RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 GABRA5P31644 462 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 TGM4P49221 684 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 NOVA1P51513 510 aaKnown RBP15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 EFR3AQ14156 821 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 GALEQ14376 348 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 COL28A1Q2UY09 1125 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 CRTC2Q53ET0 693 aaPredicted RBP15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 BICRALQ6AI39 1079 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 FAM198BQ6UWH4 519 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 FAM122BQ7Z309 247 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 MR1Q95460 341 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 ULBP3Q9BZM4 244 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 WDR54Q9H977 334 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 ASB6Q9NWX5 421 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 QPCTLQ9NXS2 382 aa15.47■□□□□ 0.07
SHKBP1-216ENST00000598201 EXPH5Q8NEV8 1989 aa15.46■□□□□ 0.07
SHKBP1-216ENST00000598201 BGLAPP02818 100 aa15.46■□□□□ 0.07
SHKBP1-216ENST00000598201 HCCSP53701 268 aa15.46■□□□□ 0.07
SHKBP1-216ENST00000598201 ZNF85Q03923 595 aa15.46■□□□□ 0.07
SHKBP1-216ENST00000598201 RPL18Q07020 188 aaKnown RBP15.46■□□□□ 0.07
SHKBP1-216ENST00000598201 ISXQ2M1V0 245 aa15.46■□□□□ 0.07
SHKBP1-216ENST00000598201 ALG10Q5BKT4 473 aa15.46■□□□□ 0.07
SHKBP1-216ENST00000598201 TMPRSS11AQ6ZMR5 421 aa15.46■□□□□ 0.07
SHKBP1-216ENST00000598201 ADGRG3Q86Y34 549 aa15.46■□□□□ 0.07
SHKBP1-216ENST00000598201 RFLNBQ8N5W9 214 aa15.46■□□□□ 0.07
SHKBP1-216ENST00000598201 SYT14Q8NB59 555 aa15.46■□□□□ 0.07
SHKBP1-216ENST00000598201 ATP6V1C2Q8NEY4 427 aa15.46■□□□□ 0.07
SHKBP1-216ENST00000598201 OR8K3Q8NH51 312 aa15.46■□□□□ 0.07
SHKBP1-216ENST00000598201 RELTQ969Z4 430 aa15.46■□□□□ 0.07
SHKBP1-216ENST00000598201 LRFN5Q96NI6 719 aa15.46■□□□□ 0.07
SHKBP1-216ENST00000598201 NPAS1Q99742 590 aa15.46■□□□□ 0.07
SHKBP1-216ENST00000598201 KCNS3Q9BQ31 491 aa15.46■□□□□ 0.07
SHKBP1-216ENST00000598201 NMNAT2Q9BZQ4 307 aa15.46■□□□□ 0.07
SHKBP1-216ENST00000598201 SNTG1Q9NSN8 517 aa15.46■□□□□ 0.07
SHKBP1-216ENST00000598201 C19orf25Q9UFG5 118 aaPredicted RBP15.46■□□□□ 0.07
SHKBP1-216ENST00000598201 PCDHGA1Q9Y5H4 931 aa15.46■□□□□ 0.07
SHKBP1-216ENST00000598201 HRH3Q9Y5N1 445 aa15.46■□□□□ 0.07
SHKBP1-216ENST00000598201 TMED7-TICAM2A0A0A6YYA0 188 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 A0A1W2PQL4 384 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 TFP02787 698 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 KLK3P07288 261 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 UMODP07911 640 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 CD14P08571 375 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 CLEC2LP0C7M8 214 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 SOX6P35712 828 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 CDKN2AP42771 156 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 CTXN1P60606 82 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 IFITM3Q01628 133 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 INSL4Q14641 139 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 CD200R1LQ6Q8B3 271 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 LYPD8Q6UX82 237 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 SSX6Q7RTT6 188 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 OR5L2Q8NGL0 311 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 PTDSS2Q9BVG9 487 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 TMED9Q9BVK6 235 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 BABAM2Q9NXR7 383 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 TAS2R10Q9NYW0 307 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 MYOTQ9UBF9 498 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 GPN3Q9UHW5 284 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 ZMIZ1Q9ULJ6 1067 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 TMED7Q9Y3B3 224 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 hCG_2014768A0A024R1R8 64 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 TMEM72A0PK05 275 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 DCDC2BA2VCK2 349 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 E9PI62 339 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 IDH3BO43837 385 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 SUSD5O60279 629 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 KLF7O75840 302 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 OR2J2O76002 312 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 ZFAND5O76080 213 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 CDRT1O95170 752 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 POLR2HP52434 150 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 MXD1Q05195 221 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 PCOLCEQ15113 449 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 NUP54Q7Z3B4 507 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 ARIH2OSQ8N7S6 290 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 TPK1Q9H3S4 243 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 INPP5EQ9NRR6 644 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 SLC39A1Q9NY26 324 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 DLL3Q9NYJ7 618 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 ZNF229Q9UJW7 825 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 B3GNT3Q9Y2A9 372 aa15.45■□□□□ 0.06
SHKBP1-216ENST00000598201 COL27A1Q8IZC6 1860 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 TRAV36DV7A0A075B6V5 113 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 CTDSP2O14595 271 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 NPIPB7O75200 414 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 FTH1P19P0C7X4 201 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 SPI1P17947 270 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 E2F1Q01094 437 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 LEG1Q6P5S2 330 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 LYPD4Q6UWN0 246 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 NANOGNBQ7Z5D8 188 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 LSM14AQ8ND56 463 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 RNF138Q8WVD3 245 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 TMCO6Q96DC7 493 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 HDHD5Q9BXW7 423 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 NUAK2Q9H093 628 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 FKRPQ9H9S5 495 aa15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 NXT1Q9UKK6 140 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-216ENST00000598201 PTRH2Q9Y3E5 179 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms