RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 TMEM69Q5SWH9 247 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 ZNF684Q5T5D7 378 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 SLC25A25Q6KCM7 469 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 RGS7BPQ6MZT1 257 aaPredicted RBP12.14□□□□□ -0.47
VRK3-209ENST00000594948 VITQ6UXI7 678 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 LRRN1Q6UXK5 716 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 DGLUCYQ7Z3D6 616 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 NPEPL1Q8NDH3 523 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 ELMOD3Q96FG2 381 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 GPX7Q96SL4 187 aaPredicted RBP12.14□□□□□ -0.47
VRK3-209ENST00000594948 SLC17A9Q9BYT1 436 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 CRISPLD2Q9H0B8 497 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 SRMSQ9H3Y6 488 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 OR5V1Q9UGF6 321 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 SERGEFQ9UGK8 458 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 PCOLCE2Q9UKZ9 415 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 COPS3Q9UNS2 423 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 IER3IP1Q9Y5U9 82 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 PDE4DIPQ5VU43 2346 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 ARPC4-TTLL3A0A0A6YYG9 625 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 KRBOX1C9JBD0 128 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 MCIDASD6RGH6 385 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 FGF17O60258 216 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 LDB3O75112 727 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 TOXO94900 526 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 GLCEO94923 617 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 KAT7O95251 611 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 TACSTD2P09758 323 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 CTRB1P17538 263 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 SPI1P17947 270 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 PSMD4P55036 377 aaKnown RBP12.14□□□□□ -0.47
VRK3-209ENST00000594948 DLX5P56178 289 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 KIAA1024LP59773 190 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 HTR4Q13639 388 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 ZNF141Q15928 474 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 LINC00303Q3SY05 128 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 C2orf27AQ580R0 203 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 FCRL6Q6DN72 434 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 CTRB2Q6GPI1 263 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 DNAAF1Q8NEP3 725 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 C1orf216Q8TAB5 229 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 SYNPRQ8TBG9 265 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 SCARB1Q8WTV0 552 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 CCNL2Q96S94 520 aaPredicted RBP12.14□□□□□ -0.47
VRK3-209ENST00000594948 PDCD1LG2Q9BQ51 273 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 SEC22CQ9BRL7 303 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 IL23AQ9NPF7 189 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 POT1Q9NUX5 634 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 C2orf42Q9NWW7 574 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 SDHAF2Q9NX18 166 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 MRPL15Q9P015 296 aaKnown RBP12.14□□□□□ -0.47
VRK3-209ENST00000594948 KCNMB2Q9Y691 235 aa12.14□□□□□ -0.47
VRK3-209ENST00000594948 A0A1W2PQU0 124 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 CYR61O00622 381 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 MAGEB4O15481 346 aaPredicted RBP12.13□□□□□ -0.47
VRK3-209ENST00000594948 CTNSO60931 367 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 IGF2P01344 180 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 HIST1H2ABP04908 130 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 NAGAP17050 411 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 EMDP50402 254 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 SLC25A1P53007 311 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 TAS2R20P59543 309 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 DBPQ10586 325 aaPredicted RBP12.13□□□□□ -0.47
VRK3-209ENST00000594948 ZNF776Q68DI1 518 aaPredicted RBP12.13□□□□□ -0.47
VRK3-209ENST00000594948 MTFR2Q6P444 385 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 ZC3H14Q6PJT7 736 aaKnown RBP12.13□□□□□ -0.47
VRK3-209ENST00000594948 FIGLAQ6QHK4 219 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 HIST3H2AQ7L7L0 130 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 CHMP1BQ7LBR1 199 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 MOSPD2Q8NHP6 518 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 ASB12Q8WXK4 309 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 RGP1Q92546 391 aaPredicted RBP12.13□□□□□ -0.47
VRK3-209ENST00000594948 HIST1H2ACQ93077 130 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 PNPLA2Q96AD5 504 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 HSPA12BQ96MM6 686 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 PTCHD1Q96NR3 888 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 DPYSL5Q9BPU6 564 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 TTTY10Q9BZA0 68 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 CHIAQ9BZP6 476 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 SLC19A3Q9BZV2 496 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 TRPV4Q9HBA0 871 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 TAS2R8Q9NYW2 309 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 ZNF69Q9UC07 566 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 TBC1D29Q9UFV1 150 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 MOKQ9UQ07 419 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 ZNF337Q9Y3M9 751 aa12.13□□□□□ -0.47
VRK3-209ENST00000594948 TRBV5-5A0A0J9YX44 114 aa12.12□□□□□ -0.47
VRK3-209ENST00000594948 PRSS38A1L453 326 aa12.12□□□□□ -0.47
VRK3-209ENST00000594948 ACOD1A6NK06 481 aa12.12□□□□□ -0.47
VRK3-209ENST00000594948 EFCAB7A8K855 629 aa12.12□□□□□ -0.47
VRK3-209ENST00000594948 TRIM77I1YAP6 450 aa12.12□□□□□ -0.47
VRK3-209ENST00000594948 PLRG1O43660 514 aaKnown RBP12.12□□□□□ -0.47
VRK3-209ENST00000594948 SUSD5O60279 629 aa12.12□□□□□ -0.47
VRK3-209ENST00000594948 CTSVO60911 334 aa12.12□□□□□ -0.47
VRK3-209ENST00000594948 DNAJB6O75190 326 aa12.12□□□□□ -0.47
VRK3-209ENST00000594948 ZNF432O94892 652 aa12.12□□□□□ -0.47
VRK3-209ENST00000594948 GLSO94925 669 aaPredicted RBP12.12□□□□□ -0.47
VRK3-209ENST00000594948 CT62P0C5K7 136 aa12.12□□□□□ -0.47
VRK3-209ENST00000594948 PPP3CBP16298 524 aa12.12□□□□□ -0.47
VRK3-209ENST00000594948 CFPP27918 469 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms