RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 C10orf53Q8N6V4 93 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 NINJ1Q92982 152 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 TMEM45BQ96B21 275 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 CMTM5Q96DZ9 223 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 MYLK2Q9H1R3 596 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 ASB6Q9NWX5 421 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 CMTM6Q9NX76 183 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 UPB1Q9UBR1 384 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 MALT1Q9UDY8 824 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 RASD1Q9Y272 281 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 SH3GLB1Q9Y371 365 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 FREM1Q5H8C1 2179 aa13.1□□□□□ -0.31
ATG4D-207ENST00000587256 A0A1W2PPR1 153 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 CIB4A0PJX0 185 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 M0R082 166 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 CHP2O43745 196 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 RAD51DO75771 328 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 RAF1P04049 648 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 GGT1P19440 569 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 CBLP22681 906 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 GRPRP30550 384 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 P2RY4P51582 365 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 NR1H2P55055 460 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 LIPEQ05469 1076 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 FAPQ12884 760 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 KEAP1Q14145 624 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 TAB1Q15750 504 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 DEF8Q6ZN54 512 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 CARM1Q86X55 608 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 OR4D11Q8NGI4 311 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 ZNF417Q8TAU3 575 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 ADAMTS16Q8TE57 1224 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 TAAR8Q969N4 342 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 ZNF385AQ96PM9 386 aaKnown RBP13.09□□□□□ -0.31
ATG4D-207ENST00000587256 HS3ST6Q96QI5 342 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 ZNF587Q96SQ5 575 aaPredicted RBP13.09□□□□□ -0.31
ATG4D-207ENST00000587256 HOPXQ9BPY8 73 aaPredicted RBP13.09□□□□□ -0.31
ATG4D-207ENST00000587256 USB1Q9BQ65 265 aaKnown RBP13.09□□□□□ -0.31
ATG4D-207ENST00000587256 ASPNQ9BXN1 380 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 PLEKHF2Q9H8W4 249 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 NGBQ9NPG2 151 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 TAS2R16Q9NYV7 291 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 SEC14L4Q9UDX3 406 aa13.09□□□□□ -0.31
ATG4D-207ENST00000587256 TRAPPC13A5PLN9 417 aa13.08□□□□□ -0.32
ATG4D-207ENST00000587256 NME4O00746 187 aa13.08□□□□□ -0.32
ATG4D-207ENST00000587256 GSTA4O15217 222 aa13.08□□□□□ -0.32
ATG4D-207ENST00000587256 KRT33AO76009 404 aa13.08□□□□□ -0.32
ATG4D-207ENST00000587256 NQO1P15559 274 aaKnown RBP13.08□□□□□ -0.32
ATG4D-207ENST00000587256 TNFRSF1BP20333 461 aa13.08□□□□□ -0.32
ATG4D-207ENST00000587256 PRDX6P30041 224 aa13.08□□□□□ -0.32
ATG4D-207ENST00000587256 NTF4P34130 210 aa13.08□□□□□ -0.32
ATG4D-207ENST00000587256 ART1P52961 327 aa13.08□□□□□ -0.32
ATG4D-207ENST00000587256 IST1P53990 364 aa13.08□□□□□ -0.32
ATG4D-207ENST00000587256 MFSD13AQ14CX5 517 aa13.08□□□□□ -0.32
ATG4D-207ENST00000587256 CYBRD1Q53TN4 286 aa13.08□□□□□ -0.32
ATG4D-207ENST00000587256 HACD2Q6Y1H2 254 aa13.08□□□□□ -0.32
ATG4D-207ENST00000587256 SLC15A3Q8IY34 581 aa13.08□□□□□ -0.32
ATG4D-207ENST00000587256 ZNF433Q8N7K0 673 aaPredicted RBP13.08□□□□□ -0.32
ATG4D-207ENST00000587256 HSD17B8Q92506 261 aa13.08□□□□□ -0.32
ATG4D-207ENST00000587256 PLPPR2Q96GM1 343 aa13.08□□□□□ -0.32
ATG4D-207ENST00000587256 TPD52L3Q96J77 140 aa13.08□□□□□ -0.32
ATG4D-207ENST00000587256 TMEM43Q9BTV4 400 aa13.08□□□□□ -0.32
ATG4D-207ENST00000587256 SLCO5A1Q9H2Y9 848 aa13.08□□□□□ -0.32
ATG4D-207ENST00000587256 ALG2Q9H553 416 aa13.08□□□□□ -0.32
ATG4D-207ENST00000587256 UBTD1Q9HAC8 227 aa13.08□□□□□ -0.32
ATG4D-207ENST00000587256 CCM2LQ9NUG4 571 aaPredicted RBP13.08□□□□□ -0.32
ATG4D-207ENST00000587256 SLC7A7Q9UM01 511 aa13.08□□□□□ -0.32
ATG4D-207ENST00000587256 ARL2BPQ9Y2Y0 163 aa13.08□□□□□ -0.32
ATG4D-207ENST00000587256 KPNA4O00629 521 aaPredicted RBP13.07□□□□□ -0.32
ATG4D-207ENST00000587256 NDUFAB1O14561 156 aa13.07□□□□□ -0.32
ATG4D-207ENST00000587256 KLF4O43474 513 aa13.07□□□□□ -0.32
ATG4D-207ENST00000587256 ZNF43P17038 809 aa13.07□□□□□ -0.32
ATG4D-207ENST00000587256 HOXC12P31275 282 aa13.07□□□□□ -0.32
ATG4D-207ENST00000587256 KDELR2P33947 212 aa13.07□□□□□ -0.32
ATG4D-207ENST00000587256 TAS2R41P59536 307 aa13.07□□□□□ -0.32
ATG4D-207ENST00000587256 C1DQ13901 141 aaKnown RBP13.07□□□□□ -0.32
ATG4D-207ENST00000587256 PPA1Q15181 289 aa13.07□□□□□ -0.32
ATG4D-207ENST00000587256 TSPO2Q5TGU0 170 aa13.07□□□□□ -0.32
ATG4D-207ENST00000587256 C9orf135Q5VTT2 229 aa13.07□□□□□ -0.32
ATG4D-207ENST00000587256 NIPAL3Q6P499 406 aa13.07□□□□□ -0.32
ATG4D-207ENST00000587256 ZNF704Q6ZNC4 412 aaPredicted RBP13.07□□□□□ -0.32
ATG4D-207ENST00000587256 CREB3L2Q70SY1 520 aa13.07□□□□□ -0.32
ATG4D-207ENST00000587256 H1FNTQ75WM6 255 aaPredicted RBP13.07□□□□□ -0.32
ATG4D-207ENST00000587256 KDM8Q8N371 416 aa13.07□□□□□ -0.32
ATG4D-207ENST00000587256 ZIC4Q8N9L1 334 aa13.07□□□□□ -0.32
ATG4D-207ENST00000587256 POMGNT2Q8NAT1 580 aa13.07□□□□□ -0.32
ATG4D-207ENST00000587256 OR6S1Q8NH40 331 aa13.07□□□□□ -0.32
ATG4D-207ENST00000587256 LZICQ8WZA0 190 aa13.07□□□□□ -0.32
ATG4D-207ENST00000587256 MUCL1Q96DR8 90 aa13.07□□□□□ -0.32
ATG4D-207ENST00000587256 PCDHAC1Q9H158 963 aa13.07□□□□□ -0.32
ATG4D-207ENST00000587256 SLC7A10Q9NS82 523 aa13.07□□□□□ -0.32
ATG4D-207ENST00000587256 GMPR2Q9P2T1 348 aaKnown RBP13.07□□□□□ -0.32
ATG4D-207ENST00000587256 B3GALT5Q9Y2C3 310 aa13.07□□□□□ -0.32
ATG4D-207ENST00000587256 CORINQ9Y5Q5 1042 aa13.07□□□□□ -0.32
ATG4D-207ENST00000587256 CXCR6O00574 342 aa13.06□□□□□ -0.32
ATG4D-207ENST00000587256 AKAP8O43823 692 aaKnown RBP13.06□□□□□ -0.32
ATG4D-207ENST00000587256 SHOX2O60902 331 aaPredicted RBP13.06□□□□□ -0.32
ATG4D-207ENST00000587256 FZD7O75084 574 aa13.06□□□□□ -0.32
ATG4D-207ENST00000587256 DCTN3O75935 186 aa13.06□□□□□ -0.32
ATG4D-207ENST00000587256 BGLAPP02818 100 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms