.38
CTSA-219ENST00000607841 NQO1P15559 274 aaKnown RBP12.68□□□□□ -0.38
CTSA-219ENST00000607841 PTNP21246 168 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 CBLP22681 906 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 UQCRC1P31930 480 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 CHRNB3Q05901 458 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 TFF3Q07654 80 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 PMS2P3Q13401 168 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 DGCR6Q14129 220 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 FLOT2Q14254 428 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 ZNF74Q16587 644 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 FAM98BQ52LJ0 330 aaKnown RBP12.68□□□□□ -0.38
CTSA-219ENST00000607841 BEND4Q6ZU67 534 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 HIST3H2AQ7L7L0 130 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 KIF18BQ86Y91 864 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 CDK20Q8IZL9 346 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 ZNF610Q8N9Z0 462 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 ZNF417Q8TAU3 575 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 ACOT11Q8WXI4 607 aaPredicted RBP12.68□□□□□ -0.38
CTSA-219ENST00000607841 HIST1H2ACQ93077 130 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 ZNF587Q96SQ5 575 aaPredicted RBP12.68□□□□□ -0.38
CTSA-219ENST00000607841 SEPHS2Q99611 448 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 C12orf49Q9H741 205 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 FKRPQ9H9S5 495 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 SLC24A3Q9HC58 644 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 MRPL39Q9NYK5 338 aaKnown RBP12.68□□□□□ -0.38
CTSA-219ENST00000607841 ELOVL5Q9NYP7 299 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 ZNF229Q9UJW7 825 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 POMPQ9Y244 141 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 MAST4O15021 2626 aa12.68□□□□□ -0.38
CTSA-219ENST00000607841 NAV2Q8IVL1 2488 aa12.67□□□□□ -0.38
CTSA-219ENST00000607841 NCOA6Q14686 2063 aaPredicted RBP12.67□□□□□ -0.38
CTSA-219ENST00000607841 LOC102725191A0A1B0GVB3 256 aa12.67□□□□□ -0.38
CTSA-219ENST00000607841 ENO4A6NNW6 628 aa12.67□□□□□ -0.38
CTSA-219ENST00000607841 RAMP1O60894 148 aa12.67□□□□□ -0.38
CTSA-219ENST00000607841 MRPL33O75394 65 aaKnown RBP12.67□□□□□ -0.38
CTSA-219ENST00000607841 UMPSP11172 480 aa12.67□□□□□ -0.38
CTSA-219ENST00000607841 ZNF43P17038 809 aa12.67□□□□□ -0.38
CTSA-219ENST00000607841 PCYT1AP49585 367 aa12.67□□□□□ -0.38
CTSA-219ENST00000607841 P2RY4P51582 365 aa12.67□□□□□ -0.38
CTSA-219ENST00000607841 UGT2B15P54855 530 aa12.67□□□□□ -0.38
CTSA-219ENST00000607841 IL1RL1Q01638 556 aa12.67□□□□□ -0.38
CTSA-219ENST00000607841 LTBQ06643 244 aa12.67□□□□□ -0.38
CTSA-219ENST00000607841 C1DQ13901 141 aaKnown RBP12.67□□□□□ -0.38
CTSA-219ENST00000607841 POU4F3Q15319 338 aa12.67□□□□□ -0.38
CTSA-219ENST00000607841 SP5Q6BEB4 398 aaPredicted RBP12.67□□□□□ -0.38
CTSA-219ENST00000607841 ZNF730Q6ZMV8 503 aa12.67□□□□□ -0.38
CTSA-219ENST00000607841 PIWIL3Q7Z3Z3 882 aaKnown RBP12.67□□□□□ -0.38
CTSA-219ENST00000607841 NUFIP2Q7Z417 695 aaKnown RBP12.67□□□□□ -0.38
CTSA-219ENST00000607841 TSEN54Q7Z6J9 526 aaKnown RBP12.67□□□□□ -0.38
CTSA-219ENST00000607841 ZDHHC21Q8IVQ6 265 aa12.67□□□□□ -0.38
CTSA-219ENST00000607841 ZNF100Q8IYN0 542 aa12.67□□□□□ -0.38
CTSA-219ENST00000607841 OR9K2Q8NGE7 335 aa12.67□□□□□ -0.38
CTSA-219ENST00000607841 OR5J2Q8NH18 312 aa12.67□□□□□ -0.38
CTSA-219ENST00000607841 ZNF775Q96BV0 537 aaPredicted RBP12.67□□□□□ -0.38
CTSA-219ENST00000607841 SGTBQ96EQ0 304 aa12.67□□□□□ -0.38
CTSA-219ENST00000607841 OXGR1Q96P68 337 aa12.67□□□□□ -0.38
CTSA-219ENST00000607841 MOGAT1Q96PD6 335 aa12.67□□□□□ -0.38
CTSA-219ENST00000607841 OPN3Q9H1Y3 402 aaPredicted RBP12.67□□□□□ -0.38
CTSA-219ENST00000607841 KRCC1Q9NPI7 259 aaPredicted RBP12.67□□□□□ -0.38
CTSA-219ENST00000607841 MEPEQ9NQ76 525 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms