RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 DHDDSQ86SQ9 333 aa3.72□□□□□ -1.81
SMARCE1-219ENST00000583294 ECHDC2Q86YB7 292 aa3.72□□□□□ -1.81
SMARCE1-219ENST00000583294 LINC01555Q8NAE3 123 aa3.72□□□□□ -1.81
SMARCE1-219ENST00000583294 OR6C4Q8NGE1 309 aa3.72□□□□□ -1.81
SMARCE1-219ENST00000583294 FAM110BQ8TC76 370 aa3.72□□□□□ -1.81
SMARCE1-219ENST00000583294 ZNF414Q96IQ9 312 aa3.72□□□□□ -1.81
SMARCE1-219ENST00000583294 OXGR1Q96P68 337 aa3.72□□□□□ -1.81
SMARCE1-219ENST00000583294 COPS8Q99627 209 aa3.72□□□□□ -1.81
SMARCE1-219ENST00000583294 CCT7Q99832 543 aa3.72□□□□□ -1.81
SMARCE1-219ENST00000583294 MMP26Q9NRE1 261 aa3.72□□□□□ -1.81
SMARCE1-219ENST00000583294 BFARQ9NZS9 450 aa3.72□□□□□ -1.81
SMARCE1-219ENST00000583294 ADAM28Q9UKQ2 775 aa3.72□□□□□ -1.81
SMARCE1-219ENST00000583294 RBMY1BA6NDE4 496 aaKnown RBP3.71□□□□□ -1.82
SMARCE1-219ENST00000583294 RBMY1EA6NEQ0 496 aaKnown RBP3.71□□□□□ -1.82
SMARCE1-219ENST00000583294 LOC110117498-PIK3R3F6TDL0 507 aa3.71□□□□□ -1.82
SMARCE1-219ENST00000583294 RBMY1DP0C7P1 496 aaKnown RBP3.71□□□□□ -1.82
SMARCE1-219ENST00000583294 RBMY1A1P0DJD3 496 aaKnown RBP3.71□□□□□ -1.82
SMARCE1-219ENST00000583294 NR2C1P13056 603 aa3.71□□□□□ -1.82
SMARCE1-219ENST00000583294 GLP1RP43220 463 aa3.71□□□□□ -1.82
SMARCE1-219ENST00000583294 DUSP3P51452 185 aaPredicted RBP3.71□□□□□ -1.82
SMARCE1-219ENST00000583294 IGFL2Q6UWQ7 119 aa3.71□□□□□ -1.82
SMARCE1-219ENST00000583294 MKXQ8IYA7 352 aa3.71□□□□□ -1.82
SMARCE1-219ENST00000583294 ACOT4Q8N9L9 421 aa3.71□□□□□ -1.82
SMARCE1-219ENST00000583294 C10orf35Q96D05 121 aa3.71□□□□□ -1.82
SMARCE1-219ENST00000583294 SLC41A3Q96GZ6 507 aa3.71□□□□□ -1.82
SMARCE1-219ENST00000583294 SLC35E1Q96K37 410 aa3.71□□□□□ -1.82
SMARCE1-219ENST00000583294 MTMR9Q96QG7 549 aa3.71□□□□□ -1.82
SMARCE1-219ENST00000583294 NRTNQ99748 197 aa3.71□□□□□ -1.82
SMARCE1-219ENST00000583294 PARD6BQ9BYG5 372 aa3.71□□□□□ -1.82
SMARCE1-219ENST00000583294 CACNG2Q9Y698 323 aa3.71□□□□□ -1.82
SMARCE1-219ENST00000583294 A0A1B0GVL5 298 aa3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 HSD17B6O14756 317 aa3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 AGPAT2O15120 278 aa3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 FAM189A1O60320 539 aa3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 IGHV4-34P06331 123 aa3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 CHTF8P0CG12 524 aa3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 ABOP16442 354 aa3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 FMO3P31513 532 aa3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 ARRB1P49407 418 aaPredicted RBP3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 CDK16Q00536 496 aa3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 ATP6AP1Q15904 470 aa3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 ZNF658BQ4V348 819 aaPredicted RBP3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 BOLA3Q53S33 107 aa3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 CASC10Q5T4H9 136 aa3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 GPR157Q5UAW9 335 aa3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 CENPPQ6IPU0 288 aa3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 ZNF620Q6ZNG0 422 aa3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 PAQR7Q86WK9 346 aa3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 ZNF679Q8IYX0 411 aa3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 ZCCHC7Q8N3Z6 543 aaKnown RBP3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 MAGEE2Q8TD90 523 aaPredicted RBP3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 ITCHQ96J02 903 aa3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 LINC00167Q96N53 147 aa3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 ROGDIQ9GZN7 287 aa3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 KCNIP1Q9NZI2 227 aa3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 ZNF225Q9UK10 706 aa3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 ATP10AO60312 1499 aa3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 SCN2AQ99250 2005 aa3.7□□□□□ -1.82
SMARCE1-219ENST00000583294 KIR2DL5BA0A0G2JN68 375 aa3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 KIR2DL5BA0A0G2JPC4 375 aa3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 A0A1B0GUA9 196 aa3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 PCP4L1A6NKN8 68 aa3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 NBR2O15453 112 aa3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 TIMM8AO60220 97 aaPredicted RBP3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 TOM1O60784 492 aa3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 SURF6O75683 361 aaKnown RBP3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 CAPN1P07384 714 aa3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 ICAM2P13598 275 aa3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 MDKP21741 143 aaPredicted RBP3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 CCNCP24863 283 aa3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 IL12AP29459 219 aa3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 BTCP35070 178 aa3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 DLX1P56177 255 aa3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 OR5I1Q13606 314 aa3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 ACP7Q6ZNF0 438 aa3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 EFL1Q7Z2Z2 1120 aaKnown RBP3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 TMEM61Q8N0U2 210 aa3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 KIR2DL5AQ8N109 375 aa3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 FAM71E2Q8N5Q1 922 aa3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 EIF1ADQ8N9N8 165 aaKnown RBP3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 BHLHE23Q8NDY6 225 aa3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 KIR2DL5BQ8NHK3 375 aa3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 NDRG1Q92597 394 aaKnown RBP3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 ZNF799Q96GE5 643 aa3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 NRIP2Q9BQI9 281 aa3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 MCCC2Q9HCC0 563 aa3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 ZNF331Q9NQX6 463 aaPredicted RBP3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 KCNIP3Q9Y2W7 256 aa3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 LTBP1Q14766 1721 aa3.69□□□□□ -1.82
SMARCE1-219ENST00000583294 OBSCNQ5VST9 7968 aa3.68□□□□□ -1.82
SMARCE1-219ENST00000583294 ATAD2BQ9ULI0 1458 aa3.68□□□□□ -1.82
SMARCE1-219ENST00000583294 CDC42BPBQ9Y5S2 1711 aa3.68□□□□□ -1.82
SMARCE1-219ENST00000583294 CLRN2A0PK11 232 aa3.68□□□□□ -1.82
SMARCE1-219ENST00000583294 RIPK2O43353 540 aa3.68□□□□□ -1.82
SMARCE1-219ENST00000583294 MOSP00540 346 aa3.68□□□□□ -1.82
SMARCE1-219ENST00000583294 RPS10P46783 165 aaKnown RBP3.68□□□□□ -1.82
SMARCE1-219ENST00000583294 CRYBB1P53674 252 aaPredicted RBP3.68□□□□□ -1.82
SMARCE1-219ENST00000583294 SH3BGRP55822 239 aaPredicted RBP3.68□□□□□ -1.82
SMARCE1-219ENST00000583294 TNFRSF17Q02223 184 aa3.68□□□□□ -1.82
SMARCE1-219ENST00000583294 PDIA2Q13087 525 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms