RNA–Protein interactions for RNA: ENST00000591055.5

CIRBP-230, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-230ENST00000591055 CARTPTQ16568 116 aa13.72□□□□□ -0.21
CIRBP-230ENST00000591055 C1orf140Q5VVS0 124 aa13.72□□□□□ -0.21
CIRBP-230ENST00000591055 CREB3L2Q70SY1 520 aa13.72□□□□□ -0.21
CIRBP-230ENST00000591055 SLC46A3Q7Z3Q1 461 aa13.72□□□□□ -0.21
CIRBP-230ENST00000591055 BCL2L2Q92843 193 aaPredicted RBP13.72□□□□□ -0.21
CIRBP-230ENST00000591055 VRK1Q99986 396 aaPredicted RBP13.72□□□□□ -0.21
CIRBP-230ENST00000591055 KATNB1Q9BVA0 655 aa13.72□□□□□ -0.21
CIRBP-230ENST00000591055 WDR55Q9H6Y2 383 aaPredicted RBP13.72□□□□□ -0.21
CIRBP-230ENST00000591055 CACYBPQ9HB71 228 aaKnown RBP13.72□□□□□ -0.21
CIRBP-230ENST00000591055 KCNS2Q9ULS6 477 aa13.72□□□□□ -0.21
CIRBP-230ENST00000591055 ZNF443Q9Y2A4 671 aaPredicted RBP13.72□□□□□ -0.21
CIRBP-230ENST00000591055 DSPPQ9NZW4 1301 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 A0A096LPI6 279 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 TRPC5OSA6NMA1 111 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 HDAC3O15379 428 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 ANP32DO95626 131 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 IL6P05231 212 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 BCHEP06276 602 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 TFPTP0C1Z6 253 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 ETFAP13804 333 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 NR4A2P43354 598 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 DSTNP60981 165 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 ZSWIM7Q19AV6 140 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 RNF220Q5VTB9 566 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 HHATQ5VTY9 493 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 PRAMEF8Q5VWM4 474 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 PRAMEF7Q5VXH5 474 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 NXNQ6DKJ4 435 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 FAM166AQ6J272 317 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 NIPAL3Q6P499 406 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 CLIP4Q8N3C7 705 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 ARIH2OSQ8N7S6 290 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 ALKBH3Q96Q83 286 aaPredicted RBP13.71□□□□□ -0.21
CIRBP-230ENST00000591055 ARMC7Q9H6L4 198 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 CHODLQ9H9P2 273 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 CA10Q9NS85 328 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 SLC6A13Q9NSD5 602 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.71□□□□□ -0.211e-9■□□□□ 8.6
CIRBP-230ENST00000591055 ZNF232Q9UNY5 417 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 RASD1Q9Y272 281 aa13.71□□□□□ -0.21
CIRBP-230ENST00000591055 V9GYY5 206 aaPredicted RBP13.71□□□□□ -0.21
CIRBP-230ENST00000591055 ARPC4-TTLL3A0A0A6YYG9 625 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 LOC100289279A0A1B0GTE1 492 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 LOC390937A0A1W2PQ73 354 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 TMEM247A6NEH6 219 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 B9A039 149 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 NR5A2O00482 541 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 UPK3AO75631 287 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 SLC22A3O75751 556 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 AHSA1O95433 338 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 PRG2P13727 222 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 APEHP13798 732 aaKnown RBP13.7□□□□□ -0.22
CIRBP-230ENST00000591055 IDO1P14902 403 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 SRD5A1P18405 259 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 IGFBP5P24593 272 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 MVDP53602 400 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 TUBA1BP68363 451 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 TUBA4AP68366 448 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 IQCCQ4KMZ1 466 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 PDCD4Q53EL6 469 aaKnown RBP13.7□□□□□ -0.22
CIRBP-230ENST00000591055 TNFAIP8L3Q5GJ75 292 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 CEP85LQ5SZL2 805 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 ANKRD16Q6P6B7 361 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 VHLLQ6RSH7 139 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 TUBA1AQ71U36 451 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 LINGO2Q7L985 606 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 EPHX4Q8IUS5 362 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 ANKS4BQ8N8V4 417 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 ANKRD42Q8N9B4 389 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 MAGEE2Q8TD90 523 aaPredicted RBP13.7□□□□□ -0.22
CIRBP-230ENST00000591055 STK35Q8TDR2 534 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 SLC38A5Q8WUX1 472 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 C3orf49Q96BT1 292 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 ZBTB9Q96C00 473 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 TMEM19Q96HH6 336 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 FOXN4Q96NZ1 517 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 ZNF317Q96PQ6 595 aaPredicted RBP13.7□□□□□ -0.22
CIRBP-230ENST00000591055 SPATA9Q9BWV2 254 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 TPT1P8Q9HAU6 139 aa13.7□□□□□ -0.22
CIRBP-230ENST00000591055 MYOZ1Q9NP98 299 aaPredicted RBP13.7□□□□□ -0.22
CIRBP-230ENST00000591055 A0A096LPE4 126 aa13.69□□□□□ -0.22
CIRBP-230ENST00000591055 A0A0G2JPF8 293 aa13.69□□□□□ -0.22
CIRBP-230ENST00000591055 A0A1W2PPZ6 126 aa13.69□□□□□ -0.22
CIRBP-230ENST00000591055 TMEM229AB2RXF0 380 aa13.69□□□□□ -0.22
CIRBP-230ENST00000591055 HNRNPCL2B2RXH8 293 aa13.69□□□□□ -0.22
CIRBP-230ENST00000591055 HNRNPCL3B7ZW38 293 aa13.69□□□□□ -0.22
CIRBP-230ENST00000591055 HNRNPCL1O60812 293 aaKnown RBP13.69□□□□□ -0.22
CIRBP-230ENST00000591055 NPIPB7O75200 414 aa13.69□□□□□ -0.22
CIRBP-230ENST00000591055 PDE5AO76074 875 aa13.69□□□□□ -0.22
CIRBP-230ENST00000591055 OR4A8P0C604 315 aa13.69□□□□□ -0.22
CIRBP-230ENST00000591055 CECR9P0C854 216 aa13.69□□□□□ -0.22
CIRBP-230ENST00000591055 ZCCHC18P0CG32 403 aa13.69□□□□□ -0.22
CIRBP-230ENST00000591055 HNRNPCL4P0DMR1 293 aa13.69□□□□□ -0.22
CIRBP-230ENST00000591055 KITP10721 976 aa13.69□□□□□ -0.22
CIRBP-230ENST00000591055 THBS2P35442 1172 aa13.69□□□□□ -0.22
CIRBP-230ENST00000591055 SH3BGRP55822 239 aaPredicted RBP13.69□□□□□ -0.22
CIRBP-230ENST00000591055 NAAAQ02083 359 aa13.69□□□□□ -0.22
CIRBP-230ENST00000591055 ADIPOQQ15848 244 aa13.69□□□□□ -0.22
CIRBP-230ENST00000591055 KRTAP24-1Q3LI83 254 aa13.69□□□□□ -0.22
CIRBP-230ENST00000591055 C3orf36Q3SXR2 165 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms