RNA–Protein interactions for RNA: ENST00000582653.1

SHMT1-209, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 3

Gene SHMT1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-209ENST00000582653 TLX2O43763 284 aaPredicted RBP17.93■□□□□ 0.46
SHMT1-209ENST00000582653 SSX4O60224 188 aa17.93■□□□□ 0.46
SHMT1-209ENST00000582653 IRX1P78414 480 aaPredicted RBP17.93■□□□□ 0.46
SHMT1-209ENST00000582653 TGFBR3Q03167 851 aa17.93■□□□□ 0.46
SHMT1-209ENST00000582653 LGALS3BPQ08380 585 aa17.93■□□□□ 0.46
SHMT1-209ENST00000582653 AGKQ53H12 422 aa17.93■□□□□ 0.46
SHMT1-209ENST00000582653 PRAMEF8Q5VWM4 474 aa17.93■□□□□ 0.46
SHMT1-209ENST00000582653 PRAMEF7Q5VXH5 474 aa17.93■□□□□ 0.46
SHMT1-209ENST00000582653 C11orf71Q6IPW1 123 aa17.93■□□□□ 0.46
SHMT1-209ENST00000582653 B3GLCTQ6Y288 498 aa17.93■□□□□ 0.46
SHMT1-209ENST00000582653 CREB3L2Q70SY1 520 aa17.93■□□□□ 0.46
SHMT1-209ENST00000582653 KDM8Q8N371 416 aa17.93■□□□□ 0.46
SHMT1-209ENST00000582653 MUC15Q8N387 334 aa17.93■□□□□ 0.46
SHMT1-209ENST00000582653 C17orf78Q8N4C9 275 aa17.93■□□□□ 0.46
SHMT1-209ENST00000582653 C1orf162Q8NEQ5 155 aaPredicted RBP17.93■□□□□ 0.46
SHMT1-209ENST00000582653 DYDC1Q8WWB3 177 aa17.93■□□□□ 0.46
SHMT1-209ENST00000582653 SLC25A36Q96CQ1 311 aa17.93■□□□□ 0.46
SHMT1-209ENST00000582653 THOC1Q96FV9 657 aaKnown RBP17.93■□□□□ 0.46
SHMT1-209ENST00000582653 PRR14Q9BWN1 585 aa17.93■□□□□ 0.46
SHMT1-209ENST00000582653 IKZF5Q9H5V7 419 aa17.93■□□□□ 0.46
SHMT1-209ENST00000582653 PIF1Q9H611 641 aa17.93■□□□□ 0.46
SHMT1-209ENST00000582653 CD5LO43866 347 aa17.92■□□□□ 0.46
SHMT1-209ENST00000582653 TPST1O60507 370 aa17.92■□□□□ 0.46
SHMT1-209ENST00000582653 ARAFP10398 606 aa17.92■□□□□ 0.46
SHMT1-209ENST00000582653 MPGP29372 298 aa17.92■□□□□ 0.46
SHMT1-209ENST00000582653 RPS5P46782 204 aaKnown RBP17.92■□□□□ 0.46
SHMT1-209ENST00000582653 SELENOPP49908 381 aa17.92■□□□□ 0.46
SHMT1-209ENST00000582653 EGR4Q05215 589 aa17.92■□□□□ 0.46
SHMT1-209ENST00000582653 GLIPR1L2Q4G1C9 344 aa17.92■□□□□ 0.46
SHMT1-209ENST00000582653 GCNT6Q5T4J0 391 aa17.92■□□□□ 0.46
SHMT1-209ENST00000582653 EPHX4Q8IUS5 362 aa17.92■□□□□ 0.46
SHMT1-209ENST00000582653 FBXL14Q8N1E6 418 aa17.92■□□□□ 0.46
SHMT1-209ENST00000582653 OR10H5Q8NGA6 315 aa17.92■□□□□ 0.46
SHMT1-209ENST00000582653 STK35Q8TDR2 534 aa17.92■□□□□ 0.46
SHMT1-209ENST00000582653 KTI12Q96EK9 354 aaPredicted RBP17.92■□□□□ 0.46
SHMT1-209ENST00000582653 BOD1Q96IK1 185 aa17.92■□□□□ 0.46
SHMT1-209ENST00000582653 PTDSS2Q9BVG9 487 aa17.92■□□□□ 0.46
SHMT1-209ENST00000582653 CACNG6Q9BXT2 260 aa17.92■□□□□ 0.46
SHMT1-209ENST00000582653 AMDHD2Q9Y303 409 aa17.92■□□□□ 0.46
SHMT1-209ENST00000582653 FTCDNL1E5RQL4 147 aa17.91■□□□□ 0.46
SHMT1-209ENST00000582653 AHSA1O95433 338 aa17.91■□□□□ 0.46
SHMT1-209ENST00000582653 ETS2P15036 469 aa17.91■□□□□ 0.46
SHMT1-209ENST00000582653 FABP6P51161 128 aa17.91■□□□□ 0.46
SHMT1-209ENST00000582653 DSCR9P59020 149 aa17.91■□□□□ 0.46
SHMT1-209ENST00000582653 CDK6Q00534 326 aa17.91■□□□□ 0.46
SHMT1-209ENST00000582653 RAB35Q15286 201 aa17.91■□□□□ 0.46
SHMT1-209ENST00000582653 HIKESHIQ53FT3 197 aa17.91■□□□□ 0.46
SHMT1-209ENST00000582653 ZNF544Q6NX49 715 aa17.91■□□□□ 0.46
SHMT1-209ENST00000582653 MFSD8Q8NHS3 518 aa17.91■□□□□ 0.46
SHMT1-209ENST00000582653 SEC14L4Q9UDX3 406 aa17.91■□□□□ 0.46
SHMT1-209ENST00000582653 TRBV5-3A0A0A0MS03 114 aa17.9■□□□□ 0.46
SHMT1-209ENST00000582653 ELOA3DA6NLF2 546 aaPredicted RBP17.9■□□□□ 0.46
SHMT1-209ENST00000582653 KRT33AO76009 404 aa17.9■□□□□ 0.46
SHMT1-209ENST00000582653 PNMTP11086 282 aa17.9■□□□□ 0.46
SHMT1-209ENST00000582653 HTR2AP28223 471 aa17.9■□□□□ 0.46
SHMT1-209ENST00000582653 PRKAR1BP31321 381 aa17.9■□□□□ 0.46
SHMT1-209ENST00000582653 NUDT6P53370 316 aa17.9■□□□□ 0.46
SHMT1-209ENST00000582653 ELOA3BQ3SY89 546 aa17.9■□□□□ 0.46
SHMT1-209ENST00000582653 REEP3Q6NUK4 255 aa17.9■□□□□ 0.46
SHMT1-209ENST00000582653 LINGO2Q7L985 606 aa17.9■□□□□ 0.46
SHMT1-209ENST00000582653 HIPK1Q86Z02 1210 aa17.9■□□□□ 0.46
SHMT1-209ENST00000582653 POMGNT2Q8NAT1 580 aa17.9■□□□□ 0.46
SHMT1-209ENST00000582653 ELOA3Q8NG57 546 aa17.9■□□□□ 0.46
SHMT1-209ENST00000582653 HTRA1Q92743 480 aa17.9■□□□□ 0.46
SHMT1-209ENST00000582653 SLC35B4Q969S0 331 aa17.9■□□□□ 0.46
SHMT1-209ENST00000582653 INTS9Q9NV88 658 aaKnown RBP17.9■□□□□ 0.46
SHMT1-209ENST00000582653 RPS6KB2Q9UBS0 482 aa17.9■□□□□ 0.46
SHMT1-209ENST00000582653 RASD1Q9Y272 281 aa17.9■□□□□ 0.46
SHMT1-209ENST00000582653 A0A1B0GWA3 101 aa17.89■□□□□ 0.45
SHMT1-209ENST00000582653 UPK3AO75631 287 aa17.89■□□□□ 0.45
SHMT1-209ENST00000582653 VAMP5O95183 116 aa17.89■□□□□ 0.45
SHMT1-209ENST00000582653 LGI1O95970 557 aa17.89■□□□□ 0.45
SHMT1-209ENST00000582653 BMP4P12644 408 aa17.89■□□□□ 0.45
SHMT1-209ENST00000582653 AQP1P29972 269 aa17.89■□□□□ 0.45
SHMT1-209ENST00000582653 APOBEC3AP31941 199 aaPredicted RBP17.89■□□□□ 0.45
SHMT1-209ENST00000582653 PRPS1P60891 318 aa17.89■□□□□ 0.45
SHMT1-209ENST00000582653 SQLEQ14534 574 aa17.89■□□□□ 0.45
SHMT1-209ENST00000582653 NIPAL3Q6P499 406 aa17.89■□□□□ 0.45
SHMT1-209ENST00000582653 TAAR8Q969N4 342 aa17.89■□□□□ 0.45
SHMT1-209ENST00000582653 WFDC6Q9BQY6 131 aa17.89■□□□□ 0.45
SHMT1-209ENST00000582653 FKRPQ9H9S5 495 aa17.89■□□□□ 0.45
SHMT1-209ENST00000582653 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.89■□□□□ 0.45
SHMT1-209ENST00000582653 ATP23Q9Y6H3 246 aa17.89■□□□□ 0.45
SHMT1-209ENST00000582653 IGHV4-30-2A0A087WSY4 118 aa17.88■□□□□ 0.45
SHMT1-209ENST00000582653 H7C417 338 aa17.88■□□□□ 0.45
SHMT1-209ENST00000582653 WNT11O96014 354 aa17.88■□□□□ 0.45
SHMT1-209ENST00000582653 GPX2P18283 190 aa17.88■□□□□ 0.45
SHMT1-209ENST00000582653 CBLP22681 906 aa17.88■□□□□ 0.45
SHMT1-209ENST00000582653 PPIBP23284 216 aaKnown RBP17.88■□□□□ 0.45
SHMT1-209ENST00000582653 ATP4BP51164 291 aa17.88■□□□□ 0.45
SHMT1-209ENST00000582653 SCARB2Q14108 478 aa17.88■□□□□ 0.45
SHMT1-209ENST00000582653 ADRM1Q16186 407 aa17.88■□□□□ 0.45
SHMT1-209ENST00000582653 DHRS4L2Q6PKH6 230 aa17.88■□□□□ 0.45
SHMT1-209ENST00000582653 DLEU7Q6UYE1 221 aa17.88■□□□□ 0.45
SHMT1-209ENST00000582653 LSMEM1Q8N8F7 131 aa17.88■□□□□ 0.45
SHMT1-209ENST00000582653 SPATA3Q8NHX4 192 aa17.88■□□□□ 0.45
SHMT1-209ENST00000582653 CKAP2Q8WWK9 683 aa17.88■□□□□ 0.45
SHMT1-209ENST00000582653 ALKBH3Q96Q83 286 aaPredicted RBP17.88■□□□□ 0.45
SHMT1-209ENST00000582653 YAE1D1Q9NRH1 226 aa17.88■□□□□ 0.45
SHMT1-209ENST00000582653 TMEM45AQ9NWC5 275 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms