RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	SPRYD4	Q8WW59	207 aa	Predicted RBP	10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	OR5P2	Q8WZ92	322 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	RAB24	Q969Q5	203 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	COX14	Q96I36	57 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	AIF1L	Q9BQI0	150 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	TPSD1	Q9BZJ3	242 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	SLC19A3	Q9BZV2	496 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	EPHX3	Q9H6B9	360 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	TMEM74B	Q9NUR3	256 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	CYP8B1	Q9UNU6	501 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	PRODH	O43272	600 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	REM1	O75628	298 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	NXPH2	O95156	264 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	CLEC3B	P05452	202 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	DRD1	P21728	446 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	TBXA2R	P21731	343 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	CERS1	P27544	350 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	IGFALS	P35858	605 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	TPMT	P51580	245 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	CCR8	P51685	355 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	AGFG1	P52594	562 aa	Known RBP	10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	CDH11	P55287	796 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	OR10A3	P58181	314 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	GAS6	Q14393	721 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	KCNMB1	Q16558	191 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	CDC73	Q6P1J9	531 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	LHFPL4	Q7Z7J7	247 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	NR2C2AP	Q86WQ0	139 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	OR4N5	Q8IXE1	308 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	BEST4	Q8NFU0	473 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	LINC00615	Q96LM1	132 aa	Predicted RBP	10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	CITED2	Q99967	270 aa	Predicted RBP	10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	PPIL3	Q9H2H8	161 aa	Known RBP	10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	DDX31	Q9H8H2	851 aa	Known RBP	10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	CHODL	Q9H9P2	273 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	FGF22	Q9HCT0	170 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	SEMA4G	Q9NTN9	838 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	CFAP54	Q96N23	3096 aa		10.69	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	TP53BP1	Q12888	1972 aa	Predicted RBP	10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	IQCM	A0A1B0GVH7	501 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	ERI3	O43414	337 aa	Known RBP	10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	KCNAB3	O43448	404 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	NUDT21	O43809	227 aa	Known RBP	10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	EML2	O95834	649 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	PIP	P12273	146 aa	Predicted RBP	10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	CPE	P16870	476 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	ZNF81	P51508	661 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	ASAH1	Q13510	395 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	ENPP2	Q13822	863 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	KLHL12	Q53G59	568 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	RPTN	Q6XPR3	784 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	ESPNL	Q6ZVH7	1005 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	OR2L5	Q8NG80	312 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	GRPEL2	Q8TAA5	225 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	ADAMTS14	Q8WXS8	1223 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	ZCCHC14	Q8WYQ9	949 aa	Known RBP	10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	UFD1	Q92890	307 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	AMDHD1	Q96NU7	426 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	WDR77	Q9BQA1	342 aa	Predicted RBP	10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	APOO	Q9BUR5	198 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	BTBD1	Q9H0C5	482 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	KLHL1	Q9NR64	748 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	TES	Q9UGI8	421 aa	Known RBP	10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	SIRT4	Q9Y6E7	314 aa	Predicted RBP	10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	ABCA7	Q8IZY2	2146 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063		A0A1W2PR48	441 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	OR14I1	A6ND48	311 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	ZNF716	A6NP11	495 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	LYRM1	O43325	122 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	PLRG1	O43660	514 aa	Known RBP	10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	CEACAM5	P06731	702 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	ZNF735	P0CB33	412 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	POU3F2	P20265	443 aa	Predicted RBP	10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	UQCRC1	P31930	480 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	REEP5	Q00765	189 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	ID2	Q02363	134 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	SMCO1	Q147U7	214 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	UBXN2B	Q14CS0	331 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	METRNL	Q641Q3	311 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	TMEFF1	Q8IYR6	380 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	RDH10	Q8IZV5	341 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	OR5T1	Q8NG75	326 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	OR4M1	Q8NGD0	313 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	TMEM255B	Q8WV15	326 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	CNRIP1	Q96F85	164 aa	Predicted RBP	10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	GABRG3	Q99928	467 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	C1QTNF2	Q9BXJ5	285 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	RAB33B	Q9H082	229 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	ENKD1	Q9H0I2	346 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	UBE2Z	Q9H832	354 aa	Predicted RBP	10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	WSB2	Q9NYS7	404 aa	Predicted RBP	10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	ICK	Q9UPZ9	632 aa		10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	SF3B6	Q9Y3B4	125 aa	Known RBP	10.68	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	TDRD6	O60522	2096 aa	Known RBP	10.67	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	NPIPA5	A0A0B4J1W7	369 aa		10.67	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	TEX13C	A0A0J9YWL9	993 aa		10.67	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	GABRP	O00591	440 aa		10.67	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	AKAP8	O43823	692 aa	Known RBP	10.67	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	PRAMEF2	O60811	474 aa		10.67	□□□□□ -0.7
CDK5RAP3-231	ENST00000584063	H2AFB2	P0C5Z0	115 aa		10.67	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms