RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 ANKRD46Q86W74 232 aa14.48□□□□□ -0.09
USE1-208ENST00000600970 OR8J2Q8NGG1 315 aa14.48□□□□□ -0.09
USE1-208ENST00000600970 ZNF418Q8TF45 676 aaPredicted RBP14.48□□□□□ -0.09
USE1-208ENST00000600970 GCDHQ92947 438 aaPredicted RBP14.48□□□□□ -0.09
USE1-208ENST00000600970 SLC38A1Q9H2H9 487 aa14.48□□□□□ -0.09
USE1-208ENST00000600970 TPK1Q9H3S4 243 aa14.48□□□□□ -0.09
USE1-208ENST00000600970 MOV10Q9HCE1 1003 aaKnown RBP14.48□□□□□ -0.09
USE1-208ENST00000600970 ADPRHL2Q9NX46 363 aa14.48□□□□□ -0.09
USE1-208ENST00000600970 SPEF1Q9Y4P9 236 aa14.48□□□□□ -0.09
USE1-208ENST00000600970 IGHV2OR16-5A0A0B4J2B6 119 aa14.47□□□□□ -0.09
USE1-208ENST00000600970 AGAP5A6NIR3 686 aa14.47□□□□□ -0.09
USE1-208ENST00000600970 OR6C65A6NJZ3 312 aa14.47□□□□□ -0.09
USE1-208ENST00000600970 FAM157AC9JC47 383 aa14.47□□□□□ -0.09
USE1-208ENST00000600970 C1QCP02747 245 aa14.47□□□□□ -0.09
USE1-208ENST00000600970 CBR1P16152 277 aa14.47□□□□□ -0.09
USE1-208ENST00000600970 CXCR1P25024 350 aa14.47□□□□□ -0.09
USE1-208ENST00000600970 ROR2Q01974 943 aaKnown RBP14.47□□□□□ -0.09
USE1-208ENST00000600970 EMX2Q04743 252 aa14.47□□□□□ -0.09
USE1-208ENST00000600970 MAD2L1Q13257 205 aaPredicted RBP14.47□□□□□ -0.09
USE1-208ENST00000600970 SYPL1Q16563 259 aa14.47□□□□□ -0.09
USE1-208ENST00000600970 EPHX4Q8IUS5 362 aa14.47□□□□□ -0.09
USE1-208ENST00000600970 CLDND2Q8NHS1 167 aa14.47□□□□□ -0.09
USE1-208ENST00000600970 EPS8L3Q8TE67 593 aaKnown RBP14.47□□□□□ -0.09
USE1-208ENST00000600970 FAM216AQ8WUB2 273 aa14.47□□□□□ -0.09
USE1-208ENST00000600970 TMEM186Q96B77 213 aa14.47□□□□□ -0.09
USE1-208ENST00000600970 NEURL3Q96EH8 262 aa14.47□□□□□ -0.09
USE1-208ENST00000600970 LINC00470Q9BZP3 86 aa14.47□□□□□ -0.09
USE1-208ENST00000600970 HIF1ANQ9NWT6 349 aa14.47□□□□□ -0.09
USE1-208ENST00000600970 ASIC5Q9NY37 505 aa14.47□□□□□ -0.09
USE1-208ENST00000600970 NOP53Q9NZM5 478 aaKnown RBP14.47□□□□□ -0.09
USE1-208ENST00000600970 MARCOQ9UEW3 520 aaPredicted RBP14.47□□□□□ -0.09
USE1-208ENST00000600970 PRSS51A0A1B0GVH4 220 aa14.46□□□□□ -0.09
USE1-208ENST00000600970 CFAP73A6NFT4 308 aa14.46□□□□□ -0.09
USE1-208ENST00000600970 TMEM229AB2RXF0 380 aa14.46□□□□□ -0.09
USE1-208ENST00000600970 HMGN4O00479 90 aa14.46□□□□□ -0.09
USE1-208ENST00000600970 VAMP5O95183 116 aa14.46□□□□□ -0.09
USE1-208ENST00000600970 CHRM4P08173 479 aa14.46□□□□□ -0.09
USE1-208ENST00000600970 BNIP2Q12982 314 aa14.46□□□□□ -0.09
USE1-208ENST00000600970 SCGB2A2Q13296 93 aa14.46□□□□□ -0.09
USE1-208ENST00000600970 ELFN2Q5R3F8 820 aa14.46□□□□□ -0.09
USE1-208ENST00000600970 MRPL2Q5T653 305 aaKnown RBP14.46□□□□□ -0.09
USE1-208ENST00000600970 THSD4Q6ZMP0 1018 aa14.46□□□□□ -0.09
USE1-208ENST00000600970 PEG10Q86TG7 708 aaKnown RBP14.46□□□□□ -0.09
USE1-208ENST00000600970 CARM1Q86X55 608 aa14.46□□□□□ -0.09
USE1-208ENST00000600970 ANKFN1Q8N957 763 aa14.46□□□□□ -0.09
USE1-208ENST00000600970 TAPBPLQ9BX59 468 aa14.46□□□□□ -0.09
USE1-208ENST00000600970 LPAR2Q9HBW0 351 aa14.46□□□□□ -0.09
USE1-208ENST00000600970 PCDHB10Q9UN67 800 aa14.46□□□□□ -0.09
USE1-208ENST00000600970 GRIP1Q9Y3R0 1128 aa14.46□□□□□ -0.09
USE1-208ENST00000600970 ZNF503-AS2A6NEH8 195 aa14.45□□□□□ -0.1
USE1-208ENST00000600970 FRS3O43559 492 aa14.45□□□□□ -0.1
USE1-208ENST00000600970 MSMBP08118 114 aa14.45□□□□□ -0.1
USE1-208ENST00000600970 UQCRBP14927 111 aa14.45□□□□□ -0.1
USE1-208ENST00000600970 IL7RP16871 459 aa14.45□□□□□ -0.1
USE1-208ENST00000600970 RPS4Y1P22090 263 aaKnown RBP14.45□□□□□ -0.1
USE1-208ENST00000600970 CHI3L1P36222 383 aaPredicted RBP14.45□□□□□ -0.1
USE1-208ENST00000600970 GPR6P46095 362 aaPredicted RBP14.45□□□□□ -0.1
USE1-208ENST00000600970 SH3BGRP55822 239 aaPredicted RBP14.45□□□□□ -0.1
USE1-208ENST00000600970 HILS1P60008 231 aa14.45□□□□□ -0.1
USE1-208ENST00000600970 ARF1P84077 181 aaKnown RBP14.45□□□□□ -0.1
USE1-208ENST00000600970 POU3F1Q03052 451 aaPredicted RBP14.45□□□□□ -0.1
USE1-208ENST00000600970 NPRL3Q12980 569 aa14.45□□□□□ -0.1
USE1-208ENST00000600970 SNTB2Q13425 540 aaKnown RBP14.45□□□□□ -0.1
USE1-208ENST00000600970 DAG1Q14118 895 aa14.45□□□□□ -0.1
USE1-208ENST00000600970 GSTA3Q16772 222 aa14.45□□□□□ -0.1
USE1-208ENST00000600970 ANXA8L1Q5VT79 327 aa14.45□□□□□ -0.1
USE1-208ENST00000600970 PRAMEF8Q5VWM4 474 aa14.45□□□□□ -0.1
USE1-208ENST00000600970 PRAMEF7Q5VXH5 474 aa14.45□□□□□ -0.1
USE1-208ENST00000600970 KRT80Q6KB66 452 aa14.45□□□□□ -0.1
USE1-208ENST00000600970 SHQ1Q6PI26 577 aaKnown RBP14.45□□□□□ -0.1
USE1-208ENST00000600970 GSPT2Q8IYD1 628 aaKnown RBP14.45□□□□□ -0.1
USE1-208ENST00000600970 APOPT1Q96IL0 206 aa14.45□□□□□ -0.1
USE1-208ENST00000600970 TRNT1Q96Q11 434 aaKnown RBP14.45□□□□□ -0.1
USE1-208ENST00000600970 LRRC37BQ96QE4 947 aa14.45□□□□□ -0.1
USE1-208ENST00000600970 SLC35A5Q9BS91 424 aa14.45□□□□□ -0.1
USE1-208ENST00000600970 DPY30Q9C005 99 aa14.45□□□□□ -0.1
USE1-208ENST00000600970 RACGAP1Q9H0H5 632 aa14.45□□□□□ -0.1
USE1-208ENST00000600970 NARFLQ9H6Q4 476 aa14.45□□□□□ -0.1
USE1-208ENST00000600970 MKS1Q9NXB0 559 aa14.45□□□□□ -0.1
USE1-208ENST00000600970 SLC17A7Q9P2U7 560 aa14.45□□□□□ -0.1
USE1-208ENST00000600970 RASD1Q9Y272 281 aa14.45□□□□□ -0.1
USE1-208ENST00000600970 CMAHPQ9Y471 501 aa14.45□□□□□ -0.1
USE1-208ENST00000600970 MEGF8Q7Z7M0 2845 aa14.45□□□□□ -0.1
USE1-208ENST00000600970 A8MVM7 634 aa14.44□□□□□ -0.1
USE1-208ENST00000600970 RPL36A-HNRNPH2H7BZ11 118 aa14.44□□□□□ -0.1
USE1-208ENST00000600970 TRIM77I1YAP6 450 aa14.44□□□□□ -0.1
USE1-208ENST00000600970 GKN3PP0CG01 181 aa14.44□□□□□ -0.1
USE1-208ENST00000600970 COL8A2P25067 703 aa14.44□□□□□ -0.1
USE1-208ENST00000600970 ARR3P36575 388 aa14.44□□□□□ -0.1
USE1-208ENST00000600970 GNA13Q14344 377 aa14.44□□□□□ -0.1
USE1-208ENST00000600970 CASP8Q14790 479 aa14.44□□□□□ -0.1
USE1-208ENST00000600970 MSMPQ1L6U9 139 aa14.44□□□□□ -0.1
USE1-208ENST00000600970 SMU1Q2TAY7 513 aa14.44□□□□□ -0.1
USE1-208ENST00000600970 LRRC74BQ6ZQY2 392 aa14.44□□□□□ -0.1
USE1-208ENST00000600970 USP43Q70EL4 1123 aa14.44□□□□□ -0.1
USE1-208ENST00000600970 RBM4Q9BWF3 364 aaKnown RBP14.44□□□□□ -0.1
USE1-208ENST00000600970 MTHFD2LQ9H903 347 aaPredicted RBP14.44□□□□□ -0.1
USE1-208ENST00000600970 PPCSQ9HAB8 311 aa14.44□□□□□ -0.1
USE1-208ENST00000600970 NOX3Q9HBY0 568 aa14.44□□□□□ -0.1
USE1-208ENST00000600970 CRLF2Q9HC73 371 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms