RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 SLC35G5Q96KT7 338 aa11.85□□□□□ -0.51
SS18-222ENST00000582792 SLC35A5Q9BS91 424 aa11.85□□□□□ -0.51
SS18-222ENST00000582792 OR11A1Q9GZK7 315 aa11.85□□□□□ -0.51
SS18-222ENST00000582792 PAIP1Q9H074 479 aaKnown RBP11.85□□□□□ -0.51
SS18-222ENST00000582792 MYLK2Q9H1R3 596 aa11.85□□□□□ -0.51
SS18-222ENST00000582792 RAD21L1Q9H4I0 556 aa11.85□□□□□ -0.51
SS18-222ENST00000582792 MYOZ1Q9NP98 299 aaPredicted RBP11.85□□□□□ -0.51
SS18-222ENST00000582792 SLC7A10Q9NS82 523 aa11.85□□□□□ -0.51
SS18-222ENST00000582792 PARPBPQ9NWS1 579 aa11.85□□□□□ -0.51
SS18-222ENST00000582792 UPB1Q9UBR1 384 aa11.85□□□□□ -0.51
SS18-222ENST00000582792 TRAPPC4Q9Y296 219 aa11.85□□□□□ -0.51
SS18-222ENST00000582792 SLC35A3Q9Y2D2 325 aa11.85□□□□□ -0.51
SS18-222ENST00000582792 NDUFAF1Q9Y375 327 aa11.85□□□□□ -0.51
SS18-222ENST00000582792 CAPN7Q9Y6W3 813 aa11.85□□□□□ -0.51
SS18-222ENST00000582792 LOC390937A0A1W2PQ73 354 aa11.84□□□□□ -0.51
SS18-222ENST00000582792 KIAA0513O60268 411 aa11.84□□□□□ -0.51
SS18-222ENST00000582792 BCAS1O75363 584 aaPredicted RBP11.84□□□□□ -0.51
SS18-222ENST00000582792 ANP32DO95626 131 aa11.84□□□□□ -0.51
SS18-222ENST00000582792 NPPAP01160 153 aa11.84□□□□□ -0.51
SS18-222ENST00000582792 PPIBP23284 216 aaKnown RBP11.84□□□□□ -0.51
SS18-222ENST00000582792 CHI3L1P36222 383 aaPredicted RBP11.84□□□□□ -0.51
SS18-222ENST00000582792 CDKN2CP42773 168 aa11.84□□□□□ -0.51
SS18-222ENST00000582792 OR2B6P58173 313 aa11.84□□□□□ -0.51
SS18-222ENST00000582792 TGFBR3Q03167 851 aa11.84□□□□□ -0.51
SS18-222ENST00000582792 SF3A3Q12874 501 aaKnown RBP eCLIP11.84□□□□□ -0.51
SS18-222ENST00000582792 AP1ARQ63HQ0 302 aa11.84□□□□□ -0.51
SS18-222ENST00000582792 SLC2A7Q6PXP3 512 aa11.84□□□□□ -0.51
SS18-222ENST00000582792 C16orf62Q7Z3J2 963 aa11.84□□□□□ -0.51
SS18-222ENST00000582792 ADGRG3Q86Y34 549 aa11.84□□□□□ -0.51
SS18-222ENST00000582792 RP9Q8TA86 221 aaKnown RBP11.84□□□□□ -0.51
SS18-222ENST00000582792 C3orf49Q96BT1 292 aa11.84□□□□□ -0.51
SS18-222ENST00000582792 FOXN4Q96NZ1 517 aa11.84□□□□□ -0.51
SS18-222ENST00000582792 THUMPD1Q9NXG2 353 aaKnown RBP11.84□□□□□ -0.51
SS18-222ENST00000582792 TMEM181Q9P2C4 612 aa11.84□□□□□ -0.51
SS18-222ENST00000582792 MOKQ9UQ07 419 aa11.84□□□□□ -0.51
SS18-222ENST00000582792 SLC9A8Q9Y2E8 581 aa11.84□□□□□ -0.51
SS18-222ENST00000582792 FLVCR1Q9Y5Y0 555 aa11.84□□□□□ -0.51
SS18-222ENST00000582792 TRBV5-3A0A0A0MS03 114 aa11.83□□□□□ -0.52
SS18-222ENST00000582792 ANGPT2O15123 496 aa11.83□□□□□ -0.52
SS18-222ENST00000582792 EIF1BO60739 113 aaKnown RBP11.83□□□□□ -0.52
SS18-222ENST00000582792 WNT11O96014 354 aa11.83□□□□□ -0.52
SS18-222ENST00000582792 TGFAP01135 160 aa11.83□□□□□ -0.52
SS18-222ENST00000582792 ZNF23P17027 643 aa11.83□□□□□ -0.52
SS18-222ENST00000582792 MPGP29372 298 aa11.83□□□□□ -0.52
SS18-222ENST00000582792 PRDX6P30041 224 aa11.83□□□□□ -0.52
SS18-222ENST00000582792 RYKP34925 604 aa11.83□□□□□ -0.52
SS18-222ENST00000582792 KHKP50053 298 aa11.83□□□□□ -0.52
SS18-222ENST00000582792 PRPS1P60891 318 aa11.83□□□□□ -0.52
SS18-222ENST00000582792 SNRPD2P62316 118 aaKnown RBP11.83□□□□□ -0.52
SS18-222ENST00000582792 SLC17A1Q14916 467 aa11.83□□□□□ -0.52
SS18-222ENST00000582792 PAGE3Q5JUK9 113 aa11.83□□□□□ -0.52
SS18-222ENST00000582792 C6orf10Q5SRN2 563 aa11.83□□□□□ -0.52
SS18-222ENST00000582792 TSPO2Q5TGU0 170 aa11.83□□□□□ -0.52
SS18-222ENST00000582792 GKAP1Q5VSY0 366 aaPredicted RBP11.83□□□□□ -0.52
SS18-222ENST00000582792 FAM91A1Q658Y4 838 aa11.83□□□□□ -0.52
SS18-222ENST00000582792 TYW3Q6IPR3 259 aaKnown RBP11.83□□□□□ -0.52
SS18-222ENST00000582792 KLHL24Q6TFL4 600 aa11.83□□□□□ -0.52
SS18-222ENST00000582792 CLEC4FQ8N1N0 589 aa11.83□□□□□ -0.52
SS18-222ENST00000582792 OR51I1Q9H343 314 aa11.83□□□□□ -0.52
SS18-222ENST00000582792 TPT1P8Q9HAU6 139 aa11.83□□□□□ -0.52
SS18-222ENST00000582792 EXOSC3Q9NQT5 275 aaKnown RBP11.83□□□□□ -0.52
SS18-222ENST00000582792 POLE3Q9NRF9 147 aa11.83□□□□□ -0.52
SS18-222ENST00000582792 EXD2Q9NVH0 621 aa11.83□□□□□ -0.52
SS18-222ENST00000582792 PCDHB14Q9Y5E9 798 aa11.83□□□□□ -0.52
SS18-222ENST00000582792 DCTN3O75935 186 aa11.82□□□□□ -0.52
SS18-222ENST00000582792 GSNP06396 782 aa11.82□□□□□ -0.52
SS18-222ENST00000582792 SLC35A1P78382 337 aa11.82□□□□□ -0.52
SS18-222ENST00000582792 PLAURQ03405 335 aa11.82□□□□□ -0.52
SS18-222ENST00000582792 FADDQ13158 208 aa11.82□□□□□ -0.52
SS18-222ENST00000582792 CYLC2Q14093 348 aaPredicted RBP11.82□□□□□ -0.52
SS18-222ENST00000582792 CARTPTQ16568 116 aa11.82□□□□□ -0.52
SS18-222ENST00000582792 CR1LQ2VPA4 569 aa11.82□□□□□ -0.52
SS18-222ENST00000582792 IQCCQ4KMZ1 466 aa11.82□□□□□ -0.52
SS18-222ENST00000582792 DLEU7Q6UYE1 221 aa11.82□□□□□ -0.52
SS18-222ENST00000582792 RFLNBQ8N5W9 214 aa11.82□□□□□ -0.52
SS18-222ENST00000582792 PCYOX1LQ8NBM8 494 aa11.82□□□□□ -0.52
SS18-222ENST00000582792 ZNF540Q8NDQ6 660 aa11.82□□□□□ -0.52
SS18-222ENST00000582792 PMM1Q92871 262 aa11.82□□□□□ -0.52
SS18-222ENST00000582792 BOD1Q96IK1 185 aa11.82□□□□□ -0.52
SS18-222ENST00000582792 NAA11Q9BSU3 229 aaPredicted RBP11.82□□□□□ -0.52
SS18-222ENST00000582792 SOX7Q9BT81 388 aa11.82□□□□□ -0.52
SS18-222ENST00000582792 BPESC1Q9GZL8 116 aa11.82□□□□□ -0.52
SS18-222ENST00000582792 SAP130Q9H0E3 1048 aa11.82□□□□□ -0.52
SS18-222ENST00000582792 CORO2BQ9UQ03 480 aa11.82□□□□□ -0.52
SS18-222ENST00000582792 WDR45Q9Y484 360 aa11.82□□□□□ -0.52
SS18-222ENST00000582792 MEGF8Q7Z7M0 2845 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 TMED7-TICAM2A0A0A6YYA0 188 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 IGHV1-18A0A0C4DH31 117 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 CLIC1O00299 241 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 ZNF208O43345 1280 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 TCF21O43680 179 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 PDE5AO76074 875 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 OR12D1P0DN82 309 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 IMPDH2P12268 514 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 BMP2P12643 396 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 CCNA2P20248 432 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 SERPINF1P36955 418 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 HTR3AP46098 478 aa11.81□□□□□ -0.52
SS18-222ENST00000582792 IDH2P48735 452 aaKnown RBP11.81□□□□□ -0.52
SS18-222ENST00000582792 MVDP53602 400 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms