RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	GKN3P	P0CG01	181 aa		15.82	■□□□□ 0.12
CIRBP-238	ENST00000592412	APEX1	P27695	318 aa	Known RBP	15.82	■□□□□ 0.12
CIRBP-238	ENST00000592412	CDKN2C	P42773	168 aa		15.82	■□□□□ 0.12
CIRBP-238	ENST00000592412	CHN2	P52757	468 aa		15.82	■□□□□ 0.12
CIRBP-238	ENST00000592412	CDH15	P55291	814 aa		15.82	■□□□□ 0.12
CIRBP-238	ENST00000592412	UBE2N	P61088	152 aa	Known RBP	15.82	■□□□□ 0.12
CIRBP-238	ENST00000592412	RUNX1T1	Q06455	604 aa		15.82	■□□□□ 0.12
CIRBP-238	ENST00000592412	COX20	Q5RI15	118 aa		15.82	■□□□□ 0.12
CIRBP-238	ENST00000592412	SVOPL	Q8N434	492 aa		15.82	■□□□□ 0.12
CIRBP-238	ENST00000592412	FAM169B	Q8N8A8	192 aa		15.82	■□□□□ 0.12
CIRBP-238	ENST00000592412	LINC01356	Q8N9X3	169 aa		15.82	■□□□□ 0.12
CIRBP-238	ENST00000592412	HPS1	Q92902	700 aa		15.82	■□□□□ 0.12
CIRBP-238	ENST00000592412	PKNOX2	Q96KN3	472 aa		15.82	■□□□□ 0.12
CIRBP-238	ENST00000592412	PLA2G12A	Q9BZM1	189 aa		15.82	■□□□□ 0.12
CIRBP-238	ENST00000592412	RAB1B	Q9H0U4	201 aa		15.82	■□□□□ 0.12
CIRBP-238	ENST00000592412	ZNF442	Q9H7R0	627 aa		15.82	■□□□□ 0.12
CIRBP-238	ENST00000592412	ADPRHL2	Q9NX46	363 aa		15.82	■□□□□ 0.12
CIRBP-238	ENST00000592412	CDHR4	A6H8M9	788 aa		15.81	■□□□□ 0.12
CIRBP-238	ENST00000592412	TMEM229A	B2RXF0	380 aa		15.81	■□□□□ 0.12
CIRBP-238	ENST00000592412	LYNX1	G3V0Z9	82 aa		15.81	■□□□□ 0.12
CIRBP-238	ENST00000592412	TYROBP	O43914	113 aa		15.81	■□□□□ 0.12
CIRBP-238	ENST00000592412	KRT33A	O76009	404 aa		15.81	■□□□□ 0.12
CIRBP-238	ENST00000592412	LYNX1	P0DP58	116 aa		15.81	■□□□□ 0.12
CIRBP-238	ENST00000592412	IL7R	P16871	459 aa		15.81	■□□□□ 0.12
CIRBP-238	ENST00000592412	CXCR1	P25024	350 aa		15.81	■□□□□ 0.12
CIRBP-238	ENST00000592412	CFP	P27918	469 aa		15.81	■□□□□ 0.12
CIRBP-238	ENST00000592412	GSTA3	Q16772	222 aa		15.81	■□□□□ 0.12
CIRBP-238	ENST00000592412	FAM174B	Q3ZCQ3	159 aa		15.81	■□□□□ 0.12
CIRBP-238	ENST00000592412	TMEM225	Q6GV28	225 aa		15.81	■□□□□ 0.12
CIRBP-238	ENST00000592412	NIPAL3	Q6P499	406 aa		15.81	■□□□□ 0.12
CIRBP-238	ENST00000592412	ZNF836	Q6ZNA1	936 aa		15.81	■□□□□ 0.12
CIRBP-238	ENST00000592412	CDK20	Q8IZL9	346 aa		15.81	■□□□□ 0.12
CIRBP-238	ENST00000592412	ZNF786	Q8N393	782 aa		15.81	■□□□□ 0.12
CIRBP-238	ENST00000592412	RIBC1	Q8N443	379 aa	Predicted RBP	15.81	■□□□□ 0.12
CIRBP-238	ENST00000592412	OR4F15	Q8NGB8	312 aa		15.81	■□□□□ 0.12
CIRBP-238	ENST00000592412	ZNF317	Q96PQ6	595 aa	Predicted RBP	15.81	■□□□□ 0.12
CIRBP-238	ENST00000592412	MTHFD2L	Q9H903	347 aa	Predicted RBP	15.81	■□□□□ 0.12
CIRBP-238	ENST00000592412	BTNL2	Q9UIR0	455 aa		15.81	■□□□□ 0.12
CIRBP-238	ENST00000592412	CHST2	Q9Y4C5	530 aa		15.81	■□□□□ 0.12
CIRBP-238	ENST00000592412	DSPP	Q9NZW4	1301 aa		15.8	■□□□□ 0.12
CIRBP-238	ENST00000592412	IGHV2OR16-5	A0A0B4J2B6	119 aa		15.8	■□□□□ 0.12
CIRBP-238	ENST00000592412	ZNF432	O94892	652 aa		15.8	■□□□□ 0.12
CIRBP-238	ENST00000592412	VENTX	O95231	258 aa		15.8	■□□□□ 0.12
CIRBP-238	ENST00000592412	DBI	P07108	87 aa	Known RBP	15.8	■□□□□ 0.12
CIRBP-238	ENST00000592412	PRG2	P13727	222 aa		15.8	■□□□□ 0.12
CIRBP-238	ENST00000592412	NPR2	P20594	1047 aa		15.8	■□□□□ 0.12
CIRBP-238	ENST00000592412	PAX7	P23759	505 aa		15.8	■□□□□ 0.12
CIRBP-238	ENST00000592412	IL12A	P29459	219 aa		15.8	■□□□□ 0.12
CIRBP-238	ENST00000592412	SRP14	P37108	136 aa	Known RBP	15.8	■□□□□ 0.12
CIRBP-238	ENST00000592412	MSMP	Q1L6U9	139 aa		15.8	■□□□□ 0.12
CIRBP-238	ENST00000592412	VRK2	Q86Y07	508 aa		15.8	■□□□□ 0.12
CIRBP-238	ENST00000592412	VPS37A	Q8NEZ2	397 aa		15.8	■□□□□ 0.12
CIRBP-238	ENST00000592412	SEMA6D	Q8NFY4	1073 aa		15.8	■□□□□ 0.12
CIRBP-238	ENST00000592412	NEU4	Q8WWR8	484 aa	Predicted RBP	15.8	■□□□□ 0.12
CIRBP-238	ENST00000592412	ZNF837	Q96EG3	531 aa	Predicted RBP	15.8	■□□□□ 0.12
CIRBP-238	ENST00000592412	LINC00470	Q9BZP3	86 aa		15.8	■□□□□ 0.12
CIRBP-238	ENST00000592412	CCDC154	A6NI56	674 aa		15.79	■□□□□ 0.12
CIRBP-238	ENST00000592412		A8MVM7	634 aa		15.79	■□□□□ 0.12
CIRBP-238	ENST00000592412	FTCDNL1	E5RQL4	147 aa		15.79	■□□□□ 0.12
CIRBP-238	ENST00000592412		E9PBE3	544 aa		15.79	■□□□□ 0.12
CIRBP-238	ENST00000592412	RPL36A-HNRNPH2	H7BZ11	118 aa		15.79	■□□□□ 0.12
CIRBP-238	ENST00000592412	VAMP5	O95183	116 aa		15.79	■□□□□ 0.12
CIRBP-238	ENST00000592412	ALDOC	P09972	364 aa	Known RBP	15.79	■□□□□ 0.12
CIRBP-238	ENST00000592412	UQCRB	P14927	111 aa		15.79	■□□□□ 0.12
CIRBP-238	ENST00000592412	CBR1	P16152	277 aa		15.79	■□□□□ 0.12
CIRBP-238	ENST00000592412	MVD	P53602	400 aa		15.79	■□□□□ 0.12
CIRBP-238	ENST00000592412	ARF1	P84077	181 aa	Known RBP	15.79	■□□□□ 0.12
CIRBP-238	ENST00000592412	ROR2	Q01974	943 aa	Known RBP	15.79	■□□□□ 0.12
CIRBP-238	ENST00000592412	CCNI	Q14094	377 aa		15.79	■□□□□ 0.12
CIRBP-238	ENST00000592412	DPY19L1	Q2PZI1	675 aa		15.79	■□□□□ 0.12
CIRBP-238	ENST00000592412	C1orf140	Q5VVS0	124 aa		15.79	■□□□□ 0.12
CIRBP-238	ENST00000592412	PRAMEF8	Q5VWM4	474 aa		15.79	■□□□□ 0.12
CIRBP-238	ENST00000592412	PRAMEF7	Q5VXH5	474 aa		15.79	■□□□□ 0.12
CIRBP-238	ENST00000592412	RINL	Q6ZS11	566 aa		15.79	■□□□□ 0.12
CIRBP-238	ENST00000592412	SPATA21	Q7Z572	469 aa		15.79	■□□□□ 0.12
CIRBP-238	ENST00000592412	KDM8	Q8N371	416 aa		15.79	■□□□□ 0.12
CIRBP-238	ENST00000592412	PNPT1	Q8TCS8	783 aa	Known RBP	15.79	■□□□□ 0.12
CIRBP-238	ENST00000592412	SORT1	Q99523	831 aa		15.79	■□□□□ 0.12
CIRBP-238	ENST00000592412	PTDSS2	Q9BVG9	487 aa		15.79	■□□□□ 0.12
CIRBP-238	ENST00000592412	SEC14L4	Q9UDX3	406 aa		15.79	■□□□□ 0.12
CIRBP-238	ENST00000592412	TRRAP	Q9Y4A5	3859 aa		15.78	■□□□□ 0.12
CIRBP-238	ENST00000592412	SH3PXD2B	A1X283	911 aa		15.78	■□□□□ 0.12
CIRBP-238	ENST00000592412	OR6C65	A6NJZ3	312 aa		15.78	■□□□□ 0.12
CIRBP-238	ENST00000592412	SNUPN	O95149	360 aa	Known RBP	15.78	■□□□□ 0.12
CIRBP-238	ENST00000592412	GSN	P06396	782 aa		15.78	■□□□□ 0.12
CIRBP-238	ENST00000592412	TFPT	P0C1Z6	253 aa		15.78	■□□□□ 0.12
CIRBP-238	ENST00000592412	HOXB1	P14653	301 aa	Predicted RBP	15.78	■□□□□ 0.12
CIRBP-238	ENST00000592412	CLNS1A	P54105	237 aa	Known RBP	15.78	■□□□□ 0.12
CIRBP-238	ENST00000592412	DVL1P1	P54792	670 aa	Predicted RBP	15.78	■□□□□ 0.12
CIRBP-238	ENST00000592412	NME5	P56597	212 aa		15.78	■□□□□ 0.12
CIRBP-238	ENST00000592412	UFM1	P61960	85 aa		15.78	■□□□□ 0.12
CIRBP-238	ENST00000592412	GNA13	Q14344	377 aa		15.78	■□□□□ 0.12
CIRBP-238	ENST00000592412	ADRM1	Q16186	407 aa		15.78	■□□□□ 0.12
CIRBP-238	ENST00000592412	WBP2NL	Q6ICG8	309 aa		15.78	■□□□□ 0.12
CIRBP-238	ENST00000592412	NUDCD3	Q8IVD9	361 aa		15.78	■□□□□ 0.12
CIRBP-238	ENST00000592412	ZNF440	Q8IYI8	595 aa		15.78	■□□□□ 0.12
CIRBP-238	ENST00000592412	CLIP4	Q8N3C7	705 aa		15.78	■□□□□ 0.12
CIRBP-238	ENST00000592412	CADM2	Q8N3J6	435 aa		15.78	■□□□□ 0.12
CIRBP-238	ENST00000592412	UBASH3B	Q8TF42	649 aa		15.78	■□□□□ 0.12
CIRBP-238	ENST00000592412	TAPBPL	Q9BX59	468 aa		15.78	■□□□□ 0.12

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