RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 KTI12Q96EK9 354 aaPredicted RBP16.99■□□□□ 0.31
SRSF4-206ENST00000605204 ZC3HAV1LQ96H79 300 aaKnown RBP16.99■□□□□ 0.31
SRSF4-206ENST00000605204 PLEKHF2Q9H8W4 249 aa16.99■□□□□ 0.31
SRSF4-206ENST00000605204 C6orf203Q9P0P8 240 aaPredicted RBP16.99■□□□□ 0.31
SRSF4-206ENST00000605204 PRSS50Q9UI38 385 aa16.99■□□□□ 0.31
SRSF4-206ENST00000605204 AKAP6Q13023 2319 aa16.98■□□□□ 0.31
SRSF4-206ENST00000605204 TRAPPC13A5PLN9 417 aa16.98■□□□□ 0.31
SRSF4-206ENST00000605204 THBDP07204 575 aa16.98■□□□□ 0.31
SRSF4-206ENST00000605204 GGT1P19440 569 aa16.98■□□□□ 0.31
SRSF4-206ENST00000605204 DNASE1P24855 282 aa16.98■□□□□ 0.31
SRSF4-206ENST00000605204 RPS5P46782 204 aaKnown RBP16.98■□□□□ 0.31
SRSF4-206ENST00000605204 P2RY4P51582 365 aa16.98■□□□□ 0.31
SRSF4-206ENST00000605204 CDH12P55289 794 aa16.98■□□□□ 0.31
SRSF4-206ENST00000605204 TGFBR3Q03167 851 aa16.98■□□□□ 0.31
SRSF4-206ENST00000605204 TIMM23BQ5SRD1 257 aa16.98■□□□□ 0.31
SRSF4-206ENST00000605204 OR7E24Q6IFN5 339 aa16.98■□□□□ 0.31
SRSF4-206ENST00000605204 GPAT4Q86UL3 456 aa16.98■□□□□ 0.31
SRSF4-206ENST00000605204 MICU2Q8IYU8 434 aa16.98■□□□□ 0.31
SRSF4-206ENST00000605204 SCAIQ8N9R8 606 aa16.98■□□□□ 0.31
SRSF4-206ENST00000605204 C1orf162Q8NEQ5 155 aaPredicted RBP16.98■□□□□ 0.31
SRSF4-206ENST00000605204 RNF217Q8TC41 542 aa16.98■□□□□ 0.31
SRSF4-206ENST00000605204 LZICQ8WZA0 190 aa16.98■□□□□ 0.31
SRSF4-206ENST00000605204 PIK3IP1Q96FE7 263 aa16.98■□□□□ 0.31
SRSF4-206ENST00000605204 SLC19A3Q9BZV2 496 aa16.98■□□□□ 0.31
SRSF4-206ENST00000605204 RCE1Q9Y256 329 aa16.98■□□□□ 0.31
SRSF4-206ENST00000605204 IGKV1D-42A0A075B6H8 117 aa16.97■□□□□ 0.31
SRSF4-206ENST00000605204 LOC102725191A0A1B0GVB3 256 aa16.97■□□□□ 0.31
SRSF4-206ENST00000605204 AKAP8O43823 692 aaKnown RBP16.97■□□□□ 0.31
SRSF4-206ENST00000605204 TPST2O60704 377 aa16.97■□□□□ 0.31
SRSF4-206ENST00000605204 MT-ATP6P00846 226 aa16.97■□□□□ 0.31
SRSF4-206ENST00000605204 RAF1P04049 648 aa16.97■□□□□ 0.31
SRSF4-206ENST00000605204 KDELR2P33947 212 aa16.97■□□□□ 0.31
SRSF4-206ENST00000605204 NUDT2P50583 147 aa16.97■□□□□ 0.31
SRSF4-206ENST00000605204 CRYBA2P53672 197 aa16.97■□□□□ 0.31
SRSF4-206ENST00000605204 ENTPD8Q5MY95 495 aa16.97■□□□□ 0.31
SRSF4-206ENST00000605204 C8orf82Q6P1X6 216 aaPredicted RBP16.97■□□□□ 0.31
SRSF4-206ENST00000605204 AAED1Q7RTV5 226 aa16.97■□□□□ 0.31
SRSF4-206ENST00000605204 C17orf78Q8N4C9 275 aa16.97■□□□□ 0.31
SRSF4-206ENST00000605204 ADAMTS16Q8TE57 1224 aa16.97■□□□□ 0.31
SRSF4-206ENST00000605204 SLC25A36Q96CQ1 311 aa16.97■□□□□ 0.31
SRSF4-206ENST00000605204 MBD6Q96DN6 1003 aa16.97■□□□□ 0.31
SRSF4-206ENST00000605204 MUCL1Q96DR8 90 aa16.97■□□□□ 0.31
SRSF4-206ENST00000605204 ASPNQ9BXN1 380 aa16.97■□□□□ 0.31
SRSF4-206ENST00000605204 UPB1Q9UBR1 384 aa16.97■□□□□ 0.31
SRSF4-206ENST00000605204 ARL2BPQ9Y2Y0 163 aa16.97■□□□□ 0.31
SRSF4-206ENST00000605204 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.96■□□□□ 0.31
SRSF4-206ENST00000605204 DCTN3O75935 186 aa16.96■□□□□ 0.31
SRSF4-206ENST00000605204 LYZL6O75951 148 aa16.96■□□□□ 0.31
SRSF4-206ENST00000605204 IGHV1-2P23083 117 aa16.96■□□□□ 0.31
SRSF4-206ENST00000605204 SLC7A2P52569 658 aa16.96■□□□□ 0.31
SRSF4-206ENST00000605204 CREB3L2Q70SY1 520 aa16.96■□□□□ 0.31
SRSF4-206ENST00000605204 H1FNTQ75WM6 255 aaPredicted RBP16.96■□□□□ 0.31
SRSF4-206ENST00000605204 TREML1Q86YW5 311 aa16.96■□□□□ 0.31
SRSF4-206ENST00000605204 SLC15A3Q8IY34 581 aa16.96■□□□□ 0.31
SRSF4-206ENST00000605204 ZNF433Q8N7K0 673 aaPredicted RBP16.96■□□□□ 0.31
SRSF4-206ENST00000605204 VANGL1Q8TAA9 524 aaPredicted RBP16.96■□□□□ 0.31
SRSF4-206ENST00000605204 TAAR8Q969N4 342 aa16.96■□□□□ 0.31
SRSF4-206ENST00000605204 FOXC2Q99958 501 aa16.96■□□□□ 0.31
SRSF4-206ENST00000605204 SLCO5A1Q9H2Y9 848 aa16.96■□□□□ 0.31
SRSF4-206ENST00000605204 ALG2Q9H553 416 aa16.96■□□□□ 0.31
SRSF4-206ENST00000605204 ESRP2Q9H6T0 727 aaKnown RBP16.96■□□□□ 0.31
SRSF4-206ENST00000605204 CMTM6Q9NX76 183 aa16.96■□□□□ 0.31
SRSF4-206ENST00000605204 SH3GLB1Q9Y371 365 aa16.96■□□□□ 0.31
SRSF4-206ENST00000605204 PRRC2AP48634 2157 aaKnown RBP16.96■□□□□ 0.31
SRSF4-206ENST00000605204 VPS13CQ709C8 3753 aa16.95■□□□□ 0.3
SRSF4-206ENST00000605204 CIB4A0PJX0 185 aa16.95■□□□□ 0.3
SRSF4-206ENST00000605204 OR5H1A6NKK0 313 aa16.95■□□□□ 0.3
SRSF4-206ENST00000605204 CCT8L1PA6NM43 557 aa16.95■□□□□ 0.3
SRSF4-206ENST00000605204 SIAH2O43255 324 aa16.95■□□□□ 0.3
SRSF4-206ENST00000605204 KLF4O43474 513 aa16.95■□□□□ 0.3
SRSF4-206ENST00000605204 THRBP10828 461 aa16.95■□□□□ 0.3
SRSF4-206ENST00000605204 ZNF43P17038 809 aa16.95■□□□□ 0.3
SRSF4-206ENST00000605204 IFNA8P32881 189 aa16.95■□□□□ 0.3
SRSF4-206ENST00000605204 ART1P52961 327 aa16.95■□□□□ 0.3
SRSF4-206ENST00000605204 LIPEQ05469 1076 aa16.95■□□□□ 0.3
SRSF4-206ENST00000605204 KEAP1Q14145 624 aa16.95■□□□□ 0.3
SRSF4-206ENST00000605204 TAB1Q15750 504 aa16.95■□□□□ 0.3
SRSF4-206ENST00000605204 NPTX1Q15818 432 aa16.95■□□□□ 0.3
SRSF4-206ENST00000605204 LRRC23Q53EV4 343 aaPredicted RBP16.95■□□□□ 0.3
SRSF4-206ENST00000605204 LINC00114Q6XXX2 140 aa16.95■□□□□ 0.3
SRSF4-206ENST00000605204 C20orf204Q6ZNR8 217 aa16.95■□□□□ 0.3
SRSF4-206ENST00000605204 CARM1Q86X55 608 aa16.95■□□□□ 0.3
SRSF4-206ENST00000605204 WFDC8Q8IUA0 241 aa16.95■□□□□ 0.3
SRSF4-206ENST00000605204 ZIC4Q8N9L1 334 aa16.95■□□□□ 0.3
SRSF4-206ENST00000605204 SLC41A3Q96GZ6 507 aa16.95■□□□□ 0.3
SRSF4-206ENST00000605204 OXGR1Q96P68 337 aa16.95■□□□□ 0.3
SRSF4-206ENST00000605204 LRRC37BQ96QE4 947 aa16.95■□□□□ 0.3
SRSF4-206ENST00000605204 WFDC6Q9BQY6 131 aa16.95■□□□□ 0.3
SRSF4-206ENST00000605204 PRR14Q9BWN1 585 aa16.95■□□□□ 0.3
SRSF4-206ENST00000605204 SPAG4Q9NPE6 437 aa16.95■□□□□ 0.3
SRSF4-206ENST00000605204 CPSF4LA6NMK7 179 aaKnown RBP16.94■□□□□ 0.3
SRSF4-206ENST00000605204 M0R082 166 aa16.94■□□□□ 0.3
SRSF4-206ENST00000605204 PDLIM1O00151 329 aa16.94■□□□□ 0.3
SRSF4-206ENST00000605204 PAX7P23759 505 aa16.94■□□□□ 0.3
SRSF4-206ENST00000605204 EDNRAP25101 427 aa16.94■□□□□ 0.3
SRSF4-206ENST00000605204 MPGP29372 298 aa16.94■□□□□ 0.3
SRSF4-206ENST00000605204 GRPRP30550 384 aa16.94■□□□□ 0.3
SRSF4-206ENST00000605204 NTF4P34130 210 aa16.94■□□□□ 0.3
SRSF4-206ENST00000605204 FAPQ12884 760 aa16.94■□□□□ 0.3
SRSF4-206ENST00000605204 CYBRD1Q53TN4 286 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms