RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 ZNF775Q96BV0 537 aaPredicted RBP10.55□□□□□ -0.72
LIG3-213ENST00000590630 SLC25A36Q96CQ1 311 aa10.55□□□□□ -0.72
LIG3-213ENST00000590630 MED18Q9BUE0 208 aa10.55□□□□□ -0.72
LIG3-213ENST00000590630 ZNF426Q9BUY5 554 aa10.55□□□□□ -0.72
LIG3-213ENST00000590630 HDHD5Q9BXW7 423 aa10.55□□□□□ -0.72
LIG3-213ENST00000590630 SLC19A3Q9BZV2 496 aa10.55□□□□□ -0.72
LIG3-213ENST00000590630 KLHL4Q9C0H6 718 aa10.55□□□□□ -0.72
LIG3-213ENST00000590630 OR10A4Q9H209 315 aa10.55□□□□□ -0.72
LIG3-213ENST00000590630 PARPBPQ9NWS1 579 aa10.55□□□□□ -0.72
LIG3-213ENST00000590630 C6orf203Q9P0P8 240 aaPredicted RBP10.55□□□□□ -0.72
LIG3-213ENST00000590630 RPS6KA6Q9UK32 745 aa10.55□□□□□ -0.72
LIG3-213ENST00000590630 RASD1Q9Y272 281 aa10.55□□□□□ -0.72
LIG3-213ENST00000590630 B3GALT5Q9Y2C3 310 aa10.55□□□□□ -0.72
LIG3-213ENST00000590630 GPR52Q9Y2T5 361 aa10.55□□□□□ -0.72
LIG3-213ENST00000590630 TESMINQ9Y4I5 508 aa10.55□□□□□ -0.72
LIG3-213ENST00000590630 CORINQ9Y5Q5 1042 aa10.55□□□□□ -0.72
LIG3-213ENST00000590630 FLVCR1Q9Y5Y0 555 aa10.55□□□□□ -0.72
LIG3-213ENST00000590630 CSMD1Q96PZ7 3565 aa10.55□□□□□ -0.72
LIG3-213ENST00000590630 AKAP6Q13023 2319 aa10.55□□□□□ -0.72
LIG3-213ENST00000590630 A6NNC1 897 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 MRPL33O75394 65 aaKnown RBP10.54□□□□□ -0.72
LIG3-213ENST00000590630 LYPD3O95274 346 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 ZNF682O95780 498 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 MT-ATP6P00846 226 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 SERPINA1P01009 418 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 THY1P04216 161 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 IFNW1P05000 195 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 THRBP10828 461 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 CALB2P22676 271 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 SLC25A3Q00325 362 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 POU4F3Q15319 338 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 FXNQ16595 210 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 PRR14LQ5THK1 2151 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 TTC33Q6PID6 262 aaPredicted RBP10.54□□□□□ -0.72
LIG3-213ENST00000590630 WDR88Q6ZMY6 472 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 H1FNTQ75WM6 255 aaPredicted RBP10.54□□□□□ -0.72
LIG3-213ENST00000590630 VTCN1Q7Z7D3 282 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 P3H2Q8IVL5 708 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 DEFB107AQ8IZN7 70 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 RNF148Q8N7C7 305 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 SCAIQ8N9R8 606 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 ADPRHL1Q8NDY3 354 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 STEAP2Q8NFT2 490 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 TMEM45BQ96B21 275 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 SLC41A3Q96GZ6 507 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 NSL1Q96IY1 281 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 CDRT15Q96T59 188 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 ZNF226Q9NYT6 803 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 EGFL7Q9UHF1 273 aa10.54□□□□□ -0.72
LIG3-213ENST00000590630 LOC102725191A0A1B0GVB3 256 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 FAM221AA4D161 298 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 B2RBV5 119 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 M0R082 166 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 CASKO14936 926 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 CTAG2O75638 210 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 ADAP00813 363 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 BGLAPP02818 100 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 NCK1P16333 377 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 GRPRP30550 384 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 IFNA8P32881 189 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 NTF4P34130 210 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 RBM34P42696 430 aaKnown RBP10.53□□□□□ -0.72
LIG3-213ENST00000590630 ITGADQ13349 1161 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 PIN1Q13526 163 aaPredicted RBP10.53□□□□□ -0.72
LIG3-213ENST00000590630 IFI44LQ53G44 452 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 SFRP5Q5T4F7 317 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 FBXW9Q5XUX1 488 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 GLYATQ6IB77 296 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 CASP12Q6UXS9 341 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 CREB3L2Q70SY1 520 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 FKBP9P1Q75LS8 142 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 TMEM200AQ86VY9 491 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 CXorf67Q86X51 503 aaPredicted RBP10.53□□□□□ -0.72
LIG3-213ENST00000590630 ARHGAP24Q8N264 748 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 ZNF417Q8TAU3 575 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 KISS1RQ969F8 398 aaPredicted RBP10.53□□□□□ -0.72
LIG3-213ENST00000590630 HSH2DQ96JZ2 352 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 PRRC1Q96M27 445 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 WFIKKN1Q96NZ8 548 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 ZNF587Q96SQ5 575 aaPredicted RBP10.53□□□□□ -0.72
LIG3-213ENST00000590630 USB1Q9BQ65 265 aaKnown RBP10.53□□□□□ -0.72
LIG3-213ENST00000590630 ASPNQ9BXN1 380 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 GORASP2Q9H8Y8 452 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 MALT1Q9UDY8 824 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 CD300AQ9UGN4 299 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 PRSS50Q9UI38 385 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 MAGEL2Q9UJ55 1249 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 RIMS3Q9UJD0 308 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 SAMD4AQ9UPU9 718 aaKnown RBP10.53□□□□□ -0.72
LIG3-213ENST00000590630 ALPK2Q86TB3 2170 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 CREBBPQ92793 2442 aa10.53□□□□□ -0.72
LIG3-213ENST00000590630 OR6C65A6NJZ3 312 aa10.52□□□□□ -0.73
LIG3-213ENST00000590630 IGF2P01344 180 aa10.52□□□□□ -0.73
LIG3-213ENST00000590630 NQO1P15559 274 aaKnown RBP10.52□□□□□ -0.73
LIG3-213ENST00000590630 ZNF43P17038 809 aa10.52□□□□□ -0.73
LIG3-213ENST00000590630 TCN1P20061 433 aaPredicted RBP10.52□□□□□ -0.73
LIG3-213ENST00000590630 COX5AP20674 150 aa10.52□□□□□ -0.73
LIG3-213ENST00000590630 PTNP21246 168 aa10.52□□□□□ -0.73
LIG3-213ENST00000590630 IL32P24001 234 aa10.52□□□□□ -0.73
LIG3-213ENST00000590630 EDNRAP25101 427 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms