RNA–Protein interactions for RNA: ENST00000587718.5

CAPNS1-204, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-204ENST00000587718 C12orf10Q9HB07 376 aa23.18■■□□□ 1.3
CAPNS1-204ENST00000587718 BABAM2Q9NXR7 383 aa23.18■■□□□ 1.3
CAPNS1-204ENST00000587718 CCDC182A6NF36 153 aa23.18■■□□□ 1.3
CAPNS1-204ENST00000587718 IL33O95760 270 aa23.18■■□□□ 1.3
CAPNS1-204ENST00000587718 CSTAP01040 98 aa23.18■■□□□ 1.3
CAPNS1-204ENST00000587718 APOA1P02647 267 aa23.18■■□□□ 1.3
CAPNS1-204ENST00000587718 PNMTP11086 282 aa23.18■■□□□ 1.3
CAPNS1-204ENST00000587718 THSD4Q6ZMP0 1018 aa23.18■■□□□ 1.3
CAPNS1-204ENST00000587718 ZNF614Q8N883 585 aa23.18■■□□□ 1.3
CAPNS1-204ENST00000587718 POC5Q8NA72 575 aa23.18■■□□□ 1.3
CAPNS1-204ENST00000587718 OR4N2Q8NGD1 307 aa23.18■■□□□ 1.3
CAPNS1-204ENST00000587718 GRHL3Q8TE85 626 aa23.18■■□□□ 1.3
CAPNS1-204ENST00000587718 SPRYD4Q8WW59 207 aaPredicted RBP23.18■■□□□ 1.3
CAPNS1-204ENST00000587718 KCNN2Q9H2S1 579 aa23.18■■□□□ 1.3
CAPNS1-204ENST00000587718 UBQLN4Q9NRR5 601 aa23.18■■□□□ 1.3
CAPNS1-204ENST00000587718 IGKV3D-11A0A0A0MRZ8 115 aa23.17■■□□□ 1.3
CAPNS1-204ENST00000587718 CDC14CA4D256 554 aa23.17■■□□□ 1.3
CAPNS1-204ENST00000587718 K7EM74 188 aa23.17■■□□□ 1.3
CAPNS1-204ENST00000587718 IFNA16P05015 189 aa23.17■■□□□ 1.3
CAPNS1-204ENST00000587718 FABP5Q01469 135 aa23.17■■□□□ 1.3
CAPNS1-204ENST00000587718 DDI2Q5TDH0 399 aa23.17■■□□□ 1.3
CAPNS1-204ENST00000587718 METAP1DQ6UB28 335 aaPredicted RBP23.17■■□□□ 1.3
CAPNS1-204ENST00000587718 SIRT6Q8N6T7 355 aa23.17■■□□□ 1.3
CAPNS1-204ENST00000587718 ATP6V1C2Q8NEY4 427 aa23.17■■□□□ 1.3
CAPNS1-204ENST00000587718 CHAC2Q8WUX2 184 aa23.17■■□□□ 1.3
CAPNS1-204ENST00000587718 LIPHQ8WWY8 451 aa23.17■■□□□ 1.3
CAPNS1-204ENST00000587718 ASB15Q8WXK1 588 aa23.17■■□□□ 1.3
CAPNS1-204ENST00000587718 PTP4A1Q93096 173 aa23.17■■□□□ 1.3
CAPNS1-204ENST00000587718 TEAD3Q99594 435 aa23.17■■□□□ 1.3
CAPNS1-204ENST00000587718 SPRTNQ9H040 489 aaPredicted RBP23.17■■□□□ 1.3
CAPNS1-204ENST00000587718 MCCC2Q9HCC0 563 aa23.17■■□□□ 1.3
CAPNS1-204ENST00000587718 TRIM36Q9NQ86 728 aa23.17■■□□□ 1.3
CAPNS1-204ENST00000587718 PLEKHB1Q9UF11 243 aaPredicted RBP23.17■■□□□ 1.3
CAPNS1-204ENST00000587718 ZNF229Q9UJW7 825 aa23.17■■□□□ 1.3
CAPNS1-204ENST00000587718 DTX4Q9Y2E6 619 aa23.17■■□□□ 1.3
CAPNS1-204ENST00000587718 UBR5O95071 2799 aaPredicted RBP23.17■■□□□ 1.3
CAPNS1-204ENST00000587718 C12orf71A8MTZ7 269 aa23.16■■□□□ 1.3
CAPNS1-204ENST00000587718 HRKO00198 91 aa23.16■■□□□ 1.3
CAPNS1-204ENST00000587718 ARPC3O15145 178 aa23.16■■□□□ 1.3
CAPNS1-204ENST00000587718 APOL3O95236 402 aa23.16■■□□□ 1.3
CAPNS1-204ENST00000587718 MAOAP21397 527 aa23.16■■□□□ 1.3
CAPNS1-204ENST00000587718 RORAP35398 523 aa23.16■■□□□ 1.3
CAPNS1-204ENST00000587718 CASRP41180 1078 aa23.16■■□□□ 1.3
CAPNS1-204ENST00000587718 RPS18P62269 152 aaKnown RBP23.16■■□□□ 1.3
CAPNS1-204ENST00000587718 FHL1Q13642 323 aa23.16■■□□□ 1.3
CAPNS1-204ENST00000587718 ZNF362Q5T0B9 420 aaPredicted RBP23.16■■□□□ 1.3
CAPNS1-204ENST00000587718 FNDC7Q5VTL7 733 aa23.16■■□□□ 1.3
CAPNS1-204ENST00000587718 LCN10Q6JVE6 187 aa23.16■■□□□ 1.3
CAPNS1-204ENST00000587718 KIRREL2Q6UWL6 708 aa23.16■■□□□ 1.3
CAPNS1-204ENST00000587718 EGFL6Q8IUX8 553 aa23.16■■□□□ 1.3
CAPNS1-204ENST00000587718 OR51G2Q8NGK0 314 aa23.16■■□□□ 1.3
CAPNS1-204ENST00000587718 OR1L3Q8NH93 324 aa23.16■■□□□ 1.3
CAPNS1-204ENST00000587718 TMEM43Q9BTV4 400 aa23.16■■□□□ 1.3
CAPNS1-204ENST00000587718 FARSAQ9Y285 508 aaKnown RBP23.16■■□□□ 1.3
CAPNS1-204ENST00000587718 NOX1Q9Y5S8 564 aa23.16■■□□□ 1.3
CAPNS1-204ENST00000587718 FRG2CA6NGY1 282 aa23.15■■□□□ 1.3
CAPNS1-204ENST00000587718 C17orf105B2RV13 164 aa23.15■■□□□ 1.3
CAPNS1-204ENST00000587718 OR2B3O76000 313 aa23.15■■□□□ 1.3
CAPNS1-204ENST00000587718 MT-ND5P03915 603 aa23.15■■□□□ 1.3
CAPNS1-204ENST00000587718 PPP3R1P63098 170 aa23.15■■□□□ 1.3
CAPNS1-204ENST00000587718 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.15■■□□□ 1.3
CAPNS1-204ENST00000587718 LCN1P1Q5VSP4 162 aa23.15■■□□□ 1.3
CAPNS1-204ENST00000587718 XKRXQ6PP77 449 aa23.15■■□□□ 1.3
CAPNS1-204ENST00000587718 DPY19L2P2Q6ZN68 376 aa23.15■■□□□ 1.3
CAPNS1-204ENST00000587718 SHFQ7M4L6 423 aa23.15■■□□□ 1.3
CAPNS1-204ENST00000587718 GDPD1Q8N9F7 314 aa23.15■■□□□ 1.3
CAPNS1-204ENST00000587718 PTCHD1Q96NR3 888 aa23.15■■□□□ 1.3
CAPNS1-204ENST00000587718 GPX7Q96SL4 187 aaPredicted RBP23.15■■□□□ 1.3
CAPNS1-204ENST00000587718 SDHCQ99643 169 aaPredicted RBP23.15■■□□□ 1.3
CAPNS1-204ENST00000587718 KATNB1Q9BVA0 655 aa23.15■■□□□ 1.3
CAPNS1-204ENST00000587718 ALG8Q9BVK2 526 aa23.15■■□□□ 1.3
CAPNS1-204ENST00000587718 CHRNA9Q9UGM1 479 aa23.15■■□□□ 1.3
CAPNS1-204ENST00000587718 TP53TG5Q9Y2B4 290 aa23.15■■□□□ 1.3
CAPNS1-204ENST00000587718 V9GYH0 126 aa23.15■■□□□ 1.3
CAPNS1-204ENST00000587718 DAPL1A0PJW8 107 aa23.14■■□□□ 1.3
CAPNS1-204ENST00000587718 MEN1O00255 615 aa23.14■■□□□ 1.3
CAPNS1-204ENST00000587718 SBK2P0C263 348 aa23.14■■□□□ 1.3
CAPNS1-204ENST00000587718 SDC2P34741 201 aa23.14■■□□□ 1.3
CAPNS1-204ENST00000587718 RFX3P48380 749 aa23.14■■□□□ 1.3
CAPNS1-204ENST00000587718 SLC37A1P57057 533 aa23.14■■□□□ 1.3
CAPNS1-204ENST00000587718 RPS15P62841 145 aaKnown RBP23.14■■□□□ 1.3
CAPNS1-204ENST00000587718 CRYZQ08257 329 aaKnown RBP23.14■■□□□ 1.3
CAPNS1-204ENST00000587718 LGALS3BPQ08380 585 aa23.14■■□□□ 1.3
CAPNS1-204ENST00000587718 HNRNPA0Q13151 305 aaKnown RBP23.14■■□□□ 1.3
CAPNS1-204ENST00000587718 GGTLC2Q14390 218 aa23.14■■□□□ 1.3
CAPNS1-204ENST00000587718 ELAVL1Q15717 326 aaKnown RBP23.14■■□□□ 1.3
CAPNS1-204ENST00000587718 WBP2NLQ6ICG8 309 aa23.14■■□□□ 1.3
CAPNS1-204ENST00000587718 SNX29P2Q8IUI4 249 aa23.14■■□□□ 1.3
CAPNS1-204ENST00000587718 POMGNT2Q8NAT1 580 aa23.14■■□□□ 1.3
CAPNS1-204ENST00000587718 ACOT12Q8WYK0 555 aa23.14■■□□□ 1.3
CAPNS1-204ENST00000587718 MR1Q95460 341 aa23.14■■□□□ 1.3
CAPNS1-204ENST00000587718 MRPL48Q96GC5 212 aaKnown RBP23.14■■□□□ 1.3
CAPNS1-204ENST00000587718 SENP5Q96HI0 755 aaPredicted RBP23.14■■□□□ 1.3
CAPNS1-204ENST00000587718 TNFRSF13CQ96RJ3 184 aa23.14■■□□□ 1.3
CAPNS1-204ENST00000587718 ENKD1Q9H0I2 346 aa23.14■■□□□ 1.3
CAPNS1-204ENST00000587718 IL20RAQ9UHF4 553 aa23.14■■□□□ 1.3
CAPNS1-204ENST00000587718 ZNF337Q9Y3M9 751 aa23.14■■□□□ 1.3
CAPNS1-204ENST00000587718 RGS5O15539 181 aa23.14■■□□□ 1.29
CAPNS1-204ENST00000587718 SEC14L5O43304 696 aa23.14■■□□□ 1.29
CAPNS1-204ENST00000587718 ADAM11O75078 769 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms