RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 ZNF385AQ96PM9 386 aaKnown RBP9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 SF3B5Q9BWJ5 86 aaKnown RBP9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 TAPBPLQ9BX59 468 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 NSRP1Q9H0G5 558 aaKnown RBP9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 PCDHAC1Q9H158 963 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 EVA1AQ9H8M9 152 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 TMEM27Q9HBJ8 222 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 FANCFQ9NPI8 374 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 B3GAT1Q9P2W7 334 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 MALT1Q9UDY8 824 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 ST6GALNAC2Q9UJ37 374 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 SLC13A4Q9UKG4 626 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 PLEKHA6Q9Y2H5 1048 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 ZANQ9Y493 2812 aa9.7□□□□□ -0.86
SHKBP1-206ENST00000595523 TRAV36DV7A0A075B6V5 113 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 CPSF4LA6NMK7 179 aaKnown RBP9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 MRPL33O75394 65 aaKnown RBP9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 ITGA5P08648 1049 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 IL32P24001 234 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 NUDT2P50583 147 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 SLC7A2P52569 658 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 IST1P53990 364 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 LIPEQ05469 1076 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 SWT1Q5T5J6 900 aaKnown RBP9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 FAM69AQ5T7M9 428 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 FBXW10Q5XX13 1052 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 ZNF613Q6PF04 617 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 PAMR1Q6UXH9 720 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 CASP12Q6UXS9 341 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 HACD2Q6Y1H2 254 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 CPLX4Q7Z7G2 160 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 GPAT4Q86UL3 456 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 WFDC8Q8IUA0 241 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 EPHX4Q8IUS5 362 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 MICU2Q8IYU8 434 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 KDM8Q8N371 416 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 ZNF433Q8N7K0 673 aaPredicted RBP9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 STEAP2Q8NFT2 490 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 SLC26A7Q8TE54 656 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 ADAMTS16Q8TE57 1224 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 MOGAT1Q96PD6 335 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 HDHD5Q9BXW7 423 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 SLC7A10Q9NS82 523 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 ITGB1BP2Q9UKP3 347 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 SLC9A8Q9Y2E8 581 aa9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 SETD2Q9BYW2 2564 aaPredicted RBP9.69□□□□□ -0.86
SHKBP1-206ENST00000595523 ELOVL7A1L3X0 281 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 LRRN3E7EW58 273 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 M0R082 166 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 CHP2O43745 196 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 OR2T1O43869 369 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 SHOX2O60902 331 aaPredicted RBP9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 VAMP5O95183 116 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 ATE1O95260 518 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 HPRP00739 348 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 BGLAPP02818 100 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 CBLP22681 906 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 PRDX6P30041 224 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 GRPRP30550 384 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 KDELR2P33947 212 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 SELENOPP49908 381 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 LGALS3BPQ08380 585 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 FAPQ12884 760 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 LRRC23Q53EV4 343 aaPredicted RBP9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 CYBRD1Q53TN4 286 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 TSPO2Q5TGU0 170 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 TMEM225Q6GV28 225 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 C5orf46Q6UWT4 87 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 CREB3L2Q70SY1 520 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 ARPINQ7Z6K5 226 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 CARM1Q86X55 608 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 ZNF417Q8TAU3 575 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 RNF217Q8TC41 542 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 RASSF5Q8WWW0 418 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 NINJ1Q92982 152 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 SLC41A3Q96GZ6 507 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 ZNF587Q96SQ5 575 aaPredicted RBP9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 HOPXQ9BPY8 73 aaPredicted RBP9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 PRSS27Q9BQR3 290 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 TMEM43Q9BTV4 400 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 ZNF426Q9BUY5 554 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 EFCAB1Q9HAE3 211 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 CCM2LQ9NUG4 571 aaPredicted RBP9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 ABCD2Q9UBJ2 740 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 SLC7A7Q9UM01 511 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 RASD1Q9Y272 281 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 SH3GLB1Q9Y371 365 aa9.68□□□□□ -0.86
SHKBP1-206ENST00000595523 TRAPPC13A5PLN9 417 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 TRAF3IP2O43734 574 aaPredicted RBP9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 RAD51DO75771 328 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 ZNF432O94892 652 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 PLAUP00749 431 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 OR1E2P47887 323 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 GSK3BP49841 420 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 PSME3P61289 254 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 BEX5Q5H9J7 111 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 NHLRC1Q6VVB1 395 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 LINGO2Q7L985 606 aa9.67□□□□□ -0.86
SHKBP1-206ENST00000595523 AAED1Q7RTV5 226 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms