RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 LAX1Q8IWV1 398 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 FAM71AQ8IYT1 594 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 STK40Q8N2I9 435 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 FGFRL1Q8N441 504 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 ZCCHC9Q8N567 271 aaKnown RBP4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 C2orf73Q8N5S3 287 aaPredicted RBP4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 TMEM156Q8N614 296 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 SAP25Q8TEE9 199 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 EMG1Q92979 244 aaKnown RBP4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 OR5B2Q96R09 309 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 CPXM1Q96SM3 734 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 UTP23Q9BRU9 249 aaKnown RBP4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 ZNF2Q9BSG1 426 aaPredicted RBP4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 LMF2Q9BU23 707 aaKnown RBP4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 GPR174Q9BXC1 333 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 MRPL18Q9H0U6 180 aaKnown RBP4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 MYNNQ9NPC7 610 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 SIX2Q9NPC8 291 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 DHCR7Q9UBM7 475 aaKnown RBP4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 CDC42EP3Q9UKI2 254 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 NXT1Q9UKK6 140 aaKnown RBP4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 LAMB2P55268 1798 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 TBC1D3DA0A087WVF3 549 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 TBC1D3IA0A087WXS9 549 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 TBC1D3EA0A087X179 549 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 MBLAC1A4D2B0 266 aaPredicted RBP4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 TBC1D3BA6NDS4 549 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 TBC1D3FA6NER0 549 aaPredicted RBP4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 TBC1D3LB9A6J9 549 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 H3BN98 237 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 NFIBO00712 420 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 RFXANKO14593 260 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 SNAPC5O75971 98 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 LATS1O95835 1130 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 PPBPP02775 128 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 HEXAP06865 529 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 TBC1D3HP0C7X1 549 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 DAOP14920 347 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 ZNF25P17030 456 aaPredicted RBP4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 C4BPBP20851 252 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 ACKR3P25106 362 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 ADORA2AP29274 412 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 ERVS71-1P61550 626 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 RAP1AP62834 184 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 BLOC1S1P78537 153 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 ADARB1P78563 741 aaKnown RBP4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 LCN2P80188 198 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 SP3Q02447 781 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 MAD2L1Q13257 205 aaPredicted RBP4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 PTGR1Q14914 329 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 CYBRD1Q53TN4 286 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 FAM74A1Q5RGS3 127 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 C9orf64Q5T6V5 341 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 EEF1DP3Q658K8 133 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 TBC1D3GQ6DHY5 549 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 TBC1D3CQ6IPX1 549 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 LPCAT3Q6P1A2 487 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 GJB7Q6PEY0 223 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 CBLN3Q6UW01 205 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 BAIAP2L2Q6UXY1 529 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 CHMP1BQ7LBR1 199 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 SLC16A14Q7RTX9 510 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 TMEM173Q86WV6 379 aaPredicted RBP4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 GLB1L2Q8IW92 636 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 TBC1D3Q8IZP1 549 aaPredicted RBP4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 BLIDQ8IZY5 108 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 CBR4Q8N4T8 237 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 OR10S1Q8NGN2 331 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 OR9G4Q8NGQ1 327 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 OR2T4Q8NH00 348 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 PROKR1Q8TCW9 393 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 MZB1Q8WU39 189 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 CELF6Q96J87 481 aaKnown RBP4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 MUS81Q96NY9 551 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 DGCR6LQ9BY27 220 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 DUSP16Q9BY84 665 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 NSUN3Q9H649 340 aaKnown RBP4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 PPP1R3EQ9H7J1 279 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 C1GALT1Q9NS00 363 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 ANKRD10Q9NXR5 420 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 GPR83Q9NYM4 423 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 NLKQ9UBE8 527 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 CCNL1Q9UK58 526 aaPredicted RBP4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 FBXL2Q9UKC9 423 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 B9D1Q9UPM9 204 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 GSTK1Q9Y2Q3 226 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 LRP12Q9Y561 859 aa4.59□□□□□ -1.67
SPTBN1-206ENST00000602898 RGPD2P0DJD1 1756 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 A0A1W2PP18 115 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 FITM1A5D6W6 292 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 LCMT2O60294 686 aaKnown RBP4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 RPN2P04844 631 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 CRYBA1P05813 215 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 MYOGP15173 224 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 HIST1H1BP16401 226 aaKnown RBP4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 MPZP25189 248 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 KDELR2P33947 212 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 RPL14P50914 215 aaKnown RBP4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 CCL11P51671 97 aa4.59□□□□□ -1.68
SPTBN1-206ENST00000602898 FOXL2P58012 376 aa4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms