RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 NIPAL3Q6P499 406 aa11.83□□□□□ -0.52
CSNK1D-213ENST00000580446 Q6YL49 198 aa11.83□□□□□ -0.52
CSNK1D-213ENST00000580446 ABHD12BQ7Z5M8 362 aaPredicted RBP11.83□□□□□ -0.52
CSNK1D-213ENST00000580446 CTAGE3PQ8IX95 158 aa11.83□□□□□ -0.52
CSNK1D-213ENST00000580446 C1orf174Q8IYL3 243 aa11.83□□□□□ -0.52
CSNK1D-213ENST00000580446 RHEBL1Q8TAI7 183 aa11.83□□□□□ -0.52
CSNK1D-213ENST00000580446 CPNE1Q99829 537 aa11.83□□□□□ -0.52
CSNK1D-213ENST00000580446 LAT2Q9GZY6 243 aa11.83□□□□□ -0.52
CSNK1D-213ENST00000580446 TMEM181Q9P2C4 612 aa11.83□□□□□ -0.52
CSNK1D-213ENST00000580446 GRID1Q9ULK0 1009 aa11.83□□□□□ -0.52
CSNK1D-213ENST00000580446 HDGFL3Q9Y3E1 203 aa11.83□□□□□ -0.52
CSNK1D-213ENST00000580446 POLR3HQ9Y535 204 aaPredicted RBP11.83□□□□□ -0.52
CSNK1D-213ENST00000580446 STAB2Q8WWQ8 2551 aa11.82□□□□□ -0.52
CSNK1D-213ENST00000580446 ZNF500O60304 480 aaPredicted RBP11.82□□□□□ -0.52
CSNK1D-213ENST00000580446 IGHV4-59P01825 116 aa11.82□□□□□ -0.52
CSNK1D-213ENST00000580446 SBK2P0C263 348 aa11.82□□□□□ -0.52
CSNK1D-213ENST00000580446 CD79AP11912 226 aa11.82□□□□□ -0.52
CSNK1D-213ENST00000580446 LCN1P31025 176 aa11.82□□□□□ -0.52
CSNK1D-213ENST00000580446 ATP12AP54707 1039 aa11.82□□□□□ -0.52
CSNK1D-213ENST00000580446 PCBP3P57721 371 aaKnown RBP11.82□□□□□ -0.52
CSNK1D-213ENST00000580446 SLC35A1P78382 337 aa11.82□□□□□ -0.52
CSNK1D-213ENST00000580446 LASP1Q14847 261 aaKnown RBP11.82□□□□□ -0.52
CSNK1D-213ENST00000580446 FXNQ16595 210 aa11.82□□□□□ -0.52
CSNK1D-213ENST00000580446 ZNF385BQ569K4 471 aa11.82□□□□□ -0.52
CSNK1D-213ENST00000580446 SPRNQ5BIV9 151 aa11.82□□□□□ -0.52
CSNK1D-213ENST00000580446 DCST2Q5T1A1 773 aa11.82□□□□□ -0.52
CSNK1D-213ENST00000580446 HMGN2P46Q86SG4 172 aa11.82□□□□□ -0.52
CSNK1D-213ENST00000580446 MAGEE2Q8TD90 523 aaPredicted RBP11.82□□□□□ -0.52
CSNK1D-213ENST00000580446 GPR78Q96P69 363 aa11.82□□□□□ -0.52
CSNK1D-213ENST00000580446 DECR2Q9NUI1 292 aa11.82□□□□□ -0.52
CSNK1D-213ENST00000580446 EGFL7Q9UHF1 273 aa11.82□□□□□ -0.52
CSNK1D-213ENST00000580446 KCNE5Q9UJ90 142 aa11.82□□□□□ -0.52
CSNK1D-213ENST00000580446 ZNF346Q9UL40 294 aaKnown RBP11.82□□□□□ -0.52
CSNK1D-213ENST00000580446 TET2Q6N021 2002 aaPredicted RBP11.81□□□□□ -0.52
CSNK1D-213ENST00000580446 TMEM72A0PK05 275 aa11.81□□□□□ -0.52
CSNK1D-213ENST00000580446 NPIPB9F8W1W9 429 aa11.81□□□□□ -0.52
CSNK1D-213ENST00000580446 PDPK1O15530 556 aa11.81□□□□□ -0.52
CSNK1D-213ENST00000580446 EIF4E2O60573 245 aaKnown RBP11.81□□□□□ -0.52
CSNK1D-213ENST00000580446 FAM157BP0CG42 384 aa11.81□□□□□ -0.52
CSNK1D-213ENST00000580446 ZNF35P13682 527 aa11.81□□□□□ -0.52
CSNK1D-213ENST00000580446 CRABP2P29373 138 aa11.81□□□□□ -0.52
CSNK1D-213ENST00000580446 PAX8Q06710 450 aa11.81□□□□□ -0.52
CSNK1D-213ENST00000580446 ZNF763Q0D2J5 394 aa11.81□□□□□ -0.52
CSNK1D-213ENST00000580446 TRMT5Q32P41 509 aaKnown RBP11.81□□□□□ -0.52
CSNK1D-213ENST00000580446 SPIN4Q56A73 249 aa11.81□□□□□ -0.52
CSNK1D-213ENST00000580446 ZNF563Q8TA94 476 aa11.81□□□□□ -0.52
CSNK1D-213ENST00000580446 EGLN2Q96KS0 407 aa11.81□□□□□ -0.52
CSNK1D-213ENST00000580446 NAA11Q9BSU3 229 aaPredicted RBP11.81□□□□□ -0.52
CSNK1D-213ENST00000580446 NMUR2Q9GZQ4 415 aa11.81□□□□□ -0.52
CSNK1D-213ENST00000580446 SAP30LQ9HAJ7 183 aa11.81□□□□□ -0.52
CSNK1D-213ENST00000580446 TRIM33Q9UPN9 1127 aa11.81□□□□□ -0.52
CSNK1D-213ENST00000580446 SPIN1Q9Y657 262 aaPredicted RBP11.81□□□□□ -0.52
CSNK1D-213ENST00000580446 ZNF816-ZNF321PA0A0X1KG74 233 aa11.8□□□□□ -0.52
CSNK1D-213ENST00000580446 AGAP5A6NIR3 686 aa11.8□□□□□ -0.52
CSNK1D-213ENST00000580446 DNPH1O43598 174 aa11.8□□□□□ -0.52
CSNK1D-213ENST00000580446 ZNF432O94892 652 aa11.8□□□□□ -0.52
CSNK1D-213ENST00000580446 OTCP00480 354 aa11.8□□□□□ -0.52
CSNK1D-213ENST00000580446 HMGN2P05204 90 aaKnown RBP11.8□□□□□ -0.52
CSNK1D-213ENST00000580446 C2P06681 752 aa11.8□□□□□ -0.52
CSNK1D-213ENST00000580446 THRBP10828 461 aa11.8□□□□□ -0.52
CSNK1D-213ENST00000580446 GALK2Q01415 458 aa11.8□□□□□ -0.52
CSNK1D-213ENST00000580446 FAM83EQ2M2I3 478 aa11.8□□□□□ -0.52
CSNK1D-213ENST00000580446 DMRTC1Q5HYR2 192 aa11.8□□□□□ -0.52
CSNK1D-213ENST00000580446 SPDYAQ5MJ70 313 aa11.8□□□□□ -0.52
CSNK1D-213ENST00000580446 EXOSC6Q5RKV6 272 aaKnown RBP11.8□□□□□ -0.52
CSNK1D-213ENST00000580446 GRK7Q8WTQ7 553 aa11.8□□□□□ -0.52
CSNK1D-213ENST00000580446 TMEM234Q8WY98 164 aa11.8□□□□□ -0.52
CSNK1D-213ENST00000580446 UPRTQ96BW1 309 aa11.8□□□□□ -0.52
CSNK1D-213ENST00000580446 MRRFQ96E11 262 aaKnown RBP11.8□□□□□ -0.52
CSNK1D-213ENST00000580446 LZTFL1Q9NQ48 299 aa11.8□□□□□ -0.52
CSNK1D-213ENST00000580446 TAS2R7Q9NYW3 318 aa11.8□□□□□ -0.52
CSNK1D-213ENST00000580446 FOXJ3Q9UPW0 622 aa11.8□□□□□ -0.52
CSNK1D-213ENST00000580446 SIGLEC9Q9Y336 463 aa11.8□□□□□ -0.52
CSNK1D-213ENST00000580446 LCE6AA0A183 80 aa11.79□□□□□ -0.52
CSNK1D-213ENST00000580446 TCRBV9S1A1TA0A576 114 aa11.79□□□□□ -0.52
CSNK1D-213ENST00000580446 SPRY3O43610 288 aa11.79□□□□□ -0.52
CSNK1D-213ENST00000580446 CSTAP01040 98 aa11.79□□□□□ -0.52
CSNK1D-213ENST00000580446 RPS17P08708 135 aaKnown RBP11.79□□□□□ -0.52
CSNK1D-213ENST00000580446 OR8G3PP0DMU2 310 aa11.79□□□□□ -0.52
CSNK1D-213ENST00000580446 UROSP10746 265 aa11.79□□□□□ -0.52
CSNK1D-213ENST00000580446 TYK2P29597 1187 aa11.79□□□□□ -0.52
CSNK1D-213ENST00000580446 SPRP35270 261 aaPredicted RBP11.79□□□□□ -0.52
CSNK1D-213ENST00000580446 APOBEC1P41238 236 aaKnown RBP11.79□□□□□ -0.52
CSNK1D-213ENST00000580446 TEKQ02763 1124 aa11.79□□□□□ -0.52
CSNK1D-213ENST00000580446 LCP2Q13094 533 aa11.79□□□□□ -0.52
CSNK1D-213ENST00000580446 CEACAM7Q14002 265 aa11.79□□□□□ -0.52
CSNK1D-213ENST00000580446 OR7A5Q15622 319 aa11.79□□□□□ -0.52
CSNK1D-213ENST00000580446 CEACAM16Q2WEN9 425 aa11.79□□□□□ -0.52
CSNK1D-213ENST00000580446 NSUN5P1Q3KNT7 163 aa11.79□□□□□ -0.52
CSNK1D-213ENST00000580446 NRN1LQ496H8 165 aa11.79□□□□□ -0.52
CSNK1D-213ENST00000580446 POU5F2Q8N7G0 328 aa11.79□□□□□ -0.52
CSNK1D-213ENST00000580446 ICA1LQ8NDH6 482 aa11.79□□□□□ -0.52
CSNK1D-213ENST00000580446 ZNF483Q8TF39 744 aaPredicted RBP11.79□□□□□ -0.52
CSNK1D-213ENST00000580446 SNX33Q8WV41 574 aa11.79□□□□□ -0.52
CSNK1D-213ENST00000580446 CDKL2Q92772 493 aa11.79□□□□□ -0.52
CSNK1D-213ENST00000580446 RBMXL1Q96E39 390 aaKnown RBP11.79□□□□□ -0.52
CSNK1D-213ENST00000580446 KCNA7Q96RP8 456 aa11.79□□□□□ -0.52
CSNK1D-213ENST00000580446 TRIM31Q9BZY9 425 aa11.79□□□□□ -0.52
CSNK1D-213ENST00000580446 HOXD1Q9GZZ0 328 aa11.79□□□□□ -0.52
CSNK1D-213ENST00000580446 PRDM13Q9H4Q3 707 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms