RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 PNMTP11086 282 aa18.84■□□□□ 0.61
PPP4R1-228ENST00000584074 RGS8P57771 180 aaPredicted RBP18.84■□□□□ 0.61
PPP4R1-228ENST00000584074 SF3A3Q12874 501 aaKnown RBP eCLIP18.84■□□□□ 0.61
PPP4R1-228ENST00000584074 ALG10BQ5I7T1 473 aa18.84■□□□□ 0.61
PPP4R1-228ENST00000584074 EPHX4Q8IUS5 362 aa18.84■□□□□ 0.61
PPP4R1-228ENST00000584074 CIARTQ8N365 385 aaPredicted RBP18.84■□□□□ 0.61
PPP4R1-228ENST00000584074 WDR31Q8NA23 367 aa18.84■□□□□ 0.61
PPP4R1-228ENST00000584074 SMYD1Q8NB12 490 aa18.84■□□□□ 0.61
PPP4R1-228ENST00000584074 DNAJA4Q8WW22 397 aaPredicted RBP18.84■□□□□ 0.61
PPP4R1-228ENST00000584074 TAAR8Q969N4 342 aa18.84■□□□□ 0.61
PPP4R1-228ENST00000584074 C1QTNF6Q9BXI9 259 aa18.84■□□□□ 0.61
PPP4R1-228ENST00000584074 AMBRA1Q9C0C7 1298 aa18.84■□□□□ 0.61
PPP4R1-228ENST00000584074 SLCO5A1Q9H2Y9 848 aa18.84■□□□□ 0.61
PPP4R1-228ENST00000584074 PIF1Q9H611 641 aa18.84■□□□□ 0.61
PPP4R1-228ENST00000584074 SLC13A4Q9UKG4 626 aa18.84■□□□□ 0.61
PPP4R1-228ENST00000584074 ANGPT4Q9Y264 503 aa18.84■□□□□ 0.61
PPP4R1-228ENST00000584074 RASD1Q9Y272 281 aa18.84■□□□□ 0.61
PPP4R1-228ENST00000584074 IGKV1D-42A0A075B6H8 117 aa18.83■□□□□ 0.6
PPP4R1-228ENST00000584074 TRIM64A6NGJ6 449 aa18.83■□□□□ 0.6
PPP4R1-228ENST00000584074 TRIM64BA6NI03 449 aa18.83■□□□□ 0.6
PPP4R1-228ENST00000584074 TPST2O60704 377 aa18.83■□□□□ 0.6
PPP4R1-228ENST00000584074 TMCC2O75069 709 aa18.83■□□□□ 0.6
PPP4R1-228ENST00000584074 MPGP29372 298 aa18.83■□□□□ 0.6
PPP4R1-228ENST00000584074 SELENOPP49908 381 aa18.83■□□□□ 0.6
PPP4R1-228ENST00000584074 PCBP3P57721 371 aaKnown RBP18.83■□□□□ 0.6
PPP4R1-228ENST00000584074 RPS4XP62701 263 aaKnown RBP18.83■□□□□ 0.6
PPP4R1-228ENST00000584074 LGALS3BPQ08380 585 aa18.83■□□□□ 0.6
PPP4R1-228ENST00000584074 ULK3Q6PHR2 472 aa18.83■□□□□ 0.6
PPP4R1-228ENST00000584074 BIVMQ86UB2 503 aa18.83■□□□□ 0.6
PPP4R1-228ENST00000584074 POMGNT2Q8NAT1 580 aa18.83■□□□□ 0.6
PPP4R1-228ENST00000584074 KAT8Q9H7Z6 458 aaKnown RBP18.83■□□□□ 0.6
PPP4R1-228ENST00000584074 FGFR1OP2Q9NVK5 253 aa18.83■□□□□ 0.6
PPP4R1-228ENST00000584074 CISD1Q9NZ45 108 aaKnown RBP18.83■□□□□ 0.6
PPP4R1-228ENST00000584074 TESQ9UGI8 421 aaKnown RBP18.83■□□□□ 0.6
PPP4R1-228ENST00000584074 MAGED1Q9Y5V3 778 aaPredicted RBP18.83■□□□□ 0.6
PPP4R1-228ENST00000584074 H7C1Q1 480 aa18.82■□□□□ 0.6
PPP4R1-228ENST00000584074 OVOL3O00110 214 aa18.82■□□□□ 0.6
PPP4R1-228ENST00000584074 FBP2O00757 339 aa18.82■□□□□ 0.6
PPP4R1-228ENST00000584074 TROVE2P10155 538 aaKnown RBP eCLIP18.82■□□□□ 0.6
PPP4R1-228ENST00000584074 CDH2P19022 906 aaPredicted RBP18.82■□□□□ 0.6
PPP4R1-228ENST00000584074 CDH11P55287 796 aa18.82■□□□□ 0.6
PPP4R1-228ENST00000584074 ATP5J2P56134 94 aa18.82■□□□□ 0.6
PPP4R1-228ENST00000584074 NCALDP61601 193 aa18.82■□□□□ 0.6
PPP4R1-228ENST00000584074 SLC25A3Q00325 362 aa18.82■□□□□ 0.6
PPP4R1-228ENST00000584074 TGFBR3Q03167 851 aa18.82■□□□□ 0.6
PPP4R1-228ENST00000584074 SPOCK1Q08629 439 aa18.82■□□□□ 0.6
PPP4R1-228ENST00000584074 RBBP4Q09028 425 aa18.82■□□□□ 0.6
PPP4R1-228ENST00000584074 OR1Q1Q15612 314 aa18.82■□□□□ 0.6
PPP4R1-228ENST00000584074 PGGHGQ32M88 737 aa18.82■□□□□ 0.6
PPP4R1-228ENST00000584074 FAM91A1Q658Y4 838 aa18.82■□□□□ 0.6
PPP4R1-228ENST00000584074 CGB2Q6NT52 195 aa18.82■□□□□ 0.6
PPP4R1-228ENST00000584074 KLHL17Q6TDP4 642 aa18.82■□□□□ 0.6
PPP4R1-228ENST00000584074 TMEM108Q6UXF1 575 aa18.82■□□□□ 0.6
PPP4R1-228ENST00000584074 PIAS4Q8N2W9 510 aaPredicted RBP18.82■□□□□ 0.6
PPP4R1-228ENST00000584074 C1orf162Q8NEQ5 155 aaPredicted RBP18.82■□□□□ 0.6
PPP4R1-228ENST00000584074 BHLHE22Q8NFJ8 381 aaPredicted RBP18.82■□□□□ 0.6
PPP4R1-228ENST00000584074 RNF217Q8TC41 542 aa18.82■□□□□ 0.6
PPP4R1-228ENST00000584074 SLC38A4Q969I6 547 aa18.82■□□□□ 0.6
PPP4R1-228ENST00000584074 SLC17A5Q9NRA2 495 aa18.82■□□□□ 0.6
PPP4R1-228ENST00000584074 TRAV36DV7A0A075B6V5 113 aa18.81■□□□□ 0.6
PPP4R1-228ENST00000584074 M0QX08 132 aa18.81■□□□□ 0.6
PPP4R1-228ENST00000584074 M0R082 166 aa18.81■□□□□ 0.6
PPP4R1-228ENST00000584074 M0R1B8 84 aa18.81■□□□□ 0.6
PPP4R1-228ENST00000584074 FZD7O75084 574 aa18.81■□□□□ 0.6
PPP4R1-228ENST00000584074 KRT33AO76009 404 aa18.81■□□□□ 0.6
PPP4R1-228ENST00000584074 OPN1SWP03999 348 aa18.81■□□□□ 0.6
PPP4R1-228ENST00000584074 CBLP22681 906 aa18.81■□□□□ 0.6
PPP4R1-228ENST00000584074 PTAFRP25105 342 aa18.81■□□□□ 0.6
PPP4R1-228ENST00000584074 CD40P25942 277 aa18.81■□□□□ 0.6
PPP4R1-228ENST00000584074 GTF2E2P29084 291 aaKnown RBP18.81■□□□□ 0.6
PPP4R1-228ENST00000584074 DUSP7Q16829 419 aa18.81■□□□□ 0.6
PPP4R1-228ENST00000584074 NIPAL3Q6P499 406 aa18.81■□□□□ 0.6
PPP4R1-228ENST00000584074 Q71RC1 249 aaPredicted RBP18.81■□□□□ 0.6
PPP4R1-228ENST00000584074 NET1Q7Z628 596 aaPredicted RBP18.81■□□□□ 0.6
PPP4R1-228ENST00000584074 C17orf78Q8N4C9 275 aa18.81■□□□□ 0.6
PPP4R1-228ENST00000584074 ZNF417Q8TAU3 575 aa18.81■□□□□ 0.6
PPP4R1-228ENST00000584074 SLC47A1Q96FL8 570 aa18.81■□□□□ 0.6
PPP4R1-228ENST00000584074 COX4I2Q96KJ9 171 aa18.81■□□□□ 0.6
PPP4R1-228ENST00000584074 ZNF587Q96SQ5 575 aaPredicted RBP18.81■□□□□ 0.6
PPP4R1-228ENST00000584074 TMEM27Q9HBJ8 222 aa18.81■□□□□ 0.6
PPP4R1-228ENST00000584074 KLHL14Q9P2G3 628 aa18.81■□□□□ 0.6
PPP4R1-228ENST00000584074 A0A0B4J2E0 115 aa18.8■□□□□ 0.6
PPP4R1-228ENST00000584074 A0A1B0GX12 115 aa18.8■□□□□ 0.6
PPP4R1-228ENST00000584074 M0R3H8 397 aa18.8■□□□□ 0.6
PPP4R1-228ENST00000584074 OR2T1O43869 369 aa18.8■□□□□ 0.6
PPP4R1-228ENST00000584074 LGI1O95970 557 aa18.8■□□□□ 0.6
PPP4R1-228ENST00000584074 PTNP21246 168 aa18.8■□□□□ 0.6
PPP4R1-228ENST00000584074 GRPRP30550 384 aa18.8■□□□□ 0.6
PPP4R1-228ENST00000584074 CDKN1AP38936 164 aa18.8■□□□□ 0.6
PPP4R1-228ENST00000584074 CDH12P55289 794 aa18.8■□□□□ 0.6
PPP4R1-228ENST00000584074 HIKESHIQ53FT3 197 aa18.8■□□□□ 0.6
PPP4R1-228ENST00000584074 FAM69AQ5T7M9 428 aa18.8■□□□□ 0.6
PPP4R1-228ENST00000584074 SLC22A25Q6T423 547 aa18.8■□□□□ 0.6
PPP4R1-228ENST00000584074 C5orf46Q6UWT4 87 aa18.8■□□□□ 0.6
PPP4R1-228ENST00000584074 LINGO2Q7L985 606 aa18.8■□□□□ 0.6
PPP4R1-228ENST00000584074 GPR32P1Q8NGA4 272 aa18.8■□□□□ 0.6
PPP4R1-228ENST00000584074 OR10A6Q8NH74 314 aa18.8■□□□□ 0.6
PPP4R1-228ENST00000584074 GTPBP3Q969Y2 492 aaKnown RBP18.8■□□□□ 0.6
PPP4R1-228ENST00000584074 RADILQ96JH8 1075 aa18.8■□□□□ 0.6
PPP4R1-228ENST00000584074 BDH2Q9BUT1 245 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms