RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 EMC3Q9P0I2 261 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 RALYQ9UKM9 306 aaKnown RBP11.62□□□□□ -0.55
TRIM47-202ENST00000585333 CAMK2AQ9UQM7 478 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 NOX1Q9Y5S8 564 aa11.62□□□□□ -0.55
TRIM47-202ENST00000585333 A0A0J9YW62 118 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 A0A1W2PNV4 684 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 A0A1W2PRG6 482 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 ZC3H12DA2A288 527 aaKnown RBP11.61□□□□□ -0.55
TRIM47-202ENST00000585333 AQP7P3A6NL99 342 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 FTCDNL1E5RQL4 147 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 PDLIM1O00151 329 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 TNFSF11O14788 317 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 EFNA2O43921 213 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 PIP5K1CO60331 668 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 PRKACGP22612 351 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 GRPRP30550 384 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 RPL4P36578 427 aaKnown RBP11.61□□□□□ -0.55
TRIM47-202ENST00000585333 DAPP51397 102 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 DAP3P51398 398 aaKnown RBP11.61□□□□□ -0.55
TRIM47-202ENST00000585333 SMSP52788 366 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 CLDN15P56746 228 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 RPS4XP62701 263 aaKnown RBP11.61□□□□□ -0.55
TRIM47-202ENST00000585333 IL1RL1Q01638 556 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 ZP4Q12836 540 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 LY6DQ14210 128 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 PDK3Q15120 406 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 EMC4Q5J8M3 183 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 EEF1A1P5Q5VTE0 462 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 LPCAT4Q643R3 524 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 GPR139Q6DWJ6 353 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 TMEM225Q6GV28 225 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 OR2A2Q6IF42 318 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 SLC27A4Q6P1M0 643 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 GFRALQ6UXV0 394 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 SLC46A3Q7Z3Q1 461 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 MCEMP1Q8IX19 187 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 OR2T33Q8NG76 320 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 ZNF524Q96C55 264 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 SNRNP40Q96DI7 357 aaKnown RBP11.61□□□□□ -0.55
TRIM47-202ENST00000585333 ADGRG7Q96K78 797 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 GABARAPL3Q9BY60 117 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 FANCFQ9NPI8 374 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 C20orf141Q9NUB4 165 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 TBC1D23Q9NUY8 699 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 KLHL9Q9P2J3 617 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 SIGLEC7Q9Y286 467 aa11.61□□□□□ -0.55
TRIM47-202ENST00000585333 LOC400499M0QZD8 3231 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 A0A1B0GTH9 108 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 A0A1W2PNR3 127 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 H0YAE9 185 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 BLOC1S5-TXNDC5H3BN57 136 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 M0R082 166 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 SOCS2O14508 198 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 IMPA2O14732 288 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 RNF13O43567 381 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 IFNGP01579 166 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 HMGN1P05114 100 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 ADORA3P0DMS8 318 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 IMPDH2P12268 514 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 POU2F1P14859 743 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 ZNF26P17031 533 aaPredicted RBP11.6□□□□□ -0.55
TRIM47-202ENST00000585333 MAKP20794 623 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 IL11P20809 199 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 CLDN20P56880 219 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 IL18R1Q13478 541 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 C1DQ13901 141 aaKnown RBP11.6□□□□□ -0.55
TRIM47-202ENST00000585333 LAPTM4AQ15012 233 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 POU4F3Q15319 338 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 CTU2Q2VPK5 515 aaKnown RBP11.6□□□□□ -0.55
TRIM47-202ENST00000585333 ALG10Q5BKT4 473 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 KLHL17Q6TDP4 642 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 DPY19L2P2Q6ZN68 376 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 P4HA3Q7Z4N8 544 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 PXKQ7Z7A4 578 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 P3H2Q8IVL5 708 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 HS3ST5Q8IZT8 346 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 DEPDC4Q8N2C3 294 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 GALNT4Q8N4A0 578 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 DHRSXQ8N5I4 330 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 ST6GALNAC3Q8NDV1 305 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 SETD9Q8NE22 299 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 ZNF417Q8TAU3 575 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 FNDC8Q8TC99 324 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 CPT1CQ8TCG5 803 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 WDYHV1Q96HA8 205 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 ZFP3Q96NJ6 502 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 OXGR1Q96P68 337 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 SLC38A2Q96QD8 506 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 UCN2Q96RP3 112 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 GPX7Q96SL4 187 aaPredicted RBP11.6□□□□□ -0.55
TRIM47-202ENST00000585333 ZNF587Q96SQ5 575 aaPredicted RBP11.6□□□□□ -0.55
TRIM47-202ENST00000585333 NPAS1Q99742 590 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 TM9SF2Q99805 663 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 APOL4Q9BPW4 351 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 NIPSNAP1Q9BPW8 284 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 TSPAN10Q9H1Z9 355 aaPredicted RBP11.6□□□□□ -0.55
TRIM47-202ENST00000585333 OR52D1Q9H346 318 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 TP63Q9H3D4 680 aaPredicted RBP11.6□□□□□ -0.55
TRIM47-202ENST00000585333 CALHM2Q9HA72 323 aa11.6□□□□□ -0.55
TRIM47-202ENST00000585333 SMURF2Q9HAU4 748 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms