RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 PIK3IP1Q96FE7 263 aa18.62■□□□□ 0.57
PNKP-209ENST00000596726 ZNF385AQ96PM9 386 aaKnown RBP18.62■□□□□ 0.57
PNKP-209ENST00000596726 TMEM43Q9BTV4 400 aa18.62■□□□□ 0.57
PNKP-209ENST00000596726 MALT1Q9UDY8 824 aa18.62■□□□□ 0.57
PNKP-209ENST00000596726 RASD1Q9Y272 281 aa18.62■□□□□ 0.57
PNKP-209ENST00000596726 ENO4A6NNW6 628 aa18.61■□□□□ 0.57
PNKP-209ENST00000596726 NME4O00746 187 aa18.61■□□□□ 0.57
PNKP-209ENST00000596726 LYZL6O75951 148 aa18.61■□□□□ 0.57
PNKP-209ENST00000596726 IGHV3-9P01782 118 aa18.61■□□□□ 0.57
PNKP-209ENST00000596726 THY1P04216 161 aa18.61■□□□□ 0.57
PNKP-209ENST00000596726 KDELR2P33947 212 aa18.61■□□□□ 0.57
PNKP-209ENST00000596726 TESK1Q15569 626 aa18.61■□□□□ 0.57
PNKP-209ENST00000596726 CASP12Q6UXS9 341 aa18.61■□□□□ 0.57
PNKP-209ENST00000596726 CREB3L2Q70SY1 520 aa18.61■□□□□ 0.57
PNKP-209ENST00000596726 GPAT4Q86UL3 456 aa18.61■□□□□ 0.57
PNKP-209ENST00000596726 P3H2Q8IVL5 708 aa18.61■□□□□ 0.57
PNKP-209ENST00000596726 HSD17B8Q92506 261 aa18.61■□□□□ 0.57
PNKP-209ENST00000596726 GMPR2Q9P2T1 348 aaKnown RBP18.61■□□□□ 0.57
PNKP-209ENST00000596726 BAG5Q9UL15 447 aa18.61■□□□□ 0.57
PNKP-209ENST00000596726 RAI1Q7Z5J4 1906 aaPredicted RBP18.61■□□□□ 0.57
PNKP-209ENST00000596726 CPSF4LA6NMK7 179 aaKnown RBP18.6■□□□□ 0.57
PNKP-209ENST00000596726 PDLIM1O00151 329 aa18.6■□□□□ 0.57
PNKP-209ENST00000596726 CHP2O43745 196 aa18.6■□□□□ 0.57
PNKP-209ENST00000596726 IFNA14P01570 189 aa18.6■□□□□ 0.57
PNKP-209ENST00000596726 NUDT2P50583 147 aa18.6■□□□□ 0.57
PNKP-209ENST00000596726 IST1P53990 364 aa18.6■□□□□ 0.57
PNKP-209ENST00000596726 LIPEQ05469 1076 aa18.6■□□□□ 0.57
PNKP-209ENST00000596726 LTBQ06643 244 aa18.6■□□□□ 0.57
PNKP-209ENST00000596726 TAB1Q15750 504 aa18.6■□□□□ 0.57
PNKP-209ENST00000596726 BEX5Q5H9J7 111 aa18.6■□□□□ 0.57
PNKP-209ENST00000596726 PAMR1Q6UXH9 720 aa18.6■□□□□ 0.57
PNKP-209ENST00000596726 EPHX4Q8IUS5 362 aa18.6■□□□□ 0.57
PNKP-209ENST00000596726 UBE2J2Q8N2K1 259 aa18.6■□□□□ 0.57
PNKP-209ENST00000596726 RNF217Q8TC41 542 aa18.6■□□□□ 0.57
PNKP-209ENST00000596726 ADAMTS16Q8TE57 1224 aa18.6■□□□□ 0.57
PNKP-209ENST00000596726 PROX1Q92786 737 aa18.6■□□□□ 0.57
PNKP-209ENST00000596726 HS3ST6Q96QI5 342 aa18.6■□□□□ 0.57
PNKP-209ENST00000596726 EPYCQ99645 322 aa18.6■□□□□ 0.57
PNKP-209ENST00000596726 SLC7A10Q9NS82 523 aa18.6■□□□□ 0.57
PNKP-209ENST00000596726 SEC14L4Q9UDX3 406 aa18.6■□□□□ 0.57
PNKP-209ENST00000596726 B3GALT5Q9Y2C3 310 aa18.6■□□□□ 0.57
PNKP-209ENST00000596726 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.59■□□□□ 0.57
PNKP-209ENST00000596726 TRAPPC13A5PLN9 417 aa18.59■□□□□ 0.57
PNKP-209ENST00000596726 BGLAPP02818 100 aa18.59■□□□□ 0.57
PNKP-209ENST00000596726 GRPRP30550 384 aa18.59■□□□□ 0.57
PNKP-209ENST00000596726 SLC7A2P52569 658 aa18.59■□□□□ 0.57
PNKP-209ENST00000596726 CYBRD1Q53TN4 286 aa18.59■□□□□ 0.57
PNKP-209ENST00000596726 TSPO2Q5TGU0 170 aa18.59■□□□□ 0.57
PNKP-209ENST00000596726 SEZ6L2Q6UXD5 910 aa18.59■□□□□ 0.57
PNKP-209ENST00000596726 WDR88Q6ZMY6 472 aa18.59■□□□□ 0.57
PNKP-209ENST00000596726 AAED1Q7RTV5 226 aa18.59■□□□□ 0.57
PNKP-209ENST00000596726 CARM1Q86X55 608 aa18.59■□□□□ 0.57
PNKP-209ENST00000596726 WFDC8Q8IUA0 241 aa18.59■□□□□ 0.57
PNKP-209ENST00000596726 SLC41A3Q96GZ6 507 aa18.59■□□□□ 0.57
PNKP-209ENST00000596726 ASB6Q9NWX5 421 aa18.59■□□□□ 0.57
PNKP-209ENST00000596726 B3GAT1Q9P2W7 334 aa18.59■□□□□ 0.57
PNKP-209ENST00000596726 ITGB1BP2Q9UKP3 347 aa18.59■□□□□ 0.57
PNKP-209ENST00000596726 EDARQ9UNE0 448 aa18.59■□□□□ 0.57
PNKP-209ENST00000596726 ARL2BPQ9Y2Y0 163 aa18.59■□□□□ 0.57
PNKP-209ENST00000596726 SH3GLB1Q9Y371 365 aa18.59■□□□□ 0.57
PNKP-209ENST00000596726 LOC102725191A0A1B0GVB3 256 aa18.58■□□□□ 0.56
PNKP-209ENST00000596726 M0R082 166 aa18.58■□□□□ 0.56
PNKP-209ENST00000596726 ITGA5P08648 1049 aa18.58■□□□□ 0.56
PNKP-209ENST00000596726 GTF2E2P29084 291 aaKnown RBP18.58■□□□□ 0.56
PNKP-209ENST00000596726 FOXG1P55316 489 aaPredicted RBP18.58■□□□□ 0.56
PNKP-209ENST00000596726 FAPQ12884 760 aa18.58■□□□□ 0.56
PNKP-209ENST00000596726 MFSD13AQ14CX5 517 aa18.58■□□□□ 0.56
PNKP-209ENST00000596726 LRRC23Q53EV4 343 aaPredicted RBP18.58■□□□□ 0.56
PNKP-209ENST00000596726 H1FNTQ75WM6 255 aaPredicted RBP18.58■□□□□ 0.56
PNKP-209ENST00000596726 LURAP1LQ8IV03 231 aa18.58■□□□□ 0.56
PNKP-209ENST00000596726 KDM8Q8N371 416 aa18.58■□□□□ 0.56
PNKP-209ENST00000596726 ADPRHL1Q8NDY3 354 aa18.58■□□□□ 0.56
PNKP-209ENST00000596726 ZNF417Q8TAU3 575 aa18.58■□□□□ 0.56
PNKP-209ENST00000596726 OXGR1Q96P68 337 aa18.58■□□□□ 0.56
PNKP-209ENST00000596726 ZNF587Q96SQ5 575 aaPredicted RBP18.58■□□□□ 0.56
PNKP-209ENST00000596726 ZNF426Q9BUY5 554 aa18.58■□□□□ 0.56
PNKP-209ENST00000596726 TAS2R16Q9NYV7 291 aa18.58■□□□□ 0.56
PNKP-209ENST00000596726 ABCD2Q9UBJ2 740 aa18.58■□□□□ 0.56
PNKP-209ENST00000596726 ROS1P08922 2347 aa18.58■□□□□ 0.56
PNKP-209ENST00000596726 CELSR1Q9NYQ6 3014 aa18.58■□□□□ 0.56
PNKP-209ENST00000596726 MS4A18H0YCH9 400 aa18.57■□□□□ 0.56
PNKP-209ENST00000596726 GGT1P19440 569 aa18.57■□□□□ 0.56
PNKP-209ENST00000596726 TNFRSF1BP20333 461 aa18.57■□□□□ 0.56
PNKP-209ENST00000596726 GSK3BP49841 420 aa18.57■□□□□ 0.56
PNKP-209ENST00000596726 NR1H2P55055 460 aa18.57■□□□□ 0.56
PNKP-209ENST00000596726 PSME3P61289 254 aa18.57■□□□□ 0.56
PNKP-209ENST00000596726 SELENOWP63302 87 aa18.57■□□□□ 0.56
PNKP-209ENST00000596726 MS4A18Q3C1V0 323 aa18.57■□□□□ 0.56
PNKP-209ENST00000596726 TIMM23BQ5SRD1 257 aa18.57■□□□□ 0.56
PNKP-209ENST00000596726 P2RY8Q86VZ1 359 aa18.57■□□□□ 0.56
PNKP-209ENST00000596726 SCAIQ8N9R8 606 aa18.57■□□□□ 0.56
PNKP-209ENST00000596726 PLPPR2Q96GM1 343 aa18.57■□□□□ 0.56
PNKP-209ENST00000596726 MPP4Q96JB8 637 aa18.57■□□□□ 0.56
PNKP-209ENST00000596726 MUS81Q96NY9 551 aa18.57■□□□□ 0.56
PNKP-209ENST00000596726 MOGAT1Q96PD6 335 aa18.57■□□□□ 0.56
PNKP-209ENST00000596726 PRSS27Q9BQR3 290 aa18.57■□□□□ 0.56
PNKP-209ENST00000596726 TMEM204Q9BSN7 226 aa18.57■□□□□ 0.56
PNKP-209ENST00000596726 AMBRA1Q9C0C7 1298 aa18.57■□□□□ 0.56
PNKP-209ENST00000596726 POLR2J2Q9GZM3 115 aaKnown RBP18.57■□□□□ 0.56
PNKP-209ENST00000596726 POLR2J3Q9H1A7 115 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms