RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 SERPINA3P01011 423 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 CD1AP06126 327 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 FOLR1P15328 257 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 MYL9P24844 172 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 RPL4P36578 427 aaKnown RBP9.08□□□□□ -0.96
VPS25-202ENST00000589219 DUSP3P51452 185 aaPredicted RBP9.08□□□□□ -0.96
VPS25-202ENST00000589219 CCR4P51679 360 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 SLC16A1P53985 500 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 MXD1Q05195 221 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 PLCXD2Q0VAA5 305 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 DNASE1L3Q13609 305 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 RTP5Q14D33 572 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 CD226Q15762 336 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 ZNF74Q16587 644 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 SNAP47Q5SQN1 464 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 ZNF362Q5T0B9 420 aaPredicted RBP9.08□□□□□ -0.96
VPS25-202ENST00000589219 RHBDD2Q6NTF9 364 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 TMEM71Q6P5X7 295 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 XKRXQ6PP77 449 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 METAP1DQ6UB28 335 aaPredicted RBP9.08□□□□□ -0.96
VPS25-202ENST00000589219 GDPD1Q8N9F7 314 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 Q8N9G6 341 aaPredicted RBP9.08□□□□□ -0.96
VPS25-202ENST00000589219 SYT14Q8NB59 555 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 FAM83FQ8NEG4 500 aaPredicted RBP9.08□□□□□ -0.96
VPS25-202ENST00000589219 SDR9C7Q8NEX9 313 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 OR52E2Q8NGJ4 325 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 OR5M3Q8NGP4 307 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 OR1N1Q8NGS0 311 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 NEIL3Q8TAT5 605 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.08□□□□□ -0.96
VPS25-202ENST00000589219 SMPDL3BQ92485 455 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 PTP4A1Q93096 173 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 GAL3ST4Q96RP7 486 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 LMF1Q96S06 567 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 NUDT9Q9BW91 350 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 TGIF2Q9GZN2 237 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 SRRQ9GZT4 340 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 WWTR1Q9GZV5 400 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 NRIP3Q9NQ35 241 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 FGF21Q9NSA1 209 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 QPCTLQ9NXS2 382 aa9.08□□□□□ -0.96
VPS25-202ENST00000589219 IGLV3-12A0A075B6K2 115 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 ZC3H12DA2A288 527 aaKnown RBP9.07□□□□□ -0.96
VPS25-202ENST00000589219 OR2W5A6NFC9 320 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 A8MUA0 341 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 ALG1L2C9J202 215 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 PLPP2O43688 288 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 TSPAN2O60636 221 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 SLC19A2O60779 497 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 ICOSLGO75144 302 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 REM1O75628 298 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 TXNDC12O95881 172 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 GP1BAP07359 652 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 CYC1P08574 325 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 MRPL3P09001 348 aaKnown RBP9.07□□□□□ -0.96
VPS25-202ENST00000589219 CLEC2LP0C7M8 214 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 OR2T7P0C7T2 308 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 HIST1H1CP16403 213 aaKnown RBP9.07□□□□□ -0.96
VPS25-202ENST00000589219 GTF2E2P29084 291 aaKnown RBP9.07□□□□□ -0.96
VPS25-202ENST00000589219 SLC25A1P53007 311 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 PNLIPRP2P54317 469 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 INSM1Q01101 510 aaPredicted RBP9.07□□□□□ -0.96
VPS25-202ENST00000589219 ZNF85Q03923 595 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 NSDHLQ15738 373 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 CLPPQ16740 277 aaPredicted RBP9.07□□□□□ -0.96
VPS25-202ENST00000589219 GLYR1Q49A26 553 aaPredicted RBP9.07□□□□□ -0.96
VPS25-202ENST00000589219 EMC4Q5J8M3 183 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 FCRLBQ6BAA4 426 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 FAAH2Q6GMR7 532 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 FAM131AQ6UXB0 335 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 PAMR1Q6UXH9 720 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 VASH1Q7L8A9 365 aaPredicted RBP9.07□□□□□ -0.96
VPS25-202ENST00000589219 JAZF1Q86VZ6 243 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 EGFL6Q8IUX8 553 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 MISPQ8IVT2 679 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 C9orf40Q8IXQ3 194 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 SLC35F2Q8IXU6 374 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 ZNF321PQ8N8H1 164 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 ZNF441Q8N8Z8 693 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 GATSQ8NAP1 163 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 CYB561A3Q8NBI2 242 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 OR2T27Q8NH04 317 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 OR4K13Q8NH42 304 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 OR5W2Q8NH69 310 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 ZNF563Q8TA94 476 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 HAVCR2Q8TDQ0 301 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 KCTD12Q96CX2 325 aaKnown RBP9.07□□□□□ -0.96
VPS25-202ENST00000589219 ARSGQ96EG1 525 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 C4orf36Q96KX1 117 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 HS3ST6Q96QI5 342 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 TBX5Q99593 518 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 SDHCQ99643 169 aaPredicted RBP9.07□□□□□ -0.96
VPS25-202ENST00000589219 NEURL2Q9BR09 285 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 MFRPQ9BY79 579 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 KRTAP3-3Q9BYR6 98 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 KRTAP3-2Q9BYR7 98 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 VN1R1Q9GZP7 353 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 MIXL1Q9H2W2 232 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 FKRPQ9H9S5 495 aa9.07□□□□□ -0.96
VPS25-202ENST00000589219 ABCB9Q9NP78 766 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms