RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 LTBQ06643 244 aa13.23□□□□□ -0.29
LIG1-215ENST00000597901 KLHL17Q6TDP4 642 aa13.23□□□□□ -0.29
LIG1-215ENST00000597901 C6orf89Q6UWU4 347 aa13.23□□□□□ -0.29
LIG1-215ENST00000597901 TMEM108Q6UXF1 575 aa13.23□□□□□ -0.29
LIG1-215ENST00000597901 RETREG3Q86VR2 466 aa13.23□□□□□ -0.29
LIG1-215ENST00000597901 POMGNT2Q8NAT1 580 aa13.23□□□□□ -0.29
LIG1-215ENST00000597901 HIPK4Q8NE63 616 aa13.23□□□□□ -0.29
LIG1-215ENST00000597901 C1orf162Q8NEQ5 155 aaPredicted RBP13.23□□□□□ -0.29
LIG1-215ENST00000597901 DNAJA4Q8WW22 397 aaPredicted RBP13.23□□□□□ -0.29
LIG1-215ENST00000597901 TAAR8Q969N4 342 aa13.23□□□□□ -0.29
LIG1-215ENST00000597901 TRMT61AQ96FX7 289 aaKnown RBP13.23□□□□□ -0.29
LIG1-215ENST00000597901 COX4I2Q96KJ9 171 aa13.23□□□□□ -0.29
LIG1-215ENST00000597901 ANKRD27Q96NW4 1050 aa13.23□□□□□ -0.29
LIG1-215ENST00000597901 CGREF1Q99674 301 aa13.23□□□□□ -0.29
LIG1-215ENST00000597901 WFDC6Q9BQY6 131 aa13.23□□□□□ -0.29
LIG1-215ENST00000597901 SIKE1Q9BRV8 207 aa13.23□□□□□ -0.29
LIG1-215ENST00000597901 AMBRA1Q9C0C7 1298 aa13.23□□□□□ -0.29
LIG1-215ENST00000597901 SLCO5A1Q9H2Y9 848 aa13.23□□□□□ -0.29
LIG1-215ENST00000597901 SLC17A5Q9NRA2 495 aa13.23□□□□□ -0.29
LIG1-215ENST00000597901 MGAT4BQ9UQ53 548 aa13.23□□□□□ -0.29
LIG1-215ENST00000597901 ROS1P08922 2347 aa13.23□□□□□ -0.29
LIG1-215ENST00000597901 E7EQL1 145 aa13.22□□□□□ -0.29
LIG1-215ENST00000597901 M0QX08 132 aa13.22□□□□□ -0.29
LIG1-215ENST00000597901 SMAD7O15105 426 aaKnown RBP13.22□□□□□ -0.29
LIG1-215ENST00000597901 ANGPT2O15123 496 aa13.22□□□□□ -0.29
LIG1-215ENST00000597901 OR2T1O43869 369 aa13.22□□□□□ -0.29
LIG1-215ENST00000597901 TPST2O60704 377 aa13.22□□□□□ -0.29
LIG1-215ENST00000597901 MFN2O95140 757 aa13.22□□□□□ -0.29
LIG1-215ENST00000597901 PNMTP11086 282 aa13.22□□□□□ -0.29
LIG1-215ENST00000597901 AQP1P29972 269 aa13.22□□□□□ -0.29
LIG1-215ENST00000597901 SELENOPP49908 381 aa13.22□□□□□ -0.29
LIG1-215ENST00000597901 DMTNQ08495 405 aa13.22□□□□□ -0.29
LIG1-215ENST00000597901 SELPLGQ14242 412 aa13.22□□□□□ -0.29
LIG1-215ENST00000597901 ULK3Q6PHR2 472 aa13.22□□□□□ -0.29
LIG1-215ENST00000597901 NET1Q7Z628 596 aaPredicted RBP13.22□□□□□ -0.29
LIG1-215ENST00000597901 DHDDSQ86SQ9 333 aa13.22□□□□□ -0.29
LIG1-215ENST00000597901 PTOV1Q86YD1 416 aa13.22□□□□□ -0.29
LIG1-215ENST00000597901 ARMC8Q8IUR7 673 aa13.22□□□□□ -0.29
LIG1-215ENST00000597901 PIAS4Q8N2W9 510 aaPredicted RBP13.22□□□□□ -0.29
LIG1-215ENST00000597901 C17orf78Q8N4C9 275 aa13.22□□□□□ -0.29
LIG1-215ENST00000597901 BHLHE22Q8NFJ8 381 aaPredicted RBP13.22□□□□□ -0.29
LIG1-215ENST00000597901 SLC38A4Q969I6 547 aa13.22□□□□□ -0.29
LIG1-215ENST00000597901 GTPBP3Q969Y2 492 aaKnown RBP13.22□□□□□ -0.29
LIG1-215ENST00000597901 SLC47A1Q96FL8 570 aa13.22□□□□□ -0.29
LIG1-215ENST00000597901 TMEM27Q9HBJ8 222 aa13.22□□□□□ -0.29
LIG1-215ENST00000597901 MAGED1Q9Y5V3 778 aaPredicted RBP13.22□□□□□ -0.29
LIG1-215ENST00000597901 IGKV1D-42A0A075B6H8 117 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 M0R1B8 84 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 KRT33AO76009 404 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 CDH2P19022 906 aaPredicted RBP13.21□□□□□ -0.29
LIG1-215ENST00000597901 PTNP21246 168 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 CDKN1AP38936 164 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 PRPS1P60891 318 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 LGALS3BPQ08380 585 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 RBBP4Q09028 425 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 NFYCQ13952 458 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 OR1Q1Q15612 314 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 ALG10BQ5I7T1 473 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 C1QTNF12Q5T7M4 302 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 FAM91A1Q658Y4 838 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 NIPAL3Q6P499 406 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 SLC22A25Q6T423 547 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 C5orf46Q6UWT4 87 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 DEPDC4Q8N2C3 294 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 SMYD1Q8NB12 490 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 C11orf65Q8NCR3 313 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 BOD1Q96IK1 185 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 OXGR1Q96P68 337 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 TRAF4Q9BUZ4 470 aaPredicted RBP13.21□□□□□ -0.29
LIG1-215ENST00000597901 GRIP2Q9C0E4 1043 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 SEC14L4Q9UDX3 406 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 SLC13A4Q9UKG4 626 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 ANGPT4Q9Y264 503 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 AMDHD2Q9Y303 409 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 DSCAMO60469 2012 aa13.21□□□□□ -0.29
LIG1-215ENST00000597901 RAI1Q7Z5J4 1906 aaPredicted RBP13.21□□□□□ -0.3
LIG1-215ENST00000597901 ZFHX3Q15911 3703 aa13.2□□□□□ -0.3
LIG1-215ENST00000597901 TRAV36DV7A0A075B6V5 113 aa13.2□□□□□ -0.3
LIG1-215ENST00000597901 A0A087WUJ7 227 aa13.2□□□□□ -0.3
LIG1-215ENST00000597901 OR6C65A6NJZ3 312 aa13.2□□□□□ -0.3
LIG1-215ENST00000597901 FZD7O75084 574 aa13.2□□□□□ -0.3
LIG1-215ENST00000597901 UPK3AO75631 287 aa13.2□□□□□ -0.3
LIG1-215ENST00000597901 LGI1O95970 557 aa13.2□□□□□ -0.3
LIG1-215ENST00000597901 HEXAP06865 529 aa13.2□□□□□ -0.3
LIG1-215ENST00000597901 ZNF43P17038 809 aa13.2□□□□□ -0.3
LIG1-215ENST00000597901 GTF2E2P29084 291 aaKnown RBP13.2□□□□□ -0.3
LIG1-215ENST00000597901 CDH11P55287 796 aa13.2□□□□□ -0.3
LIG1-215ENST00000597901 CLDN17P56750 224 aa13.2□□□□□ -0.3
LIG1-215ENST00000597901 PCBP3P57721 371 aaKnown RBP13.2□□□□□ -0.3
LIG1-215ENST00000597901 RGS8P57771 180 aaPredicted RBP13.2□□□□□ -0.3
LIG1-215ENST00000597901 MTPNP58546 118 aa13.2□□□□□ -0.3
LIG1-215ENST00000597901 SLC25A3Q00325 362 aa13.2□□□□□ -0.3
LIG1-215ENST00000597901 TNK1Q13470 666 aa13.2□□□□□ -0.3
LIG1-215ENST00000597901 DUSP7Q16829 419 aa13.2□□□□□ -0.3
LIG1-215ENST00000597901 CYP51A1Q16850 503 aa13.2□□□□□ -0.3
LIG1-215ENST00000597901 FAM69AQ5T7M9 428 aa13.2□□□□□ -0.3
LIG1-215ENST00000597901 AGAP6Q5VW22 663 aa13.2□□□□□ -0.3
LIG1-215ENST00000597901 H1FNTQ75WM6 255 aaPredicted RBP13.2□□□□□ -0.3
LIG1-215ENST00000597901 ABHD12BQ7Z5M8 362 aaPredicted RBP13.2□□□□□ -0.3
LIG1-215ENST00000597901 DTX2Q86UW9 622 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms