RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 TPD52L3Q96J77 140 aa24.93■■□□□ 1.58
SSBP4-206ENST00000599699 ALG2Q9H553 416 aa24.93■■□□□ 1.58
SSBP4-206ENST00000599699 ITGB1BP2Q9UKP3 347 aa24.93■■□□□ 1.58
SSBP4-206ENST00000599699 CSMD1Q96PZ7 3565 aa24.93■■□□□ 1.58
SSBP4-206ENST00000599699 SPG11Q96JI7 2443 aa24.92■■□□□ 1.58
SSBP4-206ENST00000599699 TRAPPC13A5PLN9 417 aa24.92■■□□□ 1.58
SSBP4-206ENST00000599699 CHP2O43745 196 aa24.92■■□□□ 1.58
SSBP4-206ENST00000599699 THBDP07204 575 aa24.92■■□□□ 1.58
SSBP4-206ENST00000599699 P2RY4P51582 365 aa24.92■■□□□ 1.58
SSBP4-206ENST00000599699 IL1RL1Q01638 556 aa24.92■■□□□ 1.58
SSBP4-206ENST00000599699 AAED1Q7RTV5 226 aa24.92■■□□□ 1.58
SSBP4-206ENST00000599699 CCT8L2Q96SF2 557 aa24.92■■□□□ 1.58
SSBP4-206ENST00000599699 UPB1Q9UBR1 384 aa24.92■■□□□ 1.58
SSBP4-206ENST00000599699 SLC7A7Q9UM01 511 aa24.92■■□□□ 1.58
SSBP4-206ENST00000599699 FREM1Q5H8C1 2179 aa24.91■■□□□ 1.58
SSBP4-206ENST00000599699 DEFB108AA8MXU0 73 aa24.91■■□□□ 1.58
SSBP4-206ENST00000599699 M0R082 166 aa24.91■■□□□ 1.58
SSBP4-206ENST00000599699 GRPRP30550 384 aa24.91■■□□□ 1.58
SSBP4-206ENST00000599699 GSK3BP49841 420 aa24.91■■□□□ 1.58
SSBP4-206ENST00000599699 FAPQ12884 760 aa24.91■■□□□ 1.58
SSBP4-206ENST00000599699 DEF8Q6ZN54 512 aa24.91■■□□□ 1.58
SSBP4-206ENST00000599699 ZNF417Q8TAU3 575 aa24.91■■□□□ 1.58
SSBP4-206ENST00000599699 ZNF385AQ96PM9 386 aaKnown RBP24.91■■□□□ 1.58
SSBP4-206ENST00000599699 ZNF587Q96SQ5 575 aaPredicted RBP24.91■■□□□ 1.58
SSBP4-206ENST00000599699 KCTD14Q9BQ13 255 aaPredicted RBP24.91■■□□□ 1.58
SSBP4-206ENST00000599699 TMEM43Q9BTV4 400 aa24.91■■□□□ 1.58
SSBP4-206ENST00000599699 ASB6Q9NWX5 421 aa24.91■■□□□ 1.58
SSBP4-206ENST00000599699 SEC14L4Q9UDX3 406 aa24.91■■□□□ 1.58
SSBP4-206ENST00000599699 ANKRD17O75179 2603 aaKnown RBP24.9■■□□□ 1.58
SSBP4-206ENST00000599699 CXCR6O00574 342 aa24.9■■□□□ 1.58
SSBP4-206ENST00000599699 SHOX2O60902 331 aaPredicted RBP24.9■■□□□ 1.58
SSBP4-206ENST00000599699 IGHV1-2P23083 117 aa24.9■■□□□ 1.58
SSBP4-206ENST00000599699 OR1E2P47887 323 aa24.9■■□□□ 1.58
SSBP4-206ENST00000599699 MFSD13AQ14CX5 517 aa24.9■■□□□ 1.58
SSBP4-206ENST00000599699 STK11Q15831 433 aa24.9■■□□□ 1.58
SSBP4-206ENST00000599699 KDM8Q8N371 416 aa24.9■■□□□ 1.58
SSBP4-206ENST00000599699 ZIC4Q8N9L1 334 aa24.9■■□□□ 1.58
SSBP4-206ENST00000599699 LZICQ8WZA0 190 aa24.9■■□□□ 1.58
SSBP4-206ENST00000599699 TMEM45BQ96B21 275 aa24.9■■□□□ 1.58
SSBP4-206ENST00000599699 PCDHAC1Q9H158 963 aa24.9■■□□□ 1.58
SSBP4-206ENST00000599699 ADA2Q9NZK5 511 aa24.9■■□□□ 1.58
SSBP4-206ENST00000599699 CSMD2Q7Z408 3487 aa24.89■■□□□ 1.58
SSBP4-206ENST00000599699 SIAH2O43255 324 aa24.89■■□□□ 1.58
SSBP4-206ENST00000599699 NQO1P15559 274 aaKnown RBP24.89■■□□□ 1.58
SSBP4-206ENST00000599699 DNAJA1P31689 397 aaKnown RBP24.89■■□□□ 1.58
SSBP4-206ENST00000599699 TAS2R41P59536 307 aa24.89■■□□□ 1.58
SSBP4-206ENST00000599699 TTC33Q6PID6 262 aaPredicted RBP24.89■■□□□ 1.58
SSBP4-206ENST00000599699 CREB3L2Q70SY1 520 aa24.89■■□□□ 1.58
SSBP4-206ENST00000599699 H1FNTQ75WM6 255 aaPredicted RBP24.89■■□□□ 1.58
SSBP4-206ENST00000599699 OR6S1Q8NH40 331 aa24.89■■□□□ 1.58
SSBP4-206ENST00000599699 HSD17B8Q92506 261 aa24.89■■□□□ 1.58
SSBP4-206ENST00000599699 SLC41A3Q96GZ6 507 aa24.89■■□□□ 1.58
SSBP4-206ENST00000599699 USB1Q9BQ65 265 aaKnown RBP24.89■■□□□ 1.58
SSBP4-206ENST00000599699 ASPNQ9BXN1 380 aa24.89■■□□□ 1.58
SSBP4-206ENST00000599699 LIME1Q9H400 295 aa24.89■■□□□ 1.58
SSBP4-206ENST00000599699 SPAG4Q9NPE6 437 aa24.89■■□□□ 1.58
SSBP4-206ENST00000599699 EDARQ9UNE0 448 aa24.89■■□□□ 1.58
SSBP4-206ENST00000599699 B3GALT5Q9Y2C3 310 aa24.89■■□□□ 1.58
SSBP4-206ENST00000599699 ABCA4P78363 2273 aa24.89■■□□□ 1.57
SSBP4-206ENST00000599699 CIB4A0PJX0 185 aa24.88■■□□□ 1.57
SSBP4-206ENST00000599699 ZNF682O95780 498 aa24.88■■□□□ 1.57
SSBP4-206ENST00000599699 THY1P04216 161 aa24.88■■□□□ 1.57
SSBP4-206ENST00000599699 ZNF43P17038 809 aa24.88■■□□□ 1.57
SSBP4-206ENST00000599699 COX5AP20674 150 aa24.88■■□□□ 1.57
SSBP4-206ENST00000599699 SELENOWP63302 87 aa24.88■■□□□ 1.57
SSBP4-206ENST00000599699 C1DQ13901 141 aaKnown RBP24.88■■□□□ 1.57
SSBP4-206ENST00000599699 BEX5Q5H9J7 111 aa24.88■■□□□ 1.57
SSBP4-206ENST00000599699 GKAP1Q5VSY0 366 aaPredicted RBP24.88■■□□□ 1.57
SSBP4-206ENST00000599699 TSPYL5Q86VY4 417 aaPredicted RBP24.88■■□□□ 1.57
SSBP4-206ENST00000599699 ZNF433Q8N7K0 673 aaPredicted RBP24.88■■□□□ 1.57
SSBP4-206ENST00000599699 MALT1Q9UDY8 824 aa24.88■■□□□ 1.57
SSBP4-206ENST00000599699 TAGLN3Q9UI15 199 aa24.88■■□□□ 1.57
SSBP4-206ENST00000599699 CORINQ9Y5Q5 1042 aa24.88■■□□□ 1.57
SSBP4-206ENST00000599699 HRNRQ86YZ3 2850 aaPredicted RBP24.88■■□□□ 1.57
SSBP4-206ENST00000599699 MYO9AB2RTY4 2548 aa24.87■■□□□ 1.57
SSBP4-206ENST00000599699 KRT33AO76009 404 aa24.87■■□□□ 1.57
SSBP4-206ENST00000599699 BGLAPP02818 100 aa24.87■■□□□ 1.57
SSBP4-206ENST00000599699 GGT1P19440 569 aa24.87■■□□□ 1.57
SSBP4-206ENST00000599699 TAB1Q15750 504 aa24.87■■□□□ 1.57
SSBP4-206ENST00000599699 TSPO2Q5TGU0 170 aa24.87■■□□□ 1.57
SSBP4-206ENST00000599699 LINC00114Q6XXX2 140 aa24.87■■□□□ 1.57
SSBP4-206ENST00000599699 WDR88Q6ZMY6 472 aa24.87■■□□□ 1.57
SSBP4-206ENST00000599699 MPP4Q96JB8 637 aa24.87■■□□□ 1.57
SSBP4-206ENST00000599699 OXGR1Q96P68 337 aa24.87■■□□□ 1.57
SSBP4-206ENST00000599699 SLC7A10Q9NS82 523 aa24.87■■□□□ 1.57
SSBP4-206ENST00000599699 ARL8BQ9NVJ2 186 aa24.87■■□□□ 1.57
SSBP4-206ENST00000599699 ABCD2Q9UBJ2 740 aa24.87■■□□□ 1.57
SSBP4-206ENST00000599699 KPNA4O00629 521 aaPredicted RBP24.86■■□□□ 1.57
SSBP4-206ENST00000599699 RAD51DO75771 328 aa24.86■■□□□ 1.57
SSBP4-206ENST00000599699 LYPD3O95274 346 aa24.86■■□□□ 1.57
SSBP4-206ENST00000599699 FOXD4Q12950 439 aaPredicted RBP24.86■■□□□ 1.57
SSBP4-206ENST00000599699 PMS2P3Q13401 168 aa24.86■■□□□ 1.57
SSBP4-206ENST00000599699 C9orf135Q5VTT2 229 aa24.86■■□□□ 1.57
SSBP4-206ENST00000599699 NIPAL3Q6P499 406 aa24.86■■□□□ 1.57
SSBP4-206ENST00000599699 EPHX4Q8IUS5 362 aa24.86■■□□□ 1.57
SSBP4-206ENST00000599699 ANKS4BQ8N8V4 417 aa24.86■■□□□ 1.57
SSBP4-206ENST00000599699 FAM162AQ96A26 154 aa24.86■■□□□ 1.57
SSBP4-206ENST00000599699 MOGAT1Q96PD6 335 aa24.86■■□□□ 1.57
SSBP4-206ENST00000599699 SLCO5A1Q9H2Y9 848 aa24.86■■□□□ 1.57
SSBP4-206ENST00000599699 PLEKHF2Q9H8W4 249 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms