RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 APOL3O95236 402 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 PRKCAP17252 672 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 SPINK2P20155 84 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 SDHBP21912 280 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 MSX1P28360 303 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 PSMD7P51665 324 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 FXYD6P3P58550 94 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 RGS21Q2M5E4 152 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 ZNF404Q494X3 552 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 RTL4Q6ZR62 310 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 LINC00299Q6ZSB3 139 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 GRINAQ7Z429 371 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 WDSUB1Q8N9V3 476 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 OR52I1Q8NGK6 324 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 FANK1Q8TC84 345 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 SNRNP27Q8WVK2 155 aaKnown RBP11.98□□□□□ -0.49
VRK3-205ENST00000593919 MND1Q9BWT6 205 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 ANGPTL4Q9BY76 406 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 C6orf62Q9GZU0 229 aaPredicted RBP11.98□□□□□ -0.49
VRK3-205ENST00000593919 FAIMQ9NVQ4 179 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 FBXL2Q9UKC9 423 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 LSM2Q9Y333 95 aaKnown RBP11.98□□□□□ -0.49
VRK3-205ENST00000593919 CDH10Q9Y6N8 788 aa11.98□□□□□ -0.49
VRK3-205ENST00000593919 MGAQ8IWI9 3026 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 TRAV27A0A087WT01 109 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 ARGFXA6NJG6 315 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 LRRN3E7EW58 273 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 G3V3Y1 287 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 MYL12BO14950 172 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 SULT1C4O75897 302 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 RAB36O95755 333 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 CH25HO95992 272 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 F10P00742 488 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 OCM2P0CE71 109 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 OCMP0CE72 109 aaPredicted RBP11.97□□□□□ -0.49
VRK3-205ENST00000593919 CXCR1P25024 350 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 CYB561P49447 251 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 POLR2HP52434 150 aaKnown RBP11.97□□□□□ -0.49
VRK3-205ENST00000593919 SPHARQ15513 63 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 ABHD17BQ5VST6 288 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 ATCAYQ86WG3 371 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 ZNF227Q86WZ6 799 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 GALNT16Q8N428 558 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 CLDN22Q8N7P3 220 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 OR2M3Q8NG83 312 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 TMEM163Q8TC26 289 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 THAP4Q8WY91 577 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 TMEM234Q8WY98 164 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 ST8SIA1Q92185 356 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 NTNG2Q96CW9 530 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 SGTBQ96EQ0 304 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 COX4I2Q96KJ9 171 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 TAPBPLQ9BX59 468 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 OR52D1Q9H346 318 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 HHATLQ9HCP6 504 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 MED17Q9NVC6 651 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 SIGLEC7Q9Y286 467 aa11.97□□□□□ -0.49
VRK3-205ENST00000593919 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.96□□□□□ -0.49
VRK3-205ENST00000593919 TMED7-TICAM2A0A0A6YYA0 188 aa11.96□□□□□ -0.49
VRK3-205ENST00000593919 SCG5P05408 212 aa11.96□□□□□ -0.49
VRK3-205ENST00000593919 ZNF41P51814 821 aaPredicted RBP11.96□□□□□ -0.49
VRK3-205ENST00000593919 EFNB1P98172 346 aa11.96□□□□□ -0.49
VRK3-205ENST00000593919 OC90Q02509 493 aaPredicted RBP11.96□□□□□ -0.49
VRK3-205ENST00000593919 PLPPR5Q32ZL2 321 aa11.96□□□□□ -0.49
VRK3-205ENST00000593919 TIMM50Q3ZCQ8 353 aa11.96□□□□□ -0.49
VRK3-205ENST00000593919 ALPK2Q86TB3 2170 aa11.96□□□□□ -0.49
VRK3-205ENST00000593919 OAFQ86UD1 273 aa11.96□□□□□ -0.49
VRK3-205ENST00000593919 ADGRG3Q86Y34 549 aa11.96□□□□□ -0.49
VRK3-205ENST00000593919 LRRC17Q8N6Y2 441 aa11.96□□□□□ -0.49
VRK3-205ENST00000593919 NANOGP1Q8N7R0 232 aa11.96□□□□□ -0.49
VRK3-205ENST00000593919 FADS6Q8N9I5 356 aa11.96□□□□□ -0.49
VRK3-205ENST00000593919 PSD4Q8NDX1 1056 aa11.96□□□□□ -0.49
VRK3-205ENST00000593919 OR51A7Q8NH64 312 aa11.96□□□□□ -0.49
VRK3-205ENST00000593919 CHPT1Q8WUD6 406 aa11.96□□□□□ -0.49
VRK3-205ENST00000593919 OSTF1Q92882 214 aa11.96□□□□□ -0.49
VRK3-205ENST00000593919 FGF11Q92914 225 aa11.96□□□□□ -0.49
VRK3-205ENST00000593919 KTI12Q96EK9 354 aaPredicted RBP11.96□□□□□ -0.49
VRK3-205ENST00000593919 DACH2Q96NX9 599 aa11.96□□□□□ -0.49
VRK3-205ENST00000593919 SLC38A2Q96QD8 506 aa11.96□□□□□ -0.49
VRK3-205ENST00000593919 EXOSC4Q9NPD3 245 aaKnown RBP11.96□□□□□ -0.49
VRK3-205ENST00000593919 DAPK2Q9UIK4 370 aa11.96□□□□□ -0.49
VRK3-205ENST00000593919 TMED7Q9Y3B3 224 aa11.96□□□□□ -0.49
VRK3-205ENST00000593919 ETV2O00321 342 aaPredicted RBP11.96□□□□□ -0.5
VRK3-205ENST00000593919 SUSD5O60279 629 aa11.96□□□□□ -0.5
VRK3-205ENST00000593919 GPX5O75715 221 aa11.96□□□□□ -0.5
VRK3-205ENST00000593919 IGF2P01344 180 aa11.96□□□□□ -0.5
VRK3-205ENST00000593919 HTR3AP46098 478 aa11.96□□□□□ -0.5
VRK3-205ENST00000593919 ETV1P50549 477 aa11.96□□□□□ -0.5
VRK3-205ENST00000593919 FOXF1Q12946 379 aa11.96□□□□□ -0.5
VRK3-205ENST00000593919 FHL1Q13642 323 aa11.96□□□□□ -0.5
VRK3-205ENST00000593919 SLC25A30Q5SVS4 291 aa11.96□□□□□ -0.5
VRK3-205ENST00000593919 C19orf48Q6RUI8 117 aa11.96□□□□□ -0.5
VRK3-205ENST00000593919 PLCZ1Q86YW0 608 aa11.96□□□□□ -0.5
VRK3-205ENST00000593919 GPALPP1Q8IXQ4 340 aa11.96□□□□□ -0.5
VRK3-205ENST00000593919 OR4K17Q8NGC6 315 aa11.96□□□□□ -0.5
VRK3-205ENST00000593919 OR4Q3Q8NH05 313 aa11.96□□□□□ -0.5
VRK3-205ENST00000593919 RNFT2Q96EX2 444 aa11.96□□□□□ -0.5
VRK3-205ENST00000593919 SAMD8Q96LT4 415 aa11.96□□□□□ -0.5
VRK3-205ENST00000593919 SCNM1Q9BWG6 230 aa11.96□□□□□ -0.5
VRK3-205ENST00000593919 ENKD1Q9H0I2 346 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms