RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 OR5F1O95221 314 aa15.31■□□□□ 0.04
SHKBP1-212ENST00000596163 ZNF682O95780 498 aa15.31■□□□□ 0.04
SHKBP1-212ENST00000596163 MT-ATP6P00846 226 aa15.31■□□□□ 0.04
SHKBP1-212ENST00000596163 GGT1P19440 569 aa15.31■□□□□ 0.04
SHKBP1-212ENST00000596163 GRPRP30550 384 aa15.31■□□□□ 0.04
SHKBP1-212ENST00000596163 POU4F3Q15319 338 aa15.31■□□□□ 0.04
SHKBP1-212ENST00000596163 SFRP5Q5T4F7 317 aa15.31■□□□□ 0.04
SHKBP1-212ENST00000596163 GLYATQ6IB77 296 aa15.31■□□□□ 0.04
SHKBP1-212ENST00000596163 CASP12Q6UXS9 341 aa15.31■□□□□ 0.04
SHKBP1-212ENST00000596163 FKBP9P1Q75LS8 142 aa15.31■□□□□ 0.04
SHKBP1-212ENST00000596163 CBLL1Q75N03 491 aa15.31■□□□□ 0.04
SHKBP1-212ENST00000596163 H1FNTQ75WM6 255 aaPredicted RBP15.31■□□□□ 0.04
SHKBP1-212ENST00000596163 CXorf67Q86X51 503 aaPredicted RBP15.31■□□□□ 0.04
SHKBP1-212ENST00000596163 ADPRHL1Q8NDY3 354 aa15.31■□□□□ 0.04
SHKBP1-212ENST00000596163 KISS1RQ969F8 398 aaPredicted RBP15.31■□□□□ 0.04
SHKBP1-212ENST00000596163 LURAP1Q96LR2 239 aa15.31■□□□□ 0.04
SHKBP1-212ENST00000596163 CDRT15Q96T59 188 aa15.31■□□□□ 0.04
SHKBP1-212ENST00000596163 POLDIP3Q9BY77 421 aaKnown RBP15.31■□□□□ 0.04
SHKBP1-212ENST00000596163 RASSF1Q9NS23 344 aa15.31■□□□□ 0.04
SHKBP1-212ENST00000596163 GMPR2Q9P2T1 348 aaKnown RBP15.31■□□□□ 0.04
SHKBP1-212ENST00000596163 EDARQ9UNE0 448 aa15.31■□□□□ 0.04
SHKBP1-212ENST00000596163 FAM221AA4D161 298 aa15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 OR6C65A6NJZ3 312 aa15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 SERPINA1P01009 418 aa15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 IFNW1P05000 195 aa15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 ZNF43P17038 809 aa15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 TNFRSF1BP20333 461 aa15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 OR1E2P47887 323 aa15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 SLC25A3Q00325 362 aa15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 C1DQ13901 141 aaKnown RBP15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 IFI44LQ53G44 452 aa15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 ANKRD34AQ69YU3 496 aa15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 SSX8Q7RTT4 187 aa15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 AAED1Q7RTV5 226 aa15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 P3H2Q8IVL5 708 aa15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 ADGRG4Q8IZF6 3080 aa15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 SCAIQ8N9R8 606 aa15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 BCAS4Q8TDM0 211 aa15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 GEMIN6Q8WXD5 167 aaKnown RBP15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 HS6ST2Q96MM7 605 aa15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 OXGR1Q96P68 337 aa15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 ACTR6Q9GZN1 396 aa15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 ASB6Q9NWX5 421 aa15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 UPB1Q9UBR1 384 aa15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 PRSS50Q9UI38 385 aa15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 RIMS3Q9UJD0 308 aa15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 NBPF19A0A087WUL8 3843 aa15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 CELSR2Q9HCU4 2923 aa15.3■□□□□ 0.04
SHKBP1-212ENST00000596163 LOC102725191A0A1B0GVB3 256 aa15.29■□□□□ 0.04
SHKBP1-212ENST00000596163 B2RBV5 119 aa15.29■□□□□ 0.04
SHKBP1-212ENST00000596163 M0R082 166 aa15.29■□□□□ 0.04
SHKBP1-212ENST00000596163 AKAP8O43823 692 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-212ENST00000596163 BGLAPP02818 100 aa15.29■□□□□ 0.04
SHKBP1-212ENST00000596163 HSD17B1P14061 328 aa15.29■□□□□ 0.04
SHKBP1-212ENST00000596163 NQO1P15559 274 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-212ENST00000596163 CALB2P22676 271 aa15.29■□□□□ 0.04
SHKBP1-212ENST00000596163 CCKARP32238 428 aa15.29■□□□□ 0.04
SHKBP1-212ENST00000596163 RBM34P42696 430 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-212ENST00000596163 P2RY4P51582 365 aa15.29■□□□□ 0.04
SHKBP1-212ENST00000596163 IL1RL1Q01638 556 aa15.29■□□□□ 0.04
SHKBP1-212ENST00000596163 ST3GAL3Q11203 375 aa15.29■□□□□ 0.04
SHKBP1-212ENST00000596163 CREB3L2Q70SY1 520 aa15.29■□□□□ 0.04
SHKBP1-212ENST00000596163 BHLHA15Q7RTS1 189 aaPredicted RBP15.29■□□□□ 0.04
SHKBP1-212ENST00000596163 ABHD12BQ7Z5M8 362 aaPredicted RBP15.29■□□□□ 0.04
SHKBP1-212ENST00000596163 DEFB107AQ8IZN7 70 aa15.29■□□□□ 0.04
SHKBP1-212ENST00000596163 POMGNT2Q8NAT1 580 aa15.29■□□□□ 0.04
SHKBP1-212ENST00000596163 ZNF417Q8TAU3 575 aa15.29■□□□□ 0.04
SHKBP1-212ENST00000596163 HSD17B8Q92506 261 aa15.29■□□□□ 0.04
SHKBP1-212ENST00000596163 ZNF587Q96SQ5 575 aaPredicted RBP15.29■□□□□ 0.04
SHKBP1-212ENST00000596163 CLEC4MQ9H2X3 399 aaPredicted RBP15.29■□□□□ 0.04
SHKBP1-212ENST00000596163 NGBQ9NPG2 151 aa15.29■□□□□ 0.04
SHKBP1-212ENST00000596163 EGFL7Q9UHF1 273 aa15.29■□□□□ 0.04
SHKBP1-212ENST00000596163 MAGEL2Q9UJ55 1249 aa15.29■□□□□ 0.04
SHKBP1-212ENST00000596163 SAMD4AQ9UPU9 718 aaKnown RBP15.29■□□□□ 0.04
SHKBP1-212ENST00000596163 ANKHD1Q8IWZ3 2542 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-212ENST00000596163 NOTCH2Q04721 2471 aa15.28■□□□□ 0.04
SHKBP1-212ENST00000596163 HTR3EA5X5Y0 456 aa15.28■□□□□ 0.04
SHKBP1-212ENST00000596163 OR6A2O95222 327 aa15.28■□□□□ 0.04
SHKBP1-212ENST00000596163 LYPD3O95274 346 aa15.28■□□□□ 0.04
SHKBP1-212ENST00000596163 THY1P04216 161 aa15.28■□□□□ 0.04
SHKBP1-212ENST00000596163 HIST1H2ABP04908 130 aa15.28■□□□□ 0.04
SHKBP1-212ENST00000596163 NCK1P16333 377 aa15.28■□□□□ 0.04
SHKBP1-212ENST00000596163 CBLP22681 906 aa15.28■□□□□ 0.04
SHKBP1-212ENST00000596163 CRYGSP22914 178 aa15.28■□□□□ 0.04
SHKBP1-212ENST00000596163 PMS2P3Q13401 168 aa15.28■□□□□ 0.04
SHKBP1-212ENST00000596163 PIN1Q13526 163 aaPredicted RBP15.28■□□□□ 0.04
SHKBP1-212ENST00000596163 HIST3H2AQ7L7L0 130 aa15.28■□□□□ 0.04
SHKBP1-212ENST00000596163 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-212ENST00000596163 CYP4Z1Q86W10 505 aa15.28■□□□□ 0.04
SHKBP1-212ENST00000596163 ARHGAP24Q8N264 748 aa15.28■□□□□ 0.04
SHKBP1-212ENST00000596163 RNF148Q8N7C7 305 aa15.28■□□□□ 0.04
SHKBP1-212ENST00000596163 ZIC4Q8N9L1 334 aa15.28■□□□□ 0.04
SHKBP1-212ENST00000596163 HIST1H2ACQ93077 130 aa15.28■□□□□ 0.04
SHKBP1-212ENST00000596163 ZC3HAV1LQ96H79 300 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-212ENST00000596163 HSH2DQ96JZ2 352 aa15.28■□□□□ 0.04
SHKBP1-212ENST00000596163 PRRC1Q96M27 445 aa15.28■□□□□ 0.04
SHKBP1-212ENST00000596163 GORASP2Q9H8Y8 452 aa15.28■□□□□ 0.04
SHKBP1-212ENST00000596163 MRPL39Q9NYK5 338 aaKnown RBP15.28■□□□□ 0.04
SHKBP1-212ENST00000596163 MALT1Q9UDY8 824 aa15.28■□□□□ 0.04
SHKBP1-212ENST00000596163 CRYBG3Q68DQ2 2970 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms