RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 KDM8Q8N371 416 aa10.54□□□□□ -0.72
SOX2-OT-228ENST00000597828 OR9I1Q8NGQ6 314 aa10.54□□□□□ -0.72
SOX2-OT-228ENST00000597828 OR1K1Q8NGR3 316 aa10.54□□□□□ -0.72
SOX2-OT-228ENST00000597828 VPS33AQ96AX1 596 aa10.54□□□□□ -0.72
SOX2-OT-228ENST00000597828 MTHFD2LQ9H903 347 aaPredicted RBP10.54□□□□□ -0.72
SOX2-OT-228ENST00000597828 MED4Q9NPJ6 270 aa10.54□□□□□ -0.72
SOX2-OT-228ENST00000597828 P2RX2Q9UBL9 471 aa10.54□□□□□ -0.72
SOX2-OT-228ENST00000597828 CDC42EP3Q9UKI2 254 aa10.54□□□□□ -0.72
SOX2-OT-228ENST00000597828 A0A096LPE4 126 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 A0A1W2PPZ6 126 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 TMEM229AB2RXF0 380 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 SASH3O75995 380 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 WNT11O96014 354 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 NUDT7P0C024 238 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 UQCRBP14927 111 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 USF1P22415 310 aaPredicted RBP10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 CALCRP30988 508 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 CRATP43155 626 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 ANXA11P50995 505 aaKnown RBP10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 DSTNP60981 165 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 LSM11P83369 360 aaKnown RBP eCLIP10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 HOXC5Q00444 222 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 TGFBR3Q03167 851 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 CHRNB3Q05901 458 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 GNA13Q14344 377 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 CARTPTQ16568 116 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 SLC9B1Q4ZJI4 515 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 LIN52Q52LA3 116 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 RNF220Q5VTB9 566 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 C1orf140Q5VVS0 124 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 PRAMEF8Q5VWM4 474 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 PRAMEF7Q5VXH5 474 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 ATG16L1Q676U5 607 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 CYB5R2Q6BCY4 276 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 TMEM225Q6GV28 225 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 WBP2NLQ6ICG8 309 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 CREB3L2Q70SY1 520 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 MAVSQ7Z434 540 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 SPATA19Q7Z5L4 167 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 EPHX4Q8IUS5 362 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 POMGNT2Q8NAT1 580 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 SLC38A5Q8WUX1 472 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 TMEM158Q8WZ71 300 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 PROX1Q92786 737 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 TMEM19Q96HH6 336 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 SLC38A2Q96QD8 506 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 VRK1Q99986 396 aaPredicted RBP10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 SOX7Q9BT81 388 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 SF3B5Q9BWJ5 86 aaKnown RBP10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 PRR14Q9BWN1 585 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 TAPBPLQ9BX59 468 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 RSPO3Q9BXY4 272 aaPredicted RBP10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 BEX2Q9BXY8 128 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 PMF1-BGLAPU3KQ54 211 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 TANC2Q9HCD6 1990 aa10.53□□□□□ -0.72
SOX2-OT-228ENST00000597828 IGHV4-61A0A0C4DH41 118 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 ZNF503-AS2A6NEH8 195 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 A8MVM7 634 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 FTCDNL1E5RQL4 147 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 ZNF587BE7ETH6 402 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 LMX1BO60663 402 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 NPIPB7O75200 414 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 KRT33AO76009 404 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 SEC14L2O76054 403 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 SNUPNO95149 360 aaKnown RBP10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 KRT75O95678 551 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 F12P00748 615 aaPredicted RBP10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 CSF3P09919 207 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 TFPTP0C1Z6 253 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 CECR9P0C854 216 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 PNMTP11086 282 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 NCF2P19878 526 aaPredicted RBP10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 RPS5P46782 204 aaKnown RBP10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 PDLIM4P50479 330 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 SNRPD2P62316 118 aaKnown RBP10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 NAAAQ02083 359 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 EGR4Q05215 589 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 ADIPOQQ15848 244 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 GSTA3Q16772 222 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 NXNQ6DKJ4 435 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 SLC46A3Q7Z3Q1 461 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 ZNF440Q8IYI8 595 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 BCL2L2Q92843 193 aaPredicted RBP10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 SLC25A36Q96CQ1 311 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 ZBTB18Q99592 522 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 PIMREGQ9BSJ6 248 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 PTDSS2Q9BVG9 487 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 SHARPINQ9H0F6 387 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 TPT1P8Q9HAU6 139 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 CA10Q9NS85 328 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 INTS9Q9NV88 658 aaKnown RBP10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 ZNF446Q9NWS9 450 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 TMEM160Q9NX00 188 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 FKBP7Q9Y680 259 aa10.52□□□□□ -0.73
SOX2-OT-228ENST00000597828 ANK2Q01484 3957 aa10.51□□□□□ -0.73
SOX2-OT-228ENST00000597828 HDAC3O15379 428 aa10.51□□□□□ -0.73
SOX2-OT-228ENST00000597828 SNNO75324 88 aaPredicted RBP10.51□□□□□ -0.73
SOX2-OT-228ENST00000597828 ANP32DO95626 131 aa10.51□□□□□ -0.73
SOX2-OT-228ENST00000597828 NR4A2P43354 598 aa10.51□□□□□ -0.73
SOX2-OT-228ENST00000597828 MAP2K6P52564 334 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms