RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 TEAD3Q99594 435 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 WACQ9BTA9 647 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 WWTR1Q9GZV5 400 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 MMP28Q9H239 520 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 OSGIN1Q9UJX0 560 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 FBXL2Q9UKC9 423 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 WBP11Q9Y2W2 641 aaKnown RBP9.37□□□□□ -0.91
RFFL-212ENST00000584655 PRODHO43272 600 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 CALCBP10092 127 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 ITGA3P26006 1051 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 HSD17B7P56937 341 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 GMFBP60983 142 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 ZXDAP98168 799 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 IFITM3Q01628 133 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 EEF1A1P5Q5VTE0 462 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 ULK3Q6PHR2 472 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 TMPRSS7Q7RTY8 843 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 PHC2Q8IXK0 858 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 ZNF527Q8NB42 609 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 SLC7A6Q92536 515 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 C3orf49Q96BT1 292 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 TXNDC15Q96J42 360 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 WDR77Q9BQA1 342 aaPredicted RBP9.37□□□□□ -0.91
RFFL-212ENST00000584655 TUBA1CQ9BQE3 449 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 ACACBO00763 2458 aa9.37□□□□□ -0.91
RFFL-212ENST00000584655 NUP210Q8TEM1 1887 aaPredicted RBP9.37□□□□□ -0.91
RFFL-212ENST00000584655 TRBV2A0A0J9YWF9 115 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 A0A1W2PPL8 197 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 SUSD5O60279 629 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 TP53P04637 393 aaPredicted RBP9.36□□□□□ -0.91
RFFL-212ENST00000584655 LIMS3P0CW19 117 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 LIMS4P0CW20 117 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 APEX1P27695 318 aaKnown RBP9.36□□□□□ -0.91
RFFL-212ENST00000584655 TMBIM6P55061 237 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 LGALS3BPQ08380 585 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 EBPQ15125 230 aaKnown RBP9.36□□□□□ -0.91
RFFL-212ENST00000584655 C3AR1Q16581 482 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 FHL5Q5TD97 284 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 TMEM225Q6GV28 225 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 CREB3L1Q96BA8 519 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 OR14A2Q96R54 314 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 UBL7Q96S82 380 aaPredicted RBP9.36□□□□□ -0.91
RFFL-212ENST00000584655 MND1Q9BWT6 205 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 SIAEQ9HAT2 523 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 SURF4O15260 269 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 NKX2-2O95096 273 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 LDOC1O95751 146 aaPredicted RBP9.36□□□□□ -0.91
RFFL-212ENST00000584655 PATE4P0C8F1 98 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 GSTM3P21266 225 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 TGFBR2P37173 567 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 CDKN2AP42771 156 aaKnown RBP9.36□□□□□ -0.91
RFFL-212ENST00000584655 CTBP2P56545 445 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 RPL18Q07020 188 aaKnown RBP9.36□□□□□ -0.91
RFFL-212ENST00000584655 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.36□□□□□ -0.91
RFFL-212ENST00000584655 IL18R1Q13478 541 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 ESPL1Q14674 2120 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 MOGQ16653 247 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 SLC46A3Q7Z3Q1 461 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 LRRC18Q8N456 261 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 KLHL36Q8N4N3 616 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 YTHDF1Q9BYJ9 559 aaKnown RBP9.36□□□□□ -0.91
RFFL-212ENST00000584655 EXO5Q9H790 373 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 SIGLEC7Q9Y286 467 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 A0A1B0GTQ1 180 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 TMEM221A6NGB7 291 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 LILRA5A6NI73 299 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 SNTNA6NMZ2 147 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 FAM166BA8MTA8 275 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 C9J4A7 227 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 M0R296 226 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 DDAH2O95865 285 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 AGR2O95994 175 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 HOXC4P09017 264 aaPredicted RBP9.36□□□□□ -0.91
RFFL-212ENST00000584655 HK1P19367 917 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 CAPZA2P47755 286 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 WNT4P56705 351 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 ZNF846Q147U1 533 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 ZNF468Q5VIY5 522 aaPredicted RBP9.36□□□□□ -0.91
RFFL-212ENST00000584655 SAMD12Q8N8I0 201 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 HES7Q9BYE0 225 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 TAS2R10Q9NYW0 307 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 KCND3Q9UK17 655 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 PILRBQ9UKJ0 227 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 ATG2AQ2TAZ0 1938 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 FAM208BQ5VWN6 2430 aa9.36□□□□□ -0.91
RFFL-212ENST00000584655 FMO6PO60774 539 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 ITGA10O75578 1167 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 OR2B6P58173 313 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 PRAMEF8Q5VWM4 474 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 PRAMEF7Q5VXH5 474 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 TMPRSS11AQ6ZMR5 421 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 ZNF615Q8N8J6 731 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 AGBL5Q8NDL9 886 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 ARHGDIGQ99819 225 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 PPIL3Q9H2H8 161 aaKnown RBP9.35□□□□□ -0.91
RFFL-212ENST00000584655 B3GAT2Q9NPZ5 323 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 ENOPH1Q9UHY7 261 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 BOLA1Q9Y3E2 137 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 FABP12A6NFH5 140 aa9.35□□□□□ -0.91
RFFL-212ENST00000584655 APOA1P02647 267 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms