RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 RAB6AP20340 208 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 PSMB5P28074 263 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 CD200P41217 278 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 EFNA5P52803 228 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 PLK1P53350 603 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 CEBPGP53567 150 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 EEFSECP57772 596 aaKnown RBP4.35□□□□□ -1.71
LINC01109-201ENST00000603837 RAP1AP62834 184 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 RPS15P62841 145 aaKnown RBP4.35□□□□□ -1.71
LINC01109-201ENST00000603837 BLOC1S1P78537 153 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 ENPP2Q13822 863 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 SLBPQ14493 270 aaKnown RBP eCLIP4.35□□□□□ -1.71
LINC01109-201ENST00000603837 PGM5Q15124 567 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 SCGB2B2Q4G0G5 96 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 C14orf28Q4W4Y0 310 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 RABL3Q5HYI8 236 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 EOGTQ5NDL2 527 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 DNLZQ5SXM8 178 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 C9orf64Q5T6V5 341 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 VWA1Q6PCB0 445 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 ZNF367Q7RTV3 350 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 OR11L1Q8NGX0 322 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 NFKBIDQ8NI38 313 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 DNAJB14Q8TBM8 379 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 ERGIC1Q969X5 290 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 TGM7Q96PF1 710 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 FANCD2OSQ96PS1 177 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 CCDC3Q9BQI4 270 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 MRI1Q9BV20 369 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 SPRTNQ9H040 489 aaPredicted RBP4.35□□□□□ -1.71
LINC01109-201ENST00000603837 SLC25A32Q9H2D1 315 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 SLC38A1Q9H2H9 487 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 ATXN3LQ9H3M9 355 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 DHX35Q9H5Z1 703 aaKnown RBP4.35□□□□□ -1.71
LINC01109-201ENST00000603837 NSUN3Q9H649 340 aaKnown RBP4.35□□□□□ -1.71
LINC01109-201ENST00000603837 METTL17Q9H7H0 456 aaPredicted RBP4.35□□□□□ -1.71
LINC01109-201ENST00000603837 METTL8Q9H825 291 aaKnown RBP4.35□□□□□ -1.71
LINC01109-201ENST00000603837 UBTD1Q9HAC8 227 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 CACYBPQ9HB71 228 aaKnown RBP4.35□□□□□ -1.71
LINC01109-201ENST00000603837 FSCN3Q9NQT6 498 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 C2orf42Q9NWW7 574 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 STOX2Q9P2F5 926 aaPredicted RBP4.35□□□□□ -1.71
LINC01109-201ENST00000603837 MAGEL2Q9UJ55 1249 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 CBLCQ9ULV8 474 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 PKP3Q9Y446 797 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 TSSC4Q9Y5U2 329 aaPredicted RBP4.35□□□□□ -1.71
LINC01109-201ENST00000603837 WDR27A2RRH5 827 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 MCIDASD6RGH6 385 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 G3V3Q6 166 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 SGK494L7N484 410 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 RFXAPO00287 272 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 BCAT2O15382 392 aaPredicted RBP4.35□□□□□ -1.71
LINC01109-201ENST00000603837 CHST10O43529 356 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 B3GAT3O94766 335 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 RCC1P18754 421 aaPredicted RBP4.35□□□□□ -1.71
LINC01109-201ENST00000603837 HTR1EP28566 365 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 DCTP40126 519 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 ATP4BP51164 291 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 TMEM33P57088 247 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 CD81P60033 236 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 CDC42EP1Q00587 391 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 MXD1Q05195 221 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 MTAPQ13126 283 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 UBXN2BQ14CS0 331 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 INPP5JQ15735 1006 aaPredicted RBP4.35□□□□□ -1.71
LINC01109-201ENST00000603837 CDKN3Q16667 212 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 NDUFA9Q16795 377 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 ANKRD55Q3KP44 614 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 PLEKHS1Q5SXH7 462 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 PRAMEF7Q5VXH5 474 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 SLC35D2Q76EJ3 337 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 LINGO2Q7L985 606 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 ADCK2Q7Z695 626 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 LRRC28Q86X40 367 aaPredicted RBP4.35□□□□□ -1.71
LINC01109-201ENST00000603837 GID4Q8IVV7 300 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 C15orf54Q8N8G6 183 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 GPRC5AQ8NFJ5 357 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 OR5D13Q8NGL4 314 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 OR5M8Q8NGP6 311 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 NPRL2Q8WTW4 380 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 RAB40AQ8WXH6 277 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 ACOT12Q8WYK0 555 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 DNASE1L2Q92874 299 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 C14orf79Q96F83 325 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 C1orf159Q96HA4 380 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 TMEM209Q96SK2 561 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 GINS4Q9BRT9 223 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 MED10Q9BTT4 135 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 FICDQ9BVA6 458 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 NUDT9Q9BW91 350 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 EPHX3Q9H6B9 360 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 PTGES2Q9H7Z7 377 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 B3GAT2Q9NPZ5 323 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 MBNL1Q9NR56 388 aaKnown RBP4.35□□□□□ -1.71
LINC01109-201ENST00000603837 GAR1Q9NY12 217 aaKnown RBP4.35□□□□□ -1.71
LINC01109-201ENST00000603837 SEMA5BQ9P283 1151 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 IKZF3Q9UKT9 509 aa4.35□□□□□ -1.71
LINC01109-201ENST00000603837 ZNF214Q9UL59 606 aaPredicted RBP4.35□□□□□ -1.71
LINC01109-201ENST00000603837 EXO1Q9UQ84 846 aaKnown RBP4.35□□□□□ -1.71
LINC01109-201ENST00000603837 MRPS33Q9Y291 106 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms