RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 AURKBQ96GD4 344 aaPredicted RBP18.42■□□□□ 0.54
CCDC42-203ENST00000581598 MUS81Q96NY9 551 aa18.42■□□□□ 0.54
CCDC42-203ENST00000581598 AMBRA1Q9C0C7 1298 aa18.42■□□□□ 0.54
CCDC42-203ENST00000581598 LRMDAQ9H2I8 198 aa18.42■□□□□ 0.54
CCDC42-203ENST00000581598 PIF1Q9H611 641 aa18.42■□□□□ 0.54
CCDC42-203ENST00000581598 NANOGQ9H9S0 305 aa18.42■□□□□ 0.54
CCDC42-203ENST00000581598 PARPBPQ9NWS1 579 aa18.42■□□□□ 0.54
CCDC42-203ENST00000581598 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.42■□□□□ 0.54
CCDC42-203ENST00000581598 MGAT4BQ9UQ53 548 aa18.42■□□□□ 0.54
CCDC42-203ENST00000581598 MAGED1Q9Y5V3 778 aaPredicted RBP18.42■□□□□ 0.54
CCDC42-203ENST00000581598 CIB4A0PJX0 185 aa18.41■□□□□ 0.54
CCDC42-203ENST00000581598 ZC3H12DA2A288 527 aaKnown RBP18.41■□□□□ 0.54
CCDC42-203ENST00000581598 RAD51DO75771 328 aa18.41■□□□□ 0.54
CCDC42-203ENST00000581598 IGHV3-9P01782 118 aa18.41■□□□□ 0.54
CCDC42-203ENST00000581598 PPIBP23284 216 aaKnown RBP18.41■□□□□ 0.54
CCDC42-203ENST00000581598 ACAA2P42765 397 aaKnown RBP18.41■□□□□ 0.54
CCDC42-203ENST00000581598 CRATP43155 626 aa18.41■□□□□ 0.54
CCDC42-203ENST00000581598 DNAL1Q4LDG9 190 aa18.41■□□□□ 0.54
CCDC42-203ENST00000581598 OR7E24Q6IFN5 339 aa18.41■□□□□ 0.54
CCDC42-203ENST00000581598 ZNF836Q6ZNA1 936 aa18.41■□□□□ 0.54
CCDC42-203ENST00000581598 VRK2Q86Y07 508 aa18.41■□□□□ 0.54
CCDC42-203ENST00000581598 TMEM45BQ96B21 275 aa18.41■□□□□ 0.54
CCDC42-203ENST00000581598 DNAJA3Q96EY1 480 aa18.41■□□□□ 0.54
CCDC42-203ENST00000581598 BTBD10Q9BSF8 475 aa18.41■□□□□ 0.54
CCDC42-203ENST00000581598 TRAF4Q9BUZ4 470 aaPredicted RBP18.41■□□□□ 0.54
CCDC42-203ENST00000581598 SF3B5Q9BWJ5 86 aaKnown RBP18.41■□□□□ 0.54
CCDC42-203ENST00000581598 IKZF5Q9H5V7 419 aa18.41■□□□□ 0.54
CCDC42-203ENST00000581598 RLIMQ9NVW2 624 aa18.41■□□□□ 0.54
CCDC42-203ENST00000581598 CISD1Q9NZ45 108 aaKnown RBP18.41■□□□□ 0.54
CCDC42-203ENST00000581598 ABCD2Q9UBJ2 740 aa18.41■□□□□ 0.54
CCDC42-203ENST00000581598 SLC25A15Q9Y619 301 aa18.41■□□□□ 0.54
CCDC42-203ENST00000581598 A0A0G2JPF8 293 aa18.4■□□□□ 0.54
CCDC42-203ENST00000581598 HNRNPCL2B2RXH8 293 aa18.4■□□□□ 0.54
CCDC42-203ENST00000581598 HNRNPCL3B7ZW38 293 aa18.4■□□□□ 0.54
CCDC42-203ENST00000581598 CLIC1O00299 241 aa18.4■□□□□ 0.54
CCDC42-203ENST00000581598 ABCD4O14678 606 aa18.4■□□□□ 0.54
CCDC42-203ENST00000581598 BCHEP06276 602 aa18.4■□□□□ 0.54
CCDC42-203ENST00000581598 ITGA5P08648 1049 aa18.4■□□□□ 0.54
CCDC42-203ENST00000581598 HNRNPCL4P0DMR1 293 aa18.4■□□□□ 0.54
CCDC42-203ENST00000581598 PTAFRP25105 342 aa18.4■□□□□ 0.54
CCDC42-203ENST00000581598 IDUAP35475 653 aa18.4■□□□□ 0.54
CCDC42-203ENST00000581598 GABRA6Q16445 453 aa18.4■□□□□ 0.54
CCDC42-203ENST00000581598 PRAMEF8Q5VWM4 474 aa18.4■□□□□ 0.54
CCDC42-203ENST00000581598 PRAMEF7Q5VXH5 474 aa18.4■□□□□ 0.54
CCDC42-203ENST00000581598 WBP2NLQ6ICG8 309 aa18.4■□□□□ 0.54
CCDC42-203ENST00000581598 TMEM108Q6UXF1 575 aa18.4■□□□□ 0.54
CCDC42-203ENST00000581598 ASRGL1Q7L266 308 aa18.4■□□□□ 0.54
CCDC42-203ENST00000581598 SLC15A3Q8IY34 581 aa18.4■□□□□ 0.54
CCDC42-203ENST00000581598 DEFB107AQ8IZN7 70 aa18.4■□□□□ 0.54
CCDC42-203ENST00000581598 C1orf162Q8NEQ5 155 aaPredicted RBP18.4■□□□□ 0.54
CCDC42-203ENST00000581598 FAIMQ9NVQ4 179 aa18.4■□□□□ 0.54
CCDC42-203ENST00000581598 ZNF443Q9Y2A4 671 aaPredicted RBP18.4■□□□□ 0.54
CCDC42-203ENST00000581598 TMEM247A6NEH6 219 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 LIPT2A6NK58 231 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 GYG2O15488 501 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 CD8AP01732 235 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 GPIP06744 558 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 GKN3PP0CG01 181 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 BMP2P12643 396 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 GPX2P18283 190 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 CXCR1P25024 350 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 COPZ1P61923 177 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 FAPQ12884 760 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 TNK1Q13470 666 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 SELPLGQ14242 412 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 LARS2Q15031 903 aaKnown RBP18.39■□□□□ 0.53
CCDC42-203ENST00000581598 CLEC12BQ2HXU8 276 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 RABL3Q5HYI8 236 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 KLHL17Q6TDP4 642 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 CASP12Q6UXS9 341 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 C17orf78Q8N4C9 275 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 SLC35B4Q969S0 331 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 GTPBP3Q969Y2 492 aaKnown RBP18.39■□□□□ 0.53
CCDC42-203ENST00000581598 TMEM19Q96HH6 336 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 SH3GL1Q99961 368 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 SPATA9Q9BWV2 254 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 ALG2Q9H553 416 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 ARMC7Q9H6L4 198 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 BCL2L10Q9HD36 194 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 SPAG4Q9NPE6 437 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 CMTM6Q9NX76 183 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 ZNF232Q9UNY5 417 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 CORO2BQ9UQ03 480 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 AP3M1Q9Y2T2 418 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 IFT52Q9Y366 437 aa18.39■□□□□ 0.53
CCDC42-203ENST00000581598 ZANQ9Y493 2812 aa18.38■□□□□ 0.53
CCDC42-203ENST00000581598 SLC7A2P52569 658 aa18.38■□□□□ 0.53
CCDC42-203ENST00000581598 CDH11P55287 796 aa18.38■□□□□ 0.53
CCDC42-203ENST00000581598 MTPNP58546 118 aa18.38■□□□□ 0.53
CCDC42-203ENST00000581598 FADDQ13158 208 aa18.38■□□□□ 0.53
CCDC42-203ENST00000581598 OTUD3Q5T2D3 398 aaPredicted RBP18.38■□□□□ 0.53
CCDC42-203ENST00000581598 OR52N5Q8NH56 324 aa18.38■□□□□ 0.53
CCDC42-203ENST00000581598 BOD1Q96IK1 185 aa18.38■□□□□ 0.53
CCDC42-203ENST00000581598 RAD21L1Q9H4I0 556 aa18.38■□□□□ 0.53
CCDC42-203ENST00000581598 KAT8Q9H7Z6 458 aaKnown RBP18.38■□□□□ 0.53
CCDC42-203ENST00000581598 SLC7A10Q9NS82 523 aa18.38■□□□□ 0.53
CCDC42-203ENST00000581598 PRPF19Q9UMS4 504 aaKnown RBP18.38■□□□□ 0.53
CCDC42-203ENST00000581598 CHST2Q9Y4C5 530 aa18.38■□□□□ 0.53
CCDC42-203ENST00000581598 HEATR1Q9H583 2144 aaKnown RBP18.38■□□□□ 0.53
CCDC42-203ENST00000581598 AQP7P3A6NL99 342 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms