RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 TOMM20Q15388 145 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 GXYLT1Q4G148 440 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 CLEC12AQ5QGZ9 265 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 SLC6A19Q695T7 634 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 KRT80Q6KB66 452 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 NANOGNBQ7Z5D8 188 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 FAM109AQ8N4B1 249 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 RBMXL3Q8N7X1 1067 aaKnown RBP13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 ADPRHL1Q8NDY3 354 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 OR2T33Q8NG76 320 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 OR5J2Q8NH18 312 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 TRUB1Q8WWH5 349 aaKnown RBP13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 ZCCHC14Q8WYQ9 949 aaKnown RBP13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 MIB2Q96AX9 1013 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 SLC25A36Q96CQ1 311 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 DNAJA3Q96EY1 480 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 MFRPQ9BY79 579 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 TMEM185BQ9H7F4 350 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 ZDHHC11Q9H8X9 412 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 NRIP3Q9NQ35 241 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 ALKBH4Q9NXW9 302 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 TAS2R5Q9NYW4 299 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 SEC14L4Q9UDX3 406 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 IL20RAQ9UHF4 553 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 BAIAP2Q9UQB8 552 aa13.25□□□□□ -0.29
SHKBP1-211ENST00000595945 SPTA1P02549 2419 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 A0A0J9YW62 118 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 A0A1W2PNR3 127 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 TMEM8BA6NDV4 472 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 MCIDASD6RGH6 385 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 M0R082 166 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 M0R129 80 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 PLPP3O14495 311 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 ARPC3O15145 178 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 SURF4O15260 269 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 MPZL2O60487 215 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 PMS2P2O95744 297 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 OPN1LWP04000 364 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 HIST1H2ABP04908 130 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 HMGN1P05114 100 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 SFTPDP35247 375 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 AQP2P41181 271 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 PCYT1AP49585 367 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 P2RY4P51582 365 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 CHN2P52757 468 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 RPL18Q07020 188 aaKnown RBP13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 ZP4Q12836 540 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 OR7A5Q15622 319 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 TMEM201Q5SNT2 666 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 SLC25A30Q5SVS4 291 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 C6orf141Q5SZD1 244 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 CASP12Q6UXS9 341 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 DPY19L2P2Q6ZN68 376 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 TMPPEQ6ZT21 453 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 TRILQ7L0X0 811 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 HIST3H2AQ7L7L0 130 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 GGNQ86UU5 652 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 CCDC103Q8IW40 242 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 OR8J1Q8NGP2 316 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 ZNF417Q8TAU3 575 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 CNIH3Q8TBE1 160 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 EXTL1Q92935 676 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 HIST1H2ACQ93077 130 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 ABHD17AQ96GS6 310 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 ADGRG7Q96K78 797 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 KLHL15Q96M94 604 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 OR5B2Q96R09 309 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 ZNF587Q96SQ5 575 aaPredicted RBP13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 TAPBPLQ9BX59 468 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 ASPNQ9BXN1 380 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 YTHDF1Q9BYJ9 559 aaKnown RBP13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 CHST11Q9NPF2 352 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 FANCFQ9NPI8 374 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 TVP23BQ9NYZ1 205 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 AASSQ9UDR5 926 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 SLC6A5Q9Y345 797 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 CFAP47Q6ZTR5 3102 aa13.24□□□□□ -0.29
SHKBP1-211ENST00000595945 GJE1A6NN92 205 aa13.23□□□□□ -0.29
SHKBP1-211ENST00000595945 MS4A18H0YCH9 400 aa13.23□□□□□ -0.29
SHKBP1-211ENST00000595945 ACOT7O00154 380 aa13.23□□□□□ -0.29
SHKBP1-211ENST00000595945 PRKYO43930 277 aa13.23□□□□□ -0.29
SHKBP1-211ENST00000595945 PPP1R3DO95685 299 aa13.23□□□□□ -0.29
SHKBP1-211ENST00000595945 TXNDC12O95881 172 aa13.23□□□□□ -0.29
SHKBP1-211ENST00000595945 APEHP13798 732 aaKnown RBP13.23□□□□□ -0.29
SHKBP1-211ENST00000595945 CXADRP78310 365 aa13.23□□□□□ -0.29
SHKBP1-211ENST00000595945 FOXK2Q01167 660 aa13.23□□□□□ -0.29
SHKBP1-211ENST00000595945 PMP22Q01453 160 aa13.23□□□□□ -0.29
SHKBP1-211ENST00000595945 PMS2P3Q13401 168 aa13.23□□□□□ -0.29
SHKBP1-211ENST00000595945 SLC10A1Q14973 349 aa13.23□□□□□ -0.29
SHKBP1-211ENST00000595945 MS4A18Q3C1V0 323 aa13.23□□□□□ -0.29
SHKBP1-211ENST00000595945 LINC00303Q3SY05 128 aa13.23□□□□□ -0.29
SHKBP1-211ENST00000595945 ALG10Q5BKT4 473 aa13.23□□□□□ -0.29
SHKBP1-211ENST00000595945 ASB18Q6ZVZ8 466 aa13.23□□□□□ -0.29
SHKBP1-211ENST00000595945 H1FNTQ75WM6 255 aaPredicted RBP13.23□□□□□ -0.29
SHKBP1-211ENST00000595945 FAM26EQ8N5C1 309 aa13.23□□□□□ -0.29
SHKBP1-211ENST00000595945 KDF1Q8NAX2 398 aaPredicted RBP13.23□□□□□ -0.29
SHKBP1-211ENST00000595945 FAM98AQ8NCA5 519 aaKnown RBP13.23□□□□□ -0.29
SHKBP1-211ENST00000595945 TMEM163Q8TC26 289 aa13.23□□□□□ -0.29
SHKBP1-211ENST00000595945 HDAC2Q92769 488 aaKnown RBP13.23□□□□□ -0.29
SHKBP1-211ENST00000595945 ZNF566Q969W8 418 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms