RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 ARIH2OSQ8N7S6 290 aa16.86■□□□□ 0.29
TRAF4-216ENST00000586813 PAIP2Q9BPZ3 127 aaKnown RBP16.86■□□□□ 0.29
TRAF4-216ENST00000586813 KCNS3Q9BQ31 491 aa16.86■□□□□ 0.29
TRAF4-216ENST00000586813 PIMREGQ9BSJ6 248 aa16.86■□□□□ 0.29
TRAF4-216ENST00000586813 CENPHQ9H3R5 247 aa16.86■□□□□ 0.29
TRAF4-216ENST00000586813 KCNK9Q9NPC2 374 aa16.86■□□□□ 0.29
TRAF4-216ENST00000586813 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.85■□□□□ 0.291e-10■■■■□ 23.1
TRAF4-216ENST00000586813 A0A096LPI6 279 aa16.85■□□□□ 0.29
TRAF4-216ENST00000586813 ARPC4-TTLL3A0A0A6YYG9 625 aa16.85■□□□□ 0.29
TRAF4-216ENST00000586813 HDAC3O15379 428 aa16.85■□□□□ 0.29
TRAF4-216ENST00000586813 CRYAAP02489 173 aa16.85■□□□□ 0.29
TRAF4-216ENST00000586813 IL6P05231 212 aa16.85■□□□□ 0.29
TRAF4-216ENST00000586813 TFPTP0C1Z6 253 aa16.85■□□□□ 0.29
TRAF4-216ENST00000586813 PRG2P13727 222 aa16.85■□□□□ 0.29
TRAF4-216ENST00000586813 IGFBP5P24593 272 aa16.85■□□□□ 0.29
TRAF4-216ENST00000586813 SERPINF1P36955 418 aa16.85■□□□□ 0.29
TRAF4-216ENST00000586813 CRATP43155 626 aa16.85■□□□□ 0.29
TRAF4-216ENST00000586813 NR4A2P43354 598 aa16.85■□□□□ 0.29
TRAF4-216ENST00000586813 DSTNP60981 165 aa16.85■□□□□ 0.29
TRAF4-216ENST00000586813 UBE2NP61088 152 aaKnown RBP16.85■□□□□ 0.29
TRAF4-216ENST00000586813 LARS2Q15031 903 aaKnown RBP16.85■□□□□ 0.29
TRAF4-216ENST00000586813 RPS26P11Q5JNZ5 115 aaPredicted RBP16.85■□□□□ 0.29
TRAF4-216ENST00000586813 NIPAL3Q6P499 406 aa16.85■□□□□ 0.29
TRAF4-216ENST00000586813 LINGO2Q7L985 606 aa16.85■□□□□ 0.29
TRAF4-216ENST00000586813 SLC46A3Q7Z3Q1 461 aa16.85■□□□□ 0.29
TRAF4-216ENST00000586813 EPHX4Q8IUS5 362 aa16.85■□□□□ 0.29
TRAF4-216ENST00000586813 CLIP4Q8N3C7 705 aa16.85■□□□□ 0.29
TRAF4-216ENST00000586813 SLC38A5Q8WUX1 472 aa16.85■□□□□ 0.29
TRAF4-216ENST00000586813 BCL2L2Q92843 193 aaPredicted RBP16.85■□□□□ 0.29
TRAF4-216ENST00000586813 CRNNQ9UBG3 495 aaPredicted RBP16.85■□□□□ 0.29
TRAF4-216ENST00000586813 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.85■□□□□ 0.29
TRAF4-216ENST00000586813 CHST2Q9Y4C5 530 aa16.85■□□□□ 0.29
TRAF4-216ENST00000586813 V9GYY5 206 aaPredicted RBP16.85■□□□□ 0.29
TRAF4-216ENST00000586813 OR6C65A6NJZ3 312 aa16.84■□□□□ 0.29
TRAF4-216ENST00000586813 TRPC5OSA6NMA1 111 aa16.84■□□□□ 0.29
TRAF4-216ENST00000586813 TMEM229AB2RXF0 380 aa16.84■□□□□ 0.29
TRAF4-216ENST00000586813 NPIPB7O75200 414 aa16.84■□□□□ 0.29
TRAF4-216ENST00000586813 UPK3AO75631 287 aa16.84■□□□□ 0.29
TRAF4-216ENST00000586813 PDE5AO76074 875 aa16.84■□□□□ 0.29
TRAF4-216ENST00000586813 IDO1P14902 403 aa16.84■□□□□ 0.29
TRAF4-216ENST00000586813 NCF2P19878 526 aaPredicted RBP16.84■□□□□ 0.29
TRAF4-216ENST00000586813 PAX7P23759 505 aa16.84■□□□□ 0.29
TRAF4-216ENST00000586813 TUBA1BP68363 451 aa16.84■□□□□ 0.29
TRAF4-216ENST00000586813 TUBA4AP68366 448 aa16.84■□□□□ 0.29
TRAF4-216ENST00000586813 NAAAQ02083 359 aa16.84■□□□□ 0.29
TRAF4-216ENST00000586813 ZSWIM7Q19AV6 140 aa16.84■□□□□ 0.29
TRAF4-216ENST00000586813 KRTAP24-1Q3LI83 254 aa16.84■□□□□ 0.29
TRAF4-216ENST00000586813 PDCD4Q53EL6 469 aaKnown RBP16.84■□□□□ 0.29
TRAF4-216ENST00000586813 FAM166AQ6J272 317 aa16.84■□□□□ 0.29
TRAF4-216ENST00000586813 TUBA1AQ71U36 451 aa16.84■□□□□ 0.29
TRAF4-216ENST00000586813 SERPINA11Q86U17 422 aa16.84■□□□□ 0.29
TRAF4-216ENST00000586813 ANKS4BQ8N8V4 417 aa16.84■□□□□ 0.29
TRAF4-216ENST00000586813 C3orf49Q96BT1 292 aa16.84■□□□□ 0.29
TRAF4-216ENST00000586813 TMEM19Q96HH6 336 aa16.84■□□□□ 0.29
TRAF4-216ENST00000586813 ZNF317Q96PQ6 595 aaPredicted RBP16.84■□□□□ 0.29
TRAF4-216ENST00000586813 VRK1Q99986 396 aaPredicted RBP16.84■□□□□ 0.29
TRAF4-216ENST00000586813 PRR14Q9BWN1 585 aa16.84■□□□□ 0.29
TRAF4-216ENST00000586813 NELFAQ9H3P2 528 aa16.84■□□□□ 0.29
TRAF4-216ENST00000586813 CHODLQ9H9P2 273 aa16.84■□□□□ 0.29
TRAF4-216ENST00000586813 MYOZ1Q9NP98 299 aaPredicted RBP16.84■□□□□ 0.29
TRAF4-216ENST00000586813 KCNS2Q9ULS6 477 aa16.84■□□□□ 0.29
TRAF4-216ENST00000586813 RASD1Q9Y272 281 aa16.84■□□□□ 0.29
TRAF4-216ENST00000586813 IGHV4-61A0A0C4DH41 118 aa16.83■□□□□ 0.28
TRAF4-216ENST00000586813 LOC390937A0A1W2PQ73 354 aa16.83■□□□□ 0.28
TRAF4-216ENST00000586813 NR5A2O00482 541 aa16.83■□□□□ 0.28
TRAF4-216ENST00000586813 SLC22A3O75751 556 aa16.83■□□□□ 0.28
TRAF4-216ENST00000586813 CECR9P0C854 216 aa16.83■□□□□ 0.28
TRAF4-216ENST00000586813 ZCCHC18P0CG32 403 aa16.83■□□□□ 0.28
TRAF4-216ENST00000586813 SRD5A1P18405 259 aa16.83■□□□□ 0.28
TRAF4-216ENST00000586813 THBS2P35442 1172 aa16.83■□□□□ 0.28
TRAF4-216ENST00000586813 ADIPOQQ15848 244 aa16.83■□□□□ 0.28
TRAF4-216ENST00000586813 CARTPTQ16568 116 aa16.83■□□□□ 0.28
TRAF4-216ENST00000586813 CEP85LQ5SZL2 805 aa16.83■□□□□ 0.28
TRAF4-216ENST00000586813 HHATQ5VTY9 493 aa16.83■□□□□ 0.28
TRAF4-216ENST00000586813 ANKRD16Q6P6B7 361 aa16.83■□□□□ 0.28
TRAF4-216ENST00000586813 MAGEE2Q8TD90 523 aaPredicted RBP16.83■□□□□ 0.28
TRAF4-216ENST00000586813 STK35Q8TDR2 534 aa16.83■□□□□ 0.28
TRAF4-216ENST00000586813 ZBTB9Q96C00 473 aa16.83■□□□□ 0.28
TRAF4-216ENST00000586813 MSI2Q96DH6 328 aaKnown RBP16.83■□□□□ 0.28
TRAF4-216ENST00000586813 SPATA9Q9BWV2 254 aa16.83■□□□□ 0.28
TRAF4-216ENST00000586813 LINC00470Q9BZP3 86 aa16.83■□□□□ 0.28
TRAF4-216ENST00000586813 TPT1P8Q9HAU6 139 aa16.83■□□□□ 0.28
TRAF4-216ENST00000586813 A0A096LPE4 126 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 LOC100289279A0A1B0GTE1 492 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 A0A1W2PPZ6 126 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 SLC35F4A4IF30 521 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 B9A039 149 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 FTCDNL1E5RQL4 147 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 SNNO75324 88 aaPredicted RBP16.82■□□□□ 0.28
TRAF4-216ENST00000586813 AHSA1O95433 338 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 ANP32DO95626 131 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 IGLV1-44P01699 117 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 OR4A8P0C604 315 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 KITP10721 976 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 PNMTP11086 282 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 APEHP13798 732 aaKnown RBP16.82■□□□□ 0.28
TRAF4-216ENST00000586813 SH3BGRP55822 239 aaPredicted RBP16.82■□□□□ 0.28
TRAF4-216ENST00000586813 ROR2Q01974 943 aaKnown RBP16.82■□□□□ 0.28
TRAF4-216ENST00000586813 EFNB3Q15768 340 aa16.82■□□□□ 0.28
TRAF4-216ENST00000586813 C3orf36Q3SXR2 165 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms