RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 SELENOWP63302 87 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 LSM11P83369 360 aaKnown RBP eCLIP9.85□□□□□ -0.83
VRK3-210ENST00000596121 LGALS3BPQ08380 585 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 PIN1Q13526 163 aaPredicted RBP9.85□□□□□ -0.83
VRK3-210ENST00000596121 MS4A18Q3C1V0 323 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 SFRP5Q5T4F7 317 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 Q6ZT83 130 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 STK32CQ86UX6 486 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 TMEM200AQ86VY9 491 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 NKAIN4Q8IVV8 208 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 ZNF100Q8IYN0 542 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 RBM15BQ8NDT2 890 aaKnown RBP9.85□□□□□ -0.83
VRK3-210ENST00000596121 ZNF417Q8TAU3 575 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 PROX1Q92786 737 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 S100PBPQ96BU1 408 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 SLC41A3Q96GZ6 507 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 TPD52L3Q96J77 140 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 ZNF587Q96SQ5 575 aaPredicted RBP9.85□□□□□ -0.83
VRK3-210ENST00000596121 KCTD14Q9BQ13 255 aaPredicted RBP9.85□□□□□ -0.83
VRK3-210ENST00000596121 TMEM43Q9BTV4 400 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 ZNF426Q9BUY5 554 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 TAPBPLQ9BX59 468 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 ACTR6Q9GZN1 396 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 SLC24A3Q9HC58 644 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 EMC3Q9P0I2 261 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 NDRG3Q9UGV2 375 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 EGFL7Q9UHF1 273 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 TAGLN3Q9UI15 199 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 BAG5Q9UL15 447 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 SLC7A7Q9UM01 511 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 AP3M1Q9Y2T2 418 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 ROS1P08922 2347 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 MYO9AB2RTY4 2548 aa9.85□□□□□ -0.83
VRK3-210ENST00000596121 TRAPPC13A5PLN9 417 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 PDLIM1O00151 329 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 GPR171O14626 319 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 FFAR1O14842 300 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 KLF4O43474 513 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 CHP2O43745 196 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 MRPL33O75394 65 aaKnown RBP9.84□□□□□ -0.83
VRK3-210ENST00000596121 DCTN3O75935 186 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 LYZL6O75951 148 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 GGT1P19440 569 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 MSX2P35548 267 aaPredicted RBP9.84□□□□□ -0.83
VRK3-210ENST00000596121 ITGADQ13349 1161 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 KRT72Q14CN4 511 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 SWT1Q5T5J6 900 aaKnown RBP9.84□□□□□ -0.83
VRK3-210ENST00000596121 FAM69AQ5T7M9 428 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 TSPO2Q5TGU0 170 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 FBXW9Q5XUX1 488 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 TMEM225Q6GV28 225 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 SEZ6L2Q6UXD5 910 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 DEF8Q6ZN54 512 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 CREB3L2Q70SY1 520 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 CBLL1Q75N03 491 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 GPAT4Q86UL3 456 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 CDC20BQ86Y33 519 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 LRRC17Q8N6Y2 441 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 FAM86B1Q8N7N1 296 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 RASSF5Q8WWW0 418 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 TMEM45BQ96B21 275 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 APH1AQ96BI3 265 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 HS3ST6Q96QI5 342 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 CDRT15Q96T59 188 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 MED18Q9BUE0 208 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 SF3B5Q9BWJ5 86 aaKnown RBP9.84□□□□□ -0.83
VRK3-210ENST00000596121 POLDIP3Q9BY77 421 aaKnown RBP9.84□□□□□ -0.83
VRK3-210ENST00000596121 AMBRA1Q9C0C7 1298 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 CLEC4MQ9H2X3 399 aaPredicted RBP9.84□□□□□ -0.83
VRK3-210ENST00000596121 SPAG4Q9NPE6 437 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 MEPEQ9NQ76 525 aaPredicted RBP9.84□□□□□ -0.83
VRK3-210ENST00000596121 SLC7A10Q9NS82 523 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 CD300AQ9UGN4 299 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 RIMS3Q9UJD0 308 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 A4GNTQ9UNA3 340 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 SLC9A8Q9Y2E8 581 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 GPR52Q9Y2T5 361 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 AKAP9Q99996 3911 aa9.84□□□□□ -0.83
VRK3-210ENST00000596121 OTOGQ6ZRI0 2925 aa9.83□□□□□ -0.84
VRK3-210ENST00000596121 J3KTA2 159 aa9.83□□□□□ -0.84
VRK3-210ENST00000596121 GSTA4O15217 222 aa9.83□□□□□ -0.84
VRK3-210ENST00000596121 OR2T1O43869 369 aa9.83□□□□□ -0.84
VRK3-210ENST00000596121 SERPINA1P01009 418 aa9.83□□□□□ -0.84
VRK3-210ENST00000596121 IFNA14P01570 189 aa9.83□□□□□ -0.84
VRK3-210ENST00000596121 ITGA5P08648 1049 aa9.83□□□□□ -0.84
VRK3-210ENST00000596121 HLA-DOBP13765 273 aa9.83□□□□□ -0.84
VRK3-210ENST00000596121 COX5AP20674 150 aa9.83□□□□□ -0.84
VRK3-210ENST00000596121 CRYGSP22914 178 aa9.83□□□□□ -0.84
VRK3-210ENST00000596121 YAP1P46937 504 aaKnown RBP9.83□□□□□ -0.84
VRK3-210ENST00000596121 SELENOPP49908 381 aa9.83□□□□□ -0.84
VRK3-210ENST00000596121 UGT2B15P54855 530 aa9.83□□□□□ -0.84
VRK3-210ENST00000596121 FOXD4Q12950 439 aaPredicted RBP9.83□□□□□ -0.84
VRK3-210ENST00000596121 P2RY6Q15077 328 aa9.83□□□□□ -0.84
VRK3-210ENST00000596121 TAB1Q15750 504 aa9.83□□□□□ -0.84
VRK3-210ENST00000596121 FXNQ16595 210 aa9.83□□□□□ -0.84
VRK3-210ENST00000596121 GKAP1Q5VSY0 366 aaPredicted RBP9.83□□□□□ -0.84
VRK3-210ENST00000596121 H1FNTQ75WM6 255 aaPredicted RBP9.83□□□□□ -0.84
VRK3-210ENST00000596121 LINGO2Q7L985 606 aa9.83□□□□□ -0.84
VRK3-210ENST00000596121 BHLHA15Q7RTS1 189 aaPredicted RBP9.83□□□□□ -0.84
VRK3-210ENST00000596121 PGAM4Q8N0Y7 254 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms