RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 RHEBL1Q8TAI7 183 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 ING5Q8WYH8 240 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 ELMO1Q92556 727 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 P2RX5Q93086 422 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 CERS2Q96G23 380 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 ZNF274Q96GC6 653 aaPredicted RBP4.09□□□□□ -1.75
SMAD4-216ENST00000593223 CASD1Q96PB1 797 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 CBWD1Q9BRT8 395 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 WRAP53Q9BUR4 548 aaKnown RBP4.09□□□□□ -1.75
SMAD4-216ENST00000593223 LRRC61Q9BV99 259 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 ROGDIQ9GZN7 287 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 DRC3Q9H069 523 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 ELOVL6Q9H5J4 265 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 DHX33Q9H6R0 707 aaKnown RBP4.09□□□□□ -1.75
SMAD4-216ENST00000593223 MTHFD2LQ9H903 347 aaPredicted RBP4.09□□□□□ -1.75
SMAD4-216ENST00000593223 CCNB1IP1Q9NPC3 277 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 C8orf4Q9NR00 106 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 MRPL17Q9NRX2 175 aaKnown RBP4.09□□□□□ -1.75
SMAD4-216ENST00000593223 ELOVL2Q9NXB9 296 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 PIPOXQ9P0Z9 390 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 APOBEC3BQ9UH17 382 aaKnown RBP4.09□□□□□ -1.75
SMAD4-216ENST00000593223 BCAP29Q9UHQ4 241 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 ZNF490Q9ULM2 529 aaPredicted RBP4.09□□□□□ -1.75
SMAD4-216ENST00000593223 TIMM22Q9Y584 194 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 HEG1Q9ULI3 1381 aa4.09□□□□□ -1.75
SMAD4-216ENST00000593223 TEX15Q9BXT5 2789 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 PPIAL4EA0A075B759 164 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 A0A0A6YYH2 397 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 LOC390937A0A1W2PQ73 354 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 RAB19A4D1S5 217 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 A6NJ64 397 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 GOLGA8JA6NMD2 632 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 TMEM150CB9EJG8 249 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 E7ESA3 106 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 NPIPA2E9PIF3 369 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 FBP2O00757 339 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 CHEK1O14757 476 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 SURF4O15260 269 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 STX7O15400 261 aaKnown RBP4.08□□□□□ -1.76
SMAD4-216ENST00000593223 COCHO43405 550 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 IDH3BO43837 385 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 TIMM8AO60220 97 aaPredicted RBP4.08□□□□□ -1.76
SMAD4-216ENST00000593223 NDUFS6O75380 124 aaKnown RBP4.08□□□□□ -1.76
SMAD4-216ENST00000593223 CRLF1O75462 422 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 GMNNO75496 209 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 NOL4O94818 638 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 OR2F2O95006 317 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 SYNGR4O95473 234 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 MT-ND2P03891 347 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 SERPINA6P08185 405 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 KRT7P08729 469 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 PNMA6AP0CW24 399 aaPredicted RBP4.08□□□□□ -1.76
SMAD4-216ENST00000593223 PPIAL4FP0DN26 164 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 MLNP12872 115 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 GSTM3P21266 225 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 IL12BP29460 328 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 OXTRP30559 389 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 TAF6P49848 677 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 CEBPGP53567 150 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 S100A12P80511 92 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 IL10RBQ08334 325 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 CDH17Q12864 832 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 ELAVL2Q12926 359 aaKnown RBP4.08□□□□□ -1.76
SMAD4-216ENST00000593223 STX5Q13190 355 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 ITPR1Q14643 2758 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 MESDQ14696 234 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 FAM189A2Q15884 450 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 C18orf21Q32NC0 220 aaPredicted RBP4.08□□□□□ -1.76
SMAD4-216ENST00000593223 SBK1Q52WX2 424 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 CDKL4Q5MAI5 379 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 FAM46CQ5VWP2 391 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 MFSD14CQ5VZR4 134 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 ZNF470Q6ECI4 717 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 FAM166AQ6J272 317 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 RHBDD2Q6NTF9 364 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 H3F3CQ6NXT2 135 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 BTNL8Q6UX41 500 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 CYP4V2Q6ZWL3 525 aaPredicted RBP4.08□□□□□ -1.76
SMAD4-216ENST00000593223 SLC35D2Q76EJ3 337 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 SLC22A16Q86VW1 577 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 APCDD1Q8J025 514 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 FAM86B1Q8N7N1 296 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 ZNF680Q8NEM1 530 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 TTLQ8NG68 377 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 TEX47Q8TBZ9 253 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 TCP11Q8WWU5 503 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 PIGCQ92535 297 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 SLC35B4Q969S0 331 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 MCHR2Q969V1 340 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 SLC25A36Q96CQ1 311 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 OTUB2Q96DC9 234 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 SERAC1Q96JX3 654 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 ZNF514Q96K75 400 aaPredicted RBP4.08□□□□□ -1.76
SMAD4-216ENST00000593223 CEP19Q96LK0 163 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 GPR137Q96N19 417 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 AGAP4Q96P64 663 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 TECTBQ96PL2 329 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 NEDD4LQ96PU5 975 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 TUBGCP2Q9BSJ2 902 aa4.08□□□□□ -1.76
SMAD4-216ENST00000593223 C20orf24Q9BUV8 137 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms